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Aliases for NMTRQ-TTG6-1 Gene

Subcategory (RNA class) for NMTRQ-TTG6-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for NMTRQ-TTG6-1 Gene

  • Nuclear-Encoded Mitochondrial Transfer RNA-Gln (TTG) 6-1 2 3
  • Transfer RNA Glutamine 47 (Anticodon UUG) Pseudogene 2 3
  • Nmt-TRNA-Gln-TTG-6-1 3
  • TRNAQ47P 3

External Ids for NMTRQ-TTG6-1 Gene

Previous HGNC Symbols for NMTRQ-TTG6-1 Gene

  • TRNAQ47P

Summaries for NMTRQ-TTG6-1 Gene

GeneCards Summary for NMTRQ-TTG6-1 Gene

NMTRQ-TTG6-1 (Nuclear-Encoded Mitochondrial Transfer RNA-Gln (TTG) 6-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NMTRQ-TTG6-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NMTRQ-TTG6-1 Gene

Genomics for NMTRQ-TTG6-1 Gene

GeneHancer (GH) Regulatory Elements for NMTRQ-TTG6-1 Gene

Promoters and enhancers for NMTRQ-TTG6-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I049823 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.0 -9037 6.3 HDGF PKNOX1 CLOCK ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B E2F8 NCKAP5L SMARCD1 LMBR1L FAIM2 ASIC1 DDX23 BCDIN3D-AS1 CERS5 KMT2D TUBA1A
GH12I049820 Enhancer 1 Ensembl ENCODE dbSUPER 0.8 -3.8 -3774 1.3 GATA3 USF1 GABPB1 ESR1 MAX PRDM10 SPI1 GABPA TUBA1B ASIC1 NMTRQ-TTG6-1 NCKAP5L BCDIN3D-AS1 GC12P049810
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NMTRQ-TTG6-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NMTRQ-TTG6-1 Gene

Genomic Locations for NMTRQ-TTG6-1 Gene
chr12:49,817,407-49,817,481
(GRCh38/hg38)
Size:
75 bases
Orientation:
Minus strand
chr12:50,211,190-50,211,264
(GRCh37/hg19)

Genomic View for NMTRQ-TTG6-1 Gene

Genes around NMTRQ-TTG6-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NMTRQ-TTG6-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NMTRQ-TTG6-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NMTRQ-TTG6-1 Gene

Proteins for NMTRQ-TTG6-1 Gene

Post-translational modifications for NMTRQ-TTG6-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NMTRQ-TTG6-1 Gene

Domains & Families for NMTRQ-TTG6-1 Gene

Gene Families for NMTRQ-TTG6-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NMTRQ-TTG6-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NMTRQ-TTG6-1 Gene

Function for NMTRQ-TTG6-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NMTRQ-TTG6-1 Gene

Localization for NMTRQ-TTG6-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NMTRQ-TTG6-1 Gene

Pathways & Interactions for NMTRQ-TTG6-1 Gene

SuperPathways for NMTRQ-TTG6-1 Gene

No Data Available

Interacting Proteins for NMTRQ-TTG6-1 Gene

Gene Ontology (GO) - Biological Process for NMTRQ-TTG6-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NMTRQ-TTG6-1 Gene

Drugs & Compounds for NMTRQ-TTG6-1 Gene

No Compound Related Data Available

Transcripts for NMTRQ-TTG6-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NMTRQ-TTG6-1 Gene

No ASD Table

Relevant External Links for NMTRQ-TTG6-1 Gene

GeneLoc Exon Structure for
NMTRQ-TTG6-1
ECgene alternative splicing isoforms for
NMTRQ-TTG6-1

No data available for mRNA/cDNA for NMTRQ-TTG6-1 Gene

Expression for NMTRQ-TTG6-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NMTRQ-TTG6-1 Gene

Orthologs for NMTRQ-TTG6-1 Gene

No data available for Orthologs and Evolution for NMTRQ-TTG6-1 Gene

Paralogs for NMTRQ-TTG6-1 Gene

No data available for Paralogs for NMTRQ-TTG6-1 Gene

Variants for NMTRQ-TTG6-1 Gene

Additional Variant Information for NMTRQ-TTG6-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NMTRQ-TTG6-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NMTRQ-TTG6-1 Gene

Disorders for NMTRQ-TTG6-1 Gene

No disorders were found for NMTRQ-TTG6-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NMTRQ-TTG6-1 Gene

Publications for NMTRQ-TTG6-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for NMTRQ-TTG6-1 Gene

Sources for NMTRQ-TTG6-1 Gene

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