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Aliases for NMTRQ-TTG10-1 Gene

Subcategory (RNA class) for NMTRQ-TTG10-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for NMTRQ-TTG10-1 Gene

  • Nuclear-Encoded Mitochondrial Transfer RNA-Gln (TTG) 10-1 2 3
  • Transfer RNA Glutamine 50 (Anticodon UUG) Pseudogene 2 3
  • Nmt-TRNA-Gln-TTG-10-1 3
  • TRNAQ50P 3

External Ids for NMTRQ-TTG10-1 Gene

Previous HGNC Symbols for NMTRQ-TTG10-1 Gene

  • TRNAQ50P

Summaries for NMTRQ-TTG10-1 Gene

GeneCards Summary for NMTRQ-TTG10-1 Gene

NMTRQ-TTG10-1 (Nuclear-Encoded Mitochondrial Transfer RNA-Gln (TTG) 10-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NMTRQ-TTG10-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NMTRQ-TTG10-1 Gene

Genomics for NMTRQ-TTG10-1 Gene

Regulatory Elements for NMTRQ-TTG10-1 Gene

Enhancers for NMTRQ-TTG10-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H036067 0.4 ENCODE 0.7 -4.4 -4420 5 GATA3 FEZF1 DCLK1 SOHLH2 CCDC169 RFXAP NMTRQ-TTG10-1
GH13H036074 0.6 FANTOM5 ENCODE 0.4 -9.3 -9261 0 POLR2A CCNA1 DCLK1 CCDC169 NMTRQ-TTG10-1
GH13H036130 1.1 ENCODE dbSUPER 0.2 -66.0 -65970 2 MXI1 KLF1 ZNF777 ZSCAN4 SIN3A ZNF140 HIC1 E2F1 ZNF121 ZFHX2 SOHLH2 EXOSC8 CCDC169 RFXAP SUPT20H DCLK1 NMTRQ-TTG10-1
GH13H036082 0.4 ENCODE 0.4 -17.3 -17328 1 FOS SOHLH2 CCDC169 NMTRQ-TTG10-1 DCLK1
GH13H036096 0.4 ENCODE 0.3 -30.9 -30889 0 NR2F1 DCLK1 RFXAP NMTRQ-TTG10-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NMTRQ-TTG10-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NMTRQ-TTG10-1 Gene

Chromosome:
13
Start:
36,065,610 bp from pter
End:
36,065,681 bp from pter
Size:
72 bases
Orientation:
Minus strand

Genomic View for NMTRQ-TTG10-1 Gene

Genes around NMTRQ-TTG10-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NMTRQ-TTG10-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NMTRQ-TTG10-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NMTRQ-TTG10-1 Gene

Proteins for NMTRQ-TTG10-1 Gene

Post-translational modifications for NMTRQ-TTG10-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NMTRQ-TTG10-1 Gene

Domains & Families for NMTRQ-TTG10-1 Gene

Gene Families for NMTRQ-TTG10-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NMTRQ-TTG10-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NMTRQ-TTG10-1 Gene

Function for NMTRQ-TTG10-1 Gene

Phenotypes From GWAS Catalog for NMTRQ-TTG10-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for NMTRQ-TTG10-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NMTRQ-TTG10-1 Gene

Localization for NMTRQ-TTG10-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NMTRQ-TTG10-1 Gene

Pathways & Interactions for NMTRQ-TTG10-1 Gene

SuperPathways for NMTRQ-TTG10-1 Gene

No Data Available

Interacting Proteins for NMTRQ-TTG10-1 Gene

Gene Ontology (GO) - Biological Process for NMTRQ-TTG10-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NMTRQ-TTG10-1 Gene

Drugs & Compounds for NMTRQ-TTG10-1 Gene

No Compound Related Data Available

Transcripts for NMTRQ-TTG10-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for NMTRQ-TTG10-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for NMTRQ-TTG10-1 Gene

No ASD Table

Relevant External Links for NMTRQ-TTG10-1 Gene

GeneLoc Exon Structure for
NMTRQ-TTG10-1
ECgene alternative splicing isoforms for
NMTRQ-TTG10-1

No data available for mRNA/cDNA for NMTRQ-TTG10-1 Gene

Expression for NMTRQ-TTG10-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NMTRQ-TTG10-1 Gene

Orthologs for NMTRQ-TTG10-1 Gene

No data available for Orthologs and Evolution for NMTRQ-TTG10-1 Gene

Paralogs for NMTRQ-TTG10-1 Gene

No data available for Paralogs for NMTRQ-TTG10-1 Gene

Variants for NMTRQ-TTG10-1 Gene

Relevant External Links for NMTRQ-TTG10-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NMTRQ-TTG10-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NMTRQ-TTG10-1 Gene

Disorders for NMTRQ-TTG10-1 Gene

No disorders were found for NMTRQ-TTG10-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NMTRQ-TTG10-1 Gene

Publications for NMTRQ-TTG10-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for NMTRQ-TTG10-1 Gene

Sources for NMTRQ-TTG10-1 Gene

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