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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

NMNAT1 Gene

protein-coding   GIFtS: 65
GCID: GC01P010003

nicotinamide nucleotide adenylyltransferase 1

(Previous name: nicotinamide nucleotide adenylyltransferase )
 Explore 6 diseases affiliated with
NMNAT1 via our new
 Human Malady Compendium 
Biological research products
for NMNAT1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Nicotinamide Nucleotide Adenylyltransferase 11 2     Nicotinamide Nucleotide Adenylyltransferase1
NMNAT1 2 3     LCA92
PNAT11 2     Nicotinamide Mononucleotide Adenylyltransferase 12
Nicotinate-Nucleotide Adenylyltransferase 12 3     Pyridine Nucleotide Adenylyltransferase 12
NaMN Adenylyltransferase 12 3     EC 2.7.7.13
NMN Adenylyltransferase 12 3     EC 2.7.7.183

External Ids:    HGNC: 178771   Entrez Gene: 648022   Ensembl: ENSG000001736147   OMIM: 6087005   UniProtKB: Q9HAN93   

Export aliases for NMNAT1 gene to outside databases

Previous GC identifers: GC01P009612 GC01P009713 GC01P009938 GC01P009158


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for NMNAT1:
This gene encodes an enzyme which catalyzes a key step in the biosynthesis of the coenzyme NAD. The encoded protein is
one of several nicotinamide nucleotide adenylyltransferases. Studies in Drosophila and mammalian neurons have shown
the encoded protein can confer protection to damaged neurons. This protection requires enzymatic activity which
increases NAD levels and activates a nuclear deacetylase which is the protective molecule. Pseudogenes of this gene
are located on chromosomes 1, 3, 4, 14 and 15. (provided by RefSeq, Dec 2011)

UniProtKB/Swiss-Prot: NMNA1_HUMAN, Q9HAN9
Function: Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated
form; nicotinic acid mononucleotide (NaMN) as substrate with the same efficiency. Can use triazofurin monophosphate
(TrMP) as substrate. Also catalyzes the reverse reaction, i.e. the pyrophosphorolytic cleavage of NAD(+). For the
pyrophosphorolytic activity, prefers NAD(+) and NAAD as substrates and degrades NADH, nicotinic acid adenine
dinucleotide phosphate (NHD) and nicotinamide guanine dinucleotide (NGD) less effectively. Fails to cleave
phosphorylated dinucleotides NADP(+), NADPH and NAADP(+). Protects against axonal degeneration following mechanical or
toxic insults

Gene Wiki entry for NMNAT1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000001.10  NC_018912.1  NT_021937.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the NMNAT1 gene promoter:
         HOXA9B   HOXA9   GR   Sox5   ISGF-3   POU6F1 (c2)   CREB   GR-alpha   Meis-1a   Meis-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidNMNAT1 promoter sequence
   Search SABiosciences Chromatin IP Primers for NMNAT1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NMNAT1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1p36.22   Ensembl cytogenetic band:  1p36.22   HGNC cytogenetic band: 1p36.22

NMNAT1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
NMNAT1 gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01P010003:  view genomic region     (about GC identifiers)

Start:
10,003,486 bp from pter      End:
10,045,559 bp from pter
Size:
42,074 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: NMNA1_HUMAN, Q9HAN9 (See protein sequence)
Recommended Name: Nicotinamide mononucleotide adenylyltransferase 1  
Size: 279 amino acids; 31932 Da
Cofactor: Divalent metal cations. Zinc confers higher activity as compared to magnesium
Subunit: Homohexamer. Interacts with ADPRT/PARP1
Subcellular location: Nucleus
5 PDB 3D structures from and Proteopedia for NMNAT1:
1GZU (3D)        1KKU (3D)        1KQN (3D)        1KQO (3D)        1KR2 (3D)    
Secondary accessions: B1AN63 Q8TAE9 Q9H247 Q9H6B6

Explore the universe of human proteins at neXtProt for NMNAT1: NX_Q9HAN9

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9HAN9

  • NMNAT1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_073624.2  
    ENSEMBL proteins: 
     ENSP00000385131   ENSP00000366410   ENSP00000435134   ENSP00000467340  
    Reactome Protein details: Q9HAN9
    Human Recombinant Protein Products: 
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    ProSpec Recombinant Protein for NMNAT1
    Uscn Proteins for NMNAT1

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA11248244
    GO:0005654nucleoplasm TAS--


    NMNAT1 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    NMNAT1 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR014729 Rossmann-like_a/b/a_fold
     IPR004821 Cyt_trans-like
     IPR005248 NAMN_adtrnsfrase

    Graphical View of Domain Structure for InterPro Entry Q9HAN9

    ProtoNet protein and cluster: Q9HAN9

    1 Blocks protein family: IPB004820 Cytidylyltransferase

    UniProtKB/Swiss-Prot: NMNA1_HUMAN, Q9HAN9
    Similarity: Belongs to the eukaryotic NMN adenylyltransferase family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: NMNA1_HUMAN, Q9HAN9
    Function: Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated
    form; nicotinic acid mononucleotide (NaMN) as substrate with the same efficiency. Can use triazofurin monophosphate
    (TrMP) as substrate. Also catalyzes the reverse reaction, i.e. the pyrophosphorolytic cleavage of NAD(+). For the
    pyrophosphorolytic activity, prefers NAD(+) and NAAD as substrates and degrades NADH, nicotinic acid adenine
    dinucleotide phosphate (NHD) and nicotinamide guanine dinucleotide (NGD) less effectively. Fails to cleave
    phosphorylated dinucleotides NADP(+), NADPH and NAADP(+). Protects against axonal degeneration following mechanical or
    toxic insults
    Catalytic activity: ATP + nicotinamide ribonucleotide = diphosphate + NAD(+)
    Catalytic activity: ATP + beta-nicotinate-D-ribonucleotide = diphosphate + deamido-NAD(+)
    Enzyme regulation: Activity is strongly inhibited by galotannin. Inhibited by
    P1-(adenosine-5')-P4-(nicotinic-acid-riboside-5')-tetraphosphate (Nap4AD)
    Biophysicochemical properties: Kinetic parameters: KM=34 uM for NMN; KM=40 uM for ATP; KM=937 uM for PPi; KM=59 uM for
    NAD(+); Vmax=25 umol/min/mg enzyme for NAD synthesis; Vmax=60.5 umol/min/ug enzyme for NAD(+) cleavage; Vmax=8.5
    umol/min/ug enzyme for NADH cleavage;

    Enzyme Numbers (IUBMB): EC 2.7.7.181 EC 2.7.7.11

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    Inhib. RNA
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    Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000309nicotinamide-nucleotide adenylyltransferase activity TAS--
    GO:0004515nicotinate-nucleotide adenylyltransferase activity IDA16118205
    GO:0005515protein binding IPI19478080
    GO:0005524ATP binding IEA--
    GO:0016779nucleotidyltransferase activity ----


    NMNAT1 for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for NMNAT1:
     Increased circadian rhythm amp  Synthetic lethal with Ras 

    Animal Models:
         Mouse knock-out Nmnat1tm1.2Lcon for NMNAT1
         6 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Nmnat1):
     behavior/neurological  homeostasis/metabolism  mortality/aging  nervous system  no phenotypic analysis 
     vision/eye 

    NMNAT1 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Nicotinate metabolism
    Nicotinate metabolism1.00
    NAD salvage pathway III0.30
    NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde0.62
    NAD salvage pathway II0.18
    NAD biosynthesis III0.50
    2NAD metabolism
    NAD metabolism1.00
    Nicotinate and nicotinamide metabolism0.43
    NAD metabolism1.00
    3Metabolism
    Metabolism1.00
    Metabolic pathways0.38
    4Vitamin B5 (pantothenate) metabolism
    Metabolism of vitamins and cofactors0.21
    Metabolism of water-soluble vitamins and cofactors0.21
    5tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
    NAD biosynthesis II (from tryptophan)0.50

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for NMNAT1
        NAD metabolism


    1 GeneGo (Thomson Reuters) Pathway for NMNAT1
        NAD metabolism

    5 BioSystems Pathways for NMNAT1 
        NAD salvage pathway III
    NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
    NAD biosynthesis III
    NAD salvage pathway II
    NAD biosynthesis II (from tryptophan)

    4        Reactome Pathways for NMNAT1
        Nicotinate metabolism
    Metabolism
    Metabolism of vitamins and cofactors
    Metabolism of water-soluble vitamins and cofactors


    2         Kegg Pathways  (Kegg details for NMNAT1):
        Nicotinate and nicotinamide metabolism
    Metabolic pathways

    UniProtKB/Swiss-Prot: NMNA1_HUMAN, Q9HAN9
    Pathway: Cofactor biosynthesis; NAD(+) biosynthesis; NAD(+) from nicotinamide D-ribonucleotide: step 1/1


    NMNAT1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for NMNAT1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/47 Interacting proteins for NMNAT1 (Q9HAN91, 3 ENSP000003664104) via UniProtKB, MINT, STRING, and/or I2D (see all 47)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    OATP041813, ENSP000003578384I2D: score=6 STRING: ENSP00000357838
    WRNIP1Q96S553, ENSP000003701504I2D: score=5 STRING: ENSP00000370150
    UBCP0CG483, ENSP000003448184I2D: score=1 STRING: ENSP00000344818
    SIRT1Q96EB61, ENSP000002120154EBI-3917542,EBI-1802965 STRING: ENSP00000212015
    KPNA6O606843I2D: score=6 
    About this table

    Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006766vitamin metabolic process TAS--
    GO:0006767water-soluble vitamin metabolic process TAS--
    GO:0009435NAD biosynthetic process IEA--
    GO:0009611response to wounding IEA--
    GO:0019674NAD metabolic process TAS--


    NMNAT1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    NMNAT1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for NMNAT1

    9 HMDB Compounds for NMNAT1    About this table
    CompoundSynonyms CAS #PubMed Ids
    Adenosine triphosphate5'-(tetrahydrogen triphosphate) Adenosine (see all 24)56-65-5--
    MagnesiumMagnesium (see all 2)7439-95-4--
    NAD3-Carbamoyl-1-D-ribofuranosylpyridinium hydroxide 5'-ester with adenosine 5'-pyrophosphate (see all 28)53-84-9--
    NADH1,4-Dihydronicotinamide adenine dinucleotide (see all 17)58-68-4--
    Nicotinamide ribotide3-(aminocarbonyl)-1-(5-O-phosphono-b-D-ribofuranosyl)-Pyridinium hydroxide inner salt (see all 15)1094-61-7--
    Nicotinic acid adenine dinucleotideNAAD (see all 9)6450-77-7--
    Nicotinic acid mononucleotide3-Carboxy-1-beta-D-ribofuranosylpyridinium hydroxide 5'-phosphate inner salt (see all 23)321-02-8--
    Phosphoric acidacide phosphorique (FRENCH) (see all 20)7664-38-2--
    Pyrophosphate(4-)Diphosphoric acid ion (see all 10)14000-31-8--

    3 DrugBank Compounds for NMNAT1    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Deamido-Nad+-- --target--17139284 17016423
    Nicotinamide Mononucleotide-- --target--17139284 17016423
    Nicotinamide-Adenine-Dinucleotide-- 53-84-9target--17139284 17016423

    10 Novoseek chemical compound relationships for NMNAT1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    nicotinamide mononucleotide 96.1 24 7872964 (2), 11959140 (2), 8470897 (2), 11751893 (1) (see all 16)
    namn 95.2 10 11788603 (2), 19448972 (1), 11796112 (1), 16247974 (1) (see all 7)
    benzamide riboside 90 7 11966438 (3)
    naad 89.3 3 12117413 (1), 11788603 (1), 11796112 (1)
    tiazofurin 84 7 11788603 (2), 11966438 (2), 10390601 (1)
    nad+ 78.1 31 8572289 (2), 19478080 (2), 17402747 (1), 20457531 (1) (see all 9)
    nicotinamide 69.9 6 19448972 (1), 11788603 (1), 19478080 (1), 16914673 (1) (see all 5)
    niacin 48.7 3 8470897 (1), 16914673 (1)
    nadp+ 45 1 11788603 (1)
    atp 43.3 7 14516279 (1), 7872964 (1), 11248244 (1), 8572289 (1) (see all 5)

    Search CenterWatch for drugs/clinical trials and news about NMNAT1 / NMNA1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for NMNAT1 gene: 
    NM_022787.3  

    Unigene Cluster for NMNAT1:

    Nicotinamide nucleotide adenylyltransferase 1
    Hs.633762  [show with all ESTs]
    Unigene Representative Sequence: NM_022787
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000403197 ENST00000377205(uc001aqp.3) ENST00000462686 ENST00000492735
    ENST00000496751

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    Additional cDNA sequence: 

    AF088049.1 AF312734.1 AF314163.1 AF459819.1 AK026065.1 AK222920.1 AK315640.1 BC032483.1 

    8 DOTS entries:

    DT.100811834  DT.445517  DT.70104559  DT.206714  DT.95161661  DT.65286775  DT.100726688  DT.428038 

    24/60 AceView cDNA sequences (see all 60):

    BM693812 BI758308 AA307717 AW004846 AF314163 BF059685 AI244413 AA705016 
    AA372222 BP339298 BU173830 BG751629 BC032483 W72875 W74399 AI392757 
    BP379829 BE272001 NM_022787 AA311657 BP372963 BC014943 BX282101 BF341797 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for NMNAT1    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b
    SP1:                                      -               
    SP2:                                                      
    SP3:                                -     -               


    ECgene alternative splicing isoforms for NMNAT1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    NMNAT1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CAGGGTGGTG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See NMNAT1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for NMNAT1

    SOURCE GeneReport for Unigene cluster: Hs.633762

    UniProtKB/Swiss-Prot: NMNA1_HUMAN, Q9HAN9
    Tissue specificity: Widely expressed with highest levels in skeletal muscle, heart and kidney. Also expressed in the
    liver pancreas and placenta. Widely expressed throughout the brain

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for NMNAT1 gene from 6/25 species (see all 25)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves RBP71 retinol binding protein 7, cellular 69.35(n)
    71.79(a)
      419447  XM_417606.3  XP_417606.3 
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.157222 Xenopus laevis transcribed sequence with weak similarity more 75.52(n)    BX844470.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Nmnat6
    Nicotinamide mononucleotide adenylyltransferase
    29(a)
    1 → many
    3R(20770959-20773122)
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes NMA2(YGR010W)4
    NMA21
    Nicotinic acid mononucleotide adenylyltransferase, more4
    Nma2p1
    51.93(n)1
    46.35(a)1
      7(511545-512732)4
    8528931, 4  NP_011524.11, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons NMNAT6
    nicotinamide mononucleotide adenylyltransferase
    30(a)
    1 → many
    5(22583985-22586347)
    rice
    (Oryza sativa)
    Liliopsida Os02g08149001 hypothetical protein 50(n)
    46.36(a)
      4331124  NM_001055032.1  NP_001048497.1 


    ENSEMBL Gene Tree for NMNAT1 (if available)
    TreeFam Gene Tree for NMNAT1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for NMNAT1 gene
    NMNAT32  NMNAT22  
    2 SIMAP similar genes for NMNAT1 using alignment to 3 protein entries:     NMNA1_HUMAN (see all proteins):
    NMNAT3    NMNAT2

    NMNAT1 for paralogs           About GeneDecksing


    5 Pseudogenes.org Pseudogenes for NMNAT1
    PGOHUM00000248242 PGOHUM00000247137 PGOHUM00000245053 PGOHUM00000238298 PGOHUM00000246097


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/718 NCBI SNPs in NMNAT1 are shown (see all 718    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1921647321,2
    --10001516(+) CCAAAA/TTGCTG 2 -- us2k1 int10--------
    rs1849173601,2
    --10001518(+) AAAATA/GCTGGG 2 -- int1 us2k10--------
    rs1877789461,2
    --10001675(+) GCCTCA/GGCCTC 2 -- us2k1 int10--------
    rs1922131071,2
    --10001677(+) CTCGGA/CCTCCC 2 -- int1 us2k10--------
    rs1846658201,2
    --10001698(+) GATTAC/TAGGCA 2 -- us2k1 int10--------
    rs1408523341,2
    --10001911(+) AGTGCC/TGAATA 2 -- int1 us2k10--------
    rs583421831,2
    C,--10001963(+) TTAGCA/TTTCAA 2 -- us2k1 int12Minor allele frequency- T:0.03WA 120
    rs782226071,2
    C--10001972(+) AAATC-/TTTTTT 2 -- int1 us2k10--------
    rs12204241,2
    C,F,A,H,--10001980(-) ATTTTT/AAAAAA 2 -- int1 us2k1 trp37Minor allele frequency- A:0.47NA WA EA 366
    rs1119997621,2
    C,--10001981(+) TTTTTA/TAAATT 2 -- us2k1 int12Minor allele frequency- T:0.21WA 120

    HapMap Linkage Disequilibrium report for NMNAT1 (10003486 - 10045559 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for NMNAT1: --
    Human Gene Mutation Database (HGMD): NMNAT1

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    NMNAT1 for disorders           About GeneDecksing

    OMIM gene information: 608700    OMIM disorders: --

    UniProtKB/Swiss-Prot: NMNA1_HUMAN, Q9HAN9
  • Defects in NMNAT1 are the cause of Leber congenital amaurosis 9 (LCA9) [MIM:608553]. A severe dystrophy of the
  • retina, typically becoming evident in the first years of life. Visual function is usually poor and often accompanied
    by nystagmus, sluggish or near-absent pupillary responses, photophobia, high hyperopia and keratoconus

    6 diseases for NMNAT1:    About MalaCards
    wallerian degeneration    neuronitis    neurodegenerative disease    neurodegeneration
    neuropathy    leukemia

    1 disease from the University of Copenhagen DISEASES database for NMNAT1:
    Leber congenital amaurosis

    2 Novoseek disease relationships for NMNAT1 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    wallerian degeneration 71 3 20126265 (1), 17113230 (1)
    neurodegenerative diseases 36.5 3 17113230 (1), 19355893 (1)

    Human Genome Epidemiology (HuGE) Navigator: NMNAT1 (4 documents)

    Export disorders for NMNAT1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for NMNAT1 gene, integrated from 9 sources (see all 73):
    (articles sorted by number of sources associating them with NMNAT1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Characterization of recombinant human nicotinamide mononucleotide adenylyl transferase (NMNAT), a nuclear enzyme essential for NAD synthesis. (PubMed id 11248244)1, 2, 3, 9 Schweiger M.... Ziegler M. (2001)
    2. Molecular cloning, chromosomal localization, tissue mRNA levels, bacterial expression, and enzymatic properties of human NMN adenylyltransferase. (PubMed id 11027696)1, 2, 3, 9 Emanuelli M....Magni G. (2001)
    3. Structure of human nicotinamide/nicotinic acid mononucleotide adenylyltransferase. Basis for the dual substrate specificity and activation of the oncolytic agent tiazofurin. (PubMed id 11788603)1, 2, 9 Zhou T.... Zhang H. (2002)
    4. Crystal structure of human nicotinamide mononucleotide adenylyltransferase in complex with NMN. (PubMed id 11959140)1, 2, 9 Werner E.... Heinemann U. (2002)
    5. Structure of human NMN adenylyltransferase. A key nuclear enzyme for NAD homeostasis. (PubMed id 11751893)1, 2, 9 Garavaglia S.... Rizzi M. (2002)
    6. Initial-rate kinetics of human NMN-adenylyltransferases: substrate and metal ion specificity, inhibition by products and multisubstrate analogues, and isozyme contributions to NAD+ biosynthesis. (PubMed id 17402747)1, 2, 9 Sorci L.... Magni G. (2007)
    7. Subcellular compartmentation and differential catalytic properties of the three human nicotinamide mononucleotide adenylyltransferase isoforms. (PubMed id 16118205)1, 2, 9 Berger F.... Ziegler M. (2005)
    8. Human homologue of a gene mutated in the slow Wallerian degeneration (C57BL/Wld(s)) mouse. (PubMed id 11891043)1, 2, 9 Fernando F.S.... Coleman M.P. (2002)
    9. Mutations in NMNAT1 cause Leber congenital amaurosis and identify a new disease pathway for retinal degeneration. (PubMed id 22842230)1, 2 Koenekoop R.K.... Chen R. (2012)
    10. Mutations in NMNAT1 cause Leber congenital amaurosis with early-onset severe macular and optic atrophy. (PubMed id 22842229)1, 2 Perrault I.... Rozet J.M. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
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    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 64802 HGNC: 17877 AceView: NMNAT1 Ensembl:ENSG00000173614 euGenes: HUgn64802
    ECgene: NMNAT1 Kegg: 64802 H-InvDB: NMNAT1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for NMNAT1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for NMNAT1 gene:
    Search GeneIP for patents involving NMNAT1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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