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Aliases & Descriptions for NME2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 2.7.4.6 3 MGC111212 2 NDPK-B 2 NDPKB 2 NM23-H2 1 , 2 NM23B 2 , 3 OTTHUMP00000174727 2 OTTHUMP00000174728 2 OTTHUMP00000174774 2 OTTHUMP00000174775 2 OTTHUMP00000174776 2 nm23-H2 3 puf 2
Descriptions C-myc purine-binding transcription factor PUF 3 NDK B 3 NDP kinase B 2 , 3 c-myc transcription factor 2 non-metastatic cells 2, protein (NM23) expressed in 2 non-metastatic cells 2, protein (NM23B) expressed in 2 nucleoside diphosphate kinase B 2
Search outside databases for aliases for NME2 genePrevious GC identifers: GC17U990063 GC17P051725 GC17P049584 GC17P049718
Summaries for NME2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for NME2 : Nucleoside diphosphate kinase (NDK) exists as a hexamer composed of 'A' (encoded by NME1)and 'B' (encoded by this gene) isoforms. Multiple alternatively spliced transcriptvariants encoding the same isoform have been found for this gene. Co-transcription of this geneand the neighboring upstream gene (NME1) generates naturally-occurring transcripts (NME1-NME2)which encode a fusion protein comprised of sequence sharing identity with each individual geneproduct. [provided by RefSeq] UniProtKB/Swiss-Prot: NDKB_HUMAN, P22392 Function : Major role in the synthesis of nucleoside triphosphates other than ATP. Negativelyregulates Rho activity by interacting with AKAP13/LBC. Acts as a transcriptional activator of thec-Myc gene; binds DNA non-specifically (PubMed:8392752)
Gene Wiki entry for NME2
Genomic Location for NME2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the NME2 gene Entrez Gene cytogenetic band: 17q21.3 Ensembl cytogenetic band: 17q21.33 HGNC cytogenetic band: 17q21.33 NME2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure
GeneLoc location for GC17P046598:
(about GC identifiers )
Start:
46,585,919 bp from pter
End:
46,604,104 bp from pter
Size:
18,186 bases
Orientation:
plus strand
Proteins for NME2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: NDKB_HUMAN, P22392 (See
protein sequence )Recommended Name: Nucleoside diphosphate kinase B Size : 152 amino acids; 17298 Da
Cofactor : Magnesium (By similarity)
Subunit : Hexamer of two different chains: A and B (A6, A5B, A4B2, A3B3, A2B4, AB5, B6). Interactswith CAPN8 (By similarity). Interacts with AKAP13
Subcellular location : Cytoplasm. Nucleus. Note=Isoform 2 is mainly cytoplasmic and isoform 1 andisoform 2 are excluded from the nucleolus
PDB structures from and Proteopedia : 1NSK (3D)
 1NUE (3D)
 3BBB (3D)
 3BBC (3D)
 3BBF (3D)
 
Secondary accessions : A8MWA3 Q1WM23 Q6LCT6Alternative splicing : 2 isoforms : P22392-1 P22392-2
Post-translational modifications:
The N-terminus is blocked1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (4 alternative transcripts):
NP_001018147.1 NP_001018148.1 NP_001018149.1 NP_002503.1 ENSEMBL proteins: ENSP00000376895 ENSP00000376894 ENSP00000312446 ENSP00000337060 ENSP00000013034 ENSP00000365572 ENSP00000376892 ENSP00000376888 ENSP00000376890 ENSP00000376889 ENSP00000376887 ENSP00000376886 ENSP00000376880 ENSP00000376882 Human Recombinant Proteins                OriGene Purified Recombinant Human Proteins (see all 2 ): NME2 4 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for NME2: Assays for NME2:
Protein
Domains/ Families for NME2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P22392 ProtoNet protein and cluster: P22392
1 Blocks protein family : IPB001564 Nucleoside diphosphate kinase UniProtKB/Swiss-Prot: NDKB_HUMAN, P22392 Similarity : Belongs to the NDK family
Gene Function for NME2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_002512 Applied Biosystems Silencer ® siRNAs for NME2 Sigma-Aldrich siRNA for NME2 Sigma-Aldrich shRNA Panels and shRNA for NME2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_001018137                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_001018137                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_001018137  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001018139 UniProtKB/Swiss-Prot: NDKB_HUMAN, P22392 Function : Major role in the synthesis of nucleoside triphosphates other than ATP. Negativelyregulates Rho activity by interacting with AKAP13/LBC. Acts as a transcriptional activator of thec-Myc gene; binds DNA non-specifically (PubMed:8392752) Catalytic activity : ATP + nucleoside diphosphate = ADP + nucleoside triphosphateEnzyme Number (IUBMB): EC 2.7.4.6
Genatlas biochemistry entry for NME2 :non-metastatic cells 2,protein,with a nm23 nucleoside diphosphate kinase gene family,involved inthe phosphorylation of nucleoside diphosphates and acting as a transcription regulator formyc,pyrimidine biosynthetic pathway
6 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Nme2) :5/8 Gene Ontology (GO) molecular function terms (links to tree view) (see all 8
):
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Pathways & Interactions for NME2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for NME2 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for NME2 5/86 Interacting proteins for NME2 (ENSP00000365572 3 P22392 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 86
)About this table 5/14 Gene Ontology (GO) biological process terms (links to tree view) (see all 14
):
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Drugs & Compounds for NME2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for NME2 6 Novoseek chemical compound relationships for NME2 gene
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Transcripts for NME2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_002512 Sigma-Aldrich siRNA for NME2 Sigma-Aldrich shRNA Panels and shRNA for NME2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001018137 NM_001018138 NM_001018139 NM_002512
REFSEQ mRNAs for NME2 gene (4 alternative transcripts): NM_001018137.1 NM_001018138.1 NM_001018139.1 NM_002512.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001018137 NM_001018138 NM_001018139 NM_002512
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_001018137                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_001018137                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_001018137  
24/233 AceView cDNA sequences (see all 233
):BQ678803 X17620 CB163460 BI858006 CB108710 AA373087 BM765413 BM552890 BU165414 CD109158 BE905337 BE784067 AU098718 BQ925648 AA368995 NM_000269 BG033447 CA449399 BQ435141 AI708633 BM846125 BU615517 AW768951 BM554149
highest scoring ESTs for NME2 :BF229291 F24128 X58965 F22253 AA761011 AW273877 BG164775 BM990296 BQ231394 F33510 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for NME2 (see all 7
) ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b ^ 4a · 4b · 4c ^ 5 ^ 6a · 6b · 6c ^ 7a · 7b · 7c SP1 :       -   -         -     -     -         SP2 :       -   -   -       -     -     -         SP3 :       -   -   -       -         -         SP4 :         -         -     -             SP5 :       -   -   -       -     -            
About this scheme ECgene alternative splicing isoforms for NME2 14 Ensembl transcripts including schematic representations : ENST00000393199
ENST00000393198
ENST00000311032
ENST00000336097
ENST00000013034
ENST00000376392
ENST00000393196
ENST00000393192
ENST00000393194
ENST00000393193
ENST00000393191
ENST00000393190
ENST00000393183
ENST00000393185
Expression for NME2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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NME2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for NME2 1 / 2 / 3
4 probe-sets matching NME2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: ACTGGGTCTAExpression variation in blood from EXPOLDB for NME2
UniProtKB/Swiss-Prot: NDKB_HUMAN, P22392 Tissue specificity : Ubiquitously expressed
Orthologs for NME2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for NME2 gene from 5/23 species (see all 23
)
About this table Species with no ortholog for NME2 ENSEMBL Gene Tree for NME2 Paralogs for NME2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for NME2 gene NME2P1 2 NME3 2 NME7 2 NME4 2 Pseudogenes 1 related pseudogene
SNPs/Variants for NME2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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Disorders & Mutations for NME2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 156491 UniProtKB/Swiss-Prot: NDKB_HUMAN, P22392
This protein is found in reduced amount in tumor cells of high metastatic potential
10/13 Novoseek disease relationships for NME2 gene (see all 13
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
burkitt lymphoma
44.63
2
7768941 (2)
tumors
24.18
8
12011429 (1), 7896455 (1), 8601634 (1), 12769686 (1) (see all 7 )
cancer
24.09
3
8392752 (1), 17982115 (1), 9619879 (1)
metastasis
15.54
4
8392752 (1), 10632374 (1), 7479028 (1), 9368387 (1)
nasopharyngeal carcinoma
12.69
1
17156515 (1)
breast cancer
10.08
3
17170079 (1), 10713695 (1), 18586674 (1)
cervical carcinoma
9.63
2
8392752 (1)
shock
0.00
2
10946852 (1), 15149734 (1)
melanoma
0.00
1
10400630 (1)
glioma
0.00
1
11857388 (1)
About this table 1 PharmGKB disease relationship for NME2 gene About this table
Medical News for NME2 (Possibly Related Articles in
Doctor's Guide )
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Publications for NME2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/156 PubMed articles for NME2 gene (see all 156
): Identification of a second human nm23 gene, nm23-H2. (PubMed id 1988104) 2, 3, 4 Stahl J.A.... King C.R. (1991) Human c-myc transcription factor PuF identified as nm23-H2 nucleoside diphosphate kinase, a candidate suppressor of tumor metastasis. (PubMed id 8392752) 1, 3, 4 Postel E.H.... Ferrone C.A. (1993) X-ray structure of human nucleoside diphosphate kinase B complexed with GDP at 2-A resolution. (PubMed id 8747457) 1, 3, 4 Morera S.... Janin J. (1995) Lbc proto-oncogene product binds to and could be negatively regulated by metastasis suppressor nm23-H2. (PubMed id 15249197) 3, 4 Iwashita S.... Miyamoto M. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Characterization of the human nm23-H2 promoter region and localization of the microsatellite D17S396. (PubMed id 7488060) 3, 4 Seifert M.... Welter C. (1995) The crystal structure of a human nucleoside diphosphate kinase, NM23- H2. (PubMed id 7658474) 3, 4 Webb P.A.... Williams R.L. (1995) Nucleoside diphosphate kinase from human erythrocytes. Structural characterization of the two polypeptide chains responsible for heterogeneity of the hexameric enzyme. (PubMed id 1851158) 3, 4 Gilles A.-M.... Lascu I. (1991) Localization of a second NM23 gene, NME2, to chromosome 17q21-q22. (PubMed id 8406509) 1, 3 Kelsell D.P....Spurr N.K. (1993) The transcription factor, Nm23H2, binds to and activates the translocated c-myc allele in Burkitt's lymphoma. (PubMed id 7768941) 1, 3 Ji L....Boxer L.M. (1995)
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Genome Databases showing NME2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing NME2
(According to HUGE )
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Specialized Databases showing NME2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for NME2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for NME2:
Recombinant Proteins (NME2 ) Antibodies (NME2 )
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009