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Aliases for NME1-NME2 Gene

Aliases for NME1-NME2 Gene

  • NME1-NME2 Readthrough 2 3 5
  • NME1-NME2 Readthrough Transcript 3
  • NME1-NME2 Protein 3
  • NM23-LV 3
  • NMELV 3

External Ids for NME1-NME2 Gene

Previous GeneCards Identifiers for NME1-NME2 Gene

  • GC17U900586
  • GC17P046586
  • GC17P049230
  • GC17P044600

Summaries for NME1-NME2 Gene

Entrez Gene Summary for NME1-NME2 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring NME1 and NME2 genes. The significance of this read-through transcription and the function of the resulting protein product have not yet been determined. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Nov 2010]

GeneCards Summary for NME1-NME2 Gene

NME1-NME2 (NME1-NME2 Readthrough) is a Protein Coding gene. Diseases associated with NME1-NME2 include Bladder Disease and Radiation Cystitis. Among its related pathways are superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis and Pyrimidine metabolism (KEGG). GO annotations related to this gene include transcription factor activity, sequence-specific DNA binding and protein histidine kinase activity. An important paralog of this gene is NME2.

Gene Wiki entry for NME1-NME2 Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NME1-NME2 Gene

Genomics for NME1-NME2 Gene

Regulatory Elements for NME1-NME2 Gene

Enhancers for NME1-NME2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around NME1-NME2 on UCSC Golden Path with GeneCards custom track

Promoters for NME1-NME2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around NME1-NME2 on UCSC Golden Path with GeneCards custom track

Genomic Location for NME1-NME2 Gene

Chromosome:
17
Start:
51,153,536 bp from pter
End:
51,171,744 bp from pter
Size:
18,209 bases
Orientation:
Plus strand

Genomic View for NME1-NME2 Gene

Genes around NME1-NME2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NME1-NME2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NME1-NME2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NME1-NME2 Gene

Proteins for NME1-NME2 Gene

  • Protein details for NME1-NME2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    J3KPD9
    Recommended name:
    Protein NME1-NME2
    Protein Accession:
    J3KPD9

    Protein attributes for NME1-NME2 Gene

    Size:
    197 amino acids
    Molecular mass:
    22422 Da
    Quaternary structure:
    No Data Available
  • Protein details for NME1-NME2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q32Q12
    Recommended name:
    Nucleoside diphosphate kinase
    Protein Accession:
    Q32Q12

    Protein attributes for NME1-NME2 Gene

    Size:
    292 amino acids
    Molecular mass:
    32642 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NME1-NME2 Gene

Post-translational modifications for NME1-NME2 Gene

No Post-translational modifications

Other Protein References for NME1-NME2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for NME1-NME2 Gene

Domains & Families for NME1-NME2 Gene

Protein Domains for NME1-NME2 Gene

Suggested Antigen Peptide Sequences for NME1-NME2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NME1-NME2: view

No data available for Gene Families and UniProtKB/Swiss-Prot for NME1-NME2 Gene

Function for NME1-NME2 Gene

genes like me logo Genes that share phenotypes with NME1-NME2: view

Animal Model Products

CRISPR Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for NME1-NME2 Gene

Localization for NME1-NME2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for NME1-NME2 Gene COMPARTMENTS Subcellular localization image for NME1-NME2 gene
Compartment Confidence
extracellular 5
nucleus 5
cytosol 3
cytoskeleton 2
mitochondrion 2
plasma membrane 2
chloroplast 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for NME1-NME2 Gene

Pathways & Interactions for NME1-NME2 Gene

genes like me logo Genes that share pathways with NME1-NME2: view

Interacting Proteins for NME1-NME2 Gene

Gene Ontology (GO) - Biological Process for NME1-NME2 Gene

None

No data available for SIGNOR curated interactions for NME1-NME2 Gene

Drugs & Compounds for NME1-NME2 Gene

No Compound Related Data Available

Transcripts for NME1-NME2 Gene

mRNA/cDNA for NME1-NME2 Gene

(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NME1-NME2 Gene

No ASD Table

Relevant External Links for NME1-NME2 Gene

GeneLoc Exon Structure for
NME1-NME2
ECgene alternative splicing isoforms for
NME1-NME2

Expression for NME1-NME2 Gene

mRNA expression in normal human tissues for NME1-NME2 Gene

Protein differential expression in normal tissues from HIPED for NME1-NME2 Gene

This gene is overexpressed in Saliva (16.3) and Brain (15.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from PaxDb, MaxQB, and MOPED for NME1-NME2 Gene



Protein tissue co-expression partners for NME1-NME2 Gene

genes like me logo Genes that share expression patterns with NME1-NME2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for NME1-NME2 Gene

Orthologs for NME1-NME2 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for NME1-NME2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia LOC101905864 34
  • 74.34 (n)
  • 71.68 (a)
NME2 35
  • 96 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm5566 34
  • 89.47 (n)
  • 94.74 (a)
Gm5566 16
Gm20390 35
  • 97 (a)
ManyToMany
Nme2 35
  • 97 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia LOC101059613 34
  • 96.35 (n)
  • 94.16 (a)
-- 35
  • 92 (a)
ManyToMany
-- 35
  • 76 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia NME2 35
  • 97 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia NME2 35
  • 86 (a)
OneToMany
chicken
(Gallus gallus)
Aves NME1 35
  • 81 (a)
ManyToMany
NME2 35
  • 92 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 49 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii nme2a 34
  • 71.36 (n)
  • 79.19 (a)
CABZ01038708.1 35
  • 61 (a)
ManyToMany
nme2a 35
  • 68 (a)
ManyToMany
nme2b.2 35
  • 78 (a)
ManyToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP007120 34
  • 67.5 (n)
  • 70.62 (a)
fruit fly
(Drosophila melanogaster)
Insecta awd 34
  • 69.28 (n)
  • 72.89 (a)
awd 35
  • 68 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea ndk-1 34
  • 62.28 (n)
  • 69.08 (a)
ndk-1 35
  • 68 (a)
OneToMany
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_ABR096C 34
  • 59.91 (n)
  • 60.81 (a)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0D03696g 34
  • 60.96 (n)
  • 64.47 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes YNK1 34
  • 58.94 (n)
  • 60.26 (a)
YNK1 35
  • 60 (a)
OneToMany
YNK1 37
thale cress
(Arabidopsis thaliana)
eudicotyledons NDPK1 34
  • 61.01 (n)
  • 59.12 (a)
rice
(Oryza sativa)
Liliopsida Os10g0563700 34
  • 63.29 (n)
  • 61.49 (a)
bread mold
(Neurospora crassa)
Ascomycetes NCU04202 34
  • 64.47 (n)
  • 63.16 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes ndk1 34
  • 54.67 (n)
  • 56 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 69 (a)
OneToMany
Species where no ortholog for NME1-NME2 was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for NME1-NME2 Gene

ENSEMBL:
Gene Tree for NME1-NME2 (if available)
TreeFam:
Gene Tree for NME1-NME2 (if available)

Paralogs for NME1-NME2 Gene

Paralogs for NME1-NME2 Gene

(6) SIMAP similar genes for NME1-NME2 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for NME1-NME2 Gene

genes like me logo Genes that share paralogs with NME1-NME2: view

Variants for NME1-NME2 Gene

Sequence variations from dbSNP and Humsavar for NME1-NME2 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs4794209 -- 51,162,770(+) GGGAG(C/T)GTGGG intron-variant
rs35517913 -- 51,162,676(+) ACTGT(A/C)CTTCA intron-variant
rs78604357 -- 51,163,171(+) GTTGG(A/T)GCAGT intron-variant
rs80075032 -- 51,162,638(+) CCCAG(C/G)AGTCC intron-variant
rs140127030 -- 51,163,142(+) GAGGT(A/G)GGAGG intron-variant

Variation tolerance for NME1-NME2 Gene

Residual Variation Intolerance Score: 66.9% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for NME1-NME2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NME1-NME2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for NME1-NME2 Gene

Disorders for NME1-NME2 Gene

MalaCards: The human disease database

(3) MalaCards diseases for NME1-NME2 Gene - From: DISEASES

Disorder Aliases PubMed IDs
bladder disease
  • urinary bladder disease
radiation cystitis
  • irradiation cystitis
lung sarcoma
  • pulmonary sarcoma
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for NME1-NME2

Genetic Association Database (GAD)
NME1-NME2
Human Genome Epidemiology (HuGE) Navigator
NME1-NME2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NME1-NME2
genes like me logo Genes that share disorders with NME1-NME2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for NME1-NME2 Gene

Publications for NME1-NME2 Gene

  1. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson S.L. … O'Brien S.J. (PLoS ONE 2010) 3 46 65
  2. Read-through transcript from NM23-H1 into the neighboring NM23-H2 gene encodes a novel protein, NM23-LV. (PMID: 16442775) Valentijn L.J. … Versteeg R. (Genomics 2006) 2 3 65
  3. Quantitative Proteomics Reveals Dynamic Interactions of the Minichromosome Maintenance Complex (MCM) in the Cellular Response to Etoposide Induced DNA Damage. (PMID: 25963833) Drissi R. … Boisvert F.M. (Mol. Cell Proteomics 2015) 3 65
  4. Panorama of ancient metazoan macromolecular complexes. (PMID: 26344197) Wan C. … Emili A. (Nature 2015) 3 65
  5. A high-throughput approach for measuring temporal changes in the interactome. (PMID: 22863883) Kristensen A.R. … Foster L.J. (Nat. Methods 2012) 3 65

Products for NME1-NME2 Gene

Sources for NME1-NME2 Gene

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