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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

NLK Gene

protein-coding   GIFtS: 62
GCID: GC17P026369

nemo-like kinase

(Previous name: nemo like kinase )
 Explore 12 diseases affiliated with
NLK via our new
 Human Malady Compendium 
Biological research products
for NLK
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Nemo-Like Kinase1 2 3     LAK13
EC 2.7.11.243 8     Protein LAK13
Nemo Like Kinase1     EC 2.7.118
Serine/Threonine-Protein Kinase NLK2     

External Ids:    HGNC: 298581   Entrez Gene: 517012   Ensembl: ENSG000000870957   OMIM: 6094765   UniProtKB: Q9UBE83   

Export aliases for NLK gene to outside databases

Previous GC identifers: GC17P026225 GC17P028269 GC17P026515 GC17P026514 GC17P023393 GC17P022577


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: NLK_HUMAN, Q9UBE8
Function: Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate
determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1
and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1.
The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone
H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and
promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin
signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the
TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together
these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of
the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a
transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of
transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and
MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by
direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in
turn required for activation of NLK by MAP3K7/TAK1

Gene Wiki entry for NLK


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000017.10  NC_018928.1  NT_010799.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the NLK gene promoter:
         E2F-4   E2F-3a   E2F-5   p300   E2F-2   PPAR-gamma1   E2F   PPAR-gamma2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): NLK promoter sequence
   Search SABiosciences Chromatin IP Primers for NLK

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NLK


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17q11.2   Ensembl cytogenetic band:  17q11.2   HGNC cytogenetic band: 17q11.2

NLK Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
NLK gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17P026369:  view genomic region     (about GC identifiers)

Start:
26,368,763 bp from pter      End:
26,523,407 bp from pter
Size:
154,645 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: NLK_HUMAN, Q9UBE8 (See protein sequence)
Recommended Name: Serine/threonine-protein kinase NLK  
Size: 527 amino acids; 58283 Da
Cofactor: Magnesium (By similarity)
Subunit: Homodimer. Homodimerization is required for intermolecular autophosphorylation, kinase activation and nuclear
localization (By similarity). May interact with components of cullin-RING-based SCF (SKP1-CUL1-F-box protein) E3
ubiquitin-protein ligase complexes (By similarity). Interacts with LEF1, MEF2A, MYBL1 and MYBL2 (By similarity).
Interacts with the upstream activating kinases HIPK2 and MAP3K7/TAK1. Interaction with MAP3K7/TAK1 seems to be
indirect, and may be mediated by other proteins such as STAT3, TAB1 and TAB2. Interacts with and phosphorylates a
number of transcription factors including FOXO1, FOXO3, FOXO4, MYB, NOTCH1 and TCF7L2/TCF4. Interacts with DAPK3/ZIPK,
and this interaction may disrupt interaction with transcription factors such as TCF7L2/TCF4. Forms a transcriptional
repressor complex with CHD7, PPARG and SETDB1. Interacts with RNF138/NARF
Subcellular location: Nucleus (By similarity). Cytoplasm (By similarity). Note=Predominantly nuclear. A smaller
fraction is cytoplasmic (By similarity)
Sequence caution: Sequence=AAD56013.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Sequence=AAF04857.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=ABC40748.1;
Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=BAG37718.1; Type=Erroneous initiation;
Note=Translation N-terminally extended;
Secondary accessions: B2RCX1 Q2PNI9 Q6P2A3

Explore the universe of human proteins at neXtProt for NLK: NX_Q9UBE8

Post-translational modifications:

  • Phosphorylated on Thr-298. Intermolecular autophosphorylation on Thr-298 activates the enzyme1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9UBE8

  • 4/14 DME Specific Peptides for NLK (Q9UBE8) (see all 14)
     FDPSKRI  TDLLGTP  LKICDFG  HRDIKPGN 

    NLK Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_057315.3  
    ENSEMBL proteins: 
     ENSP00000384625   ENSP00000464656   ENSP00000433117  

    Human Recombinant Protein Products: 
    EMD Millipore Purified and/or Recombinant NLK Protein
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: NLK
    OriGene Protein Over-expression Lysate: NLK
    OriGene Custom Protein Services for NLK 
    GenScript Custom Purified and Recombinant Proteins Services for NLK
    Novus Biologicals NLK Proteins
    Novus Biologicals NLK Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for NLK

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus ISS--
    GO:0005737cytoplasm IEA--


    NLK for ontologies           About GeneDecksing



    NLK Antibody Products: 
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    Novus Biologicals NLK Antibodies
    Abcam antibodies for NLK 
    Uscn Antibodies for NLK
    ThermoFisher Antibody for NLK

    Assay Products for NLK: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for NLK
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for NLK


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    NLK for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR017441 Protein_kinase_ATP_BS
     IPR002290 Ser/Thr_dual-sp_kinase_dom
     IPR011009 Kinase-like_dom
     IPR008271 Ser/Thr_kinase_AS
     IPR003527 MAP_kinase_CS

    Graphical View of Domain Structure for InterPro Entry Q9UBE8

    ProtoNet protein and cluster: Q9UBE8

    1 Blocks protein family: IPB003527 MAP kinase

    UniProtKB/Swiss-Prot: NLK_HUMAN, Q9UBE8
    Domain: Contains a TQE activation loop motif in which autophosphorylation of the threonine residue (Thr-298) is
    sufficient for kinase activation. This mode of activation contrasts with that of classical MAP kinases, which contain
    a TXY activation loop motif in which phosphorylation of both the threonine and tyrosine residues is required for
    kinase activation
    Similarity: Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily
    Similarity: Contains 1 protein kinase domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: NLK_HUMAN, Q9UBE8
    Function: Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate
    determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1
    and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1.
    The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone
    H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and
    promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin
    signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the
    TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together
    these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of
    the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a
    transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of
    transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and
    MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by
    direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in
    turn required for activation of NLK by MAP3K7/TAK1
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein
    Enzyme regulation: Activated by dimerization and subsequent intermolecular autophosphorylation on Thr-298 (By
    similarity). Activated by the non-canonical Wnt signaling pathway, in which WNT5A treatment leads to activation of
    MAP3K7/TAK1 and HIPK2, which subsequently phosphorylates and activates this protein. Other cytokines such as IL6 may
    also activate this regulatory circuit

    Enzyme Numbers (IUBMB): EC 2.7.11.241 2 EC 2.7.112

    miRNA
    Products:
        
    miRTarBase miRNAs that target NLK:
    hsa-mir-181b (MIRT000238), hsa-mir-181a (MIRT000243), hsa-mir-181c (MIRT000233)

    OriGene 3'-UTR Clone: NLK
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat NLK
    8/139 QIAGEN miScript miRNA Assays for microRNAs that regulate NLK (see all 139):
    hsa-miR-140-5p hsa-miR-199a-3p hsa-miR-605 hsa-miR-3921 hsa-miR-502-3p hsa-miR-208b hsa-miR-508-5p hsa-miR-92b
    SwitchGear 3'UTR luciferase reporter plasmidNLK 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for NLK (see all 4)
    OriGene shRNA RFP: NLK
    OriGene siRNA: NLK
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat NLK

    Gene Editing
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    DNA2.0 Custom Protein Engineering Service for NLK

    Clone
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    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for NLK (see all 3)
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    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: NLK (NM_016231)
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NLK

    Gene Ontology (GO): 5/10 molecular function terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000287magnesium ion binding ISS--
    GO:0004672protein kinase activity TAS10863097
    GO:0004674protein serine/threonine kinase activity ----
    GO:0004707MAP kinase activity ISS--
    GO:0005515protein binding IPI--


    NLK for ontologies           About GeneDecksing


    6 GenomeRNAi human phenotypes for NLK:
     Decreased Hepatitis C virus re  Decreased TP53 protein express  Decreased Wnt reporter activit  Decreased focal adhesion (FA)  
     Decreased melanin production  Increased apoptosis 

    Animal Models:
         7 MGI mutant phenotypes (inferred from 1 allele(MGI details for Nlk):
     behavior/neurological  cellular  growth/size  hematopoietic system  immune system 
     mortality/aging  skeleton 

    NLK for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/8 super-pathways (see all 8About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Wnt Signaling Pathway
    Wnt Signaling Pathway and Pluripotency0.55
    Wnt signaling pathway0.30
    Wnt Signaling Pathway0.33
    Wnt Signaling Pathway NetPath0.22
    2MAPK signaling pathway
    MAPK signaling pathway1.00
    MAPK signaling pathway0.50
    3IL-6 Signaling Pathway
    IL-6 Signaling Pathway1.00
    4Noncanonical Wnt signaling pathway
    Noncanonical Wnt signaling pathway1.00
    5C-MYB transcription factor network
    C-MYB transcription factor network1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 R&D Systems Pathway for NLK
        Wnt Signaling Pathway

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for NLK
        Molecular Mechanisms of Cancer

    5/7 BioSystems Pathways for NLK (see all 7
        MAPK signaling pathway
    Wnt Signaling Pathway and Pluripotency
    Wnt Signaling Pathway NetPath
    IL-6 Signaling Pathway
    Noncanonical Wnt signaling pathway


    3         Kegg Pathways  (Kegg details for NLK):
        MAPK signaling pathway
    Wnt signaling pathway
    Adherens junction


    NLK for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for NLK

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/52 Interacting proteins for NLK (Q9UBE81, 2, 3 ENSP000003846254) via UniProtKB, MINT, STRING, and/or I2D (see all 52)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ATXN1P542532, 3, ENSP000002447694MINT-2873516 I2D: score=3 STRING: ENSP00000244769
    MYBP102423, ENSP000003399924I2D: score=4 STRING: ENSP00000339992
    ASGR1P073063, ENSP000002692994I2D: score=2 STRING: ENSP00000269299
    CUL1Q136163, ENSP000003268044I2D: score=2 STRING: ENSP00000326804
    SKP2Q133093, ENSP000002742554I2D: score=2 STRING: ENSP00000274255
    About this table

    Gene Ontology (GO): 5/11 biological process terms (GO ID links to tree view) (see all 11):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000165MAPK cascade ----
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent ISS--
    GO:0006468protein phosphorylation ISS--
    GO:0007179transforming growth factor beta receptor signaling pathway IMP15004007


    NLK for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    NLK for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for NLK

    1 HMDB Compound for NLK    About this table
    CompoundSynonyms CAS #PubMed Ids
    MagnesiumMagnesium (see all 2)7439-95-4--
    2 Novoseek chemical compound relationships for NLK gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    threonine 54 8 12901858 (1), 14720327 (1), 15870890 (1), 12556497 (1) (see all 5)
    serine 41.3 8 12901858 (1), 14720327 (1), 15870890 (1), 12556497 (1) (see all 5)

    Search CenterWatch for drugs/clinical trials and news about NLK 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for NLK gene: 
    NM_016231.4  

    Unigene Cluster for NLK:

    Nemo-like kinase
    Hs.208759  [show with all ESTs]
    Unigene Representative Sequence: BC064663
    6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000583517 ENST00000407008(uc010crj.3) ENST00000582037 ENST00000496808
    ENST00000584188 ENST00000584878

    miRNA
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    OriGene 3'-UTR Clone: NLK
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat NLK
    8/139 QIAGEN miScript miRNA Assays for microRNAs that regulate NLK (see all 139):
    hsa-miR-140-5p hsa-miR-199a-3p hsa-miR-605 hsa-miR-3921 hsa-miR-502-3p hsa-miR-208b hsa-miR-508-5p hsa-miR-92b
    SwitchGear 3'UTR luciferase reporter plasmidNLK 3' UTR sequence
    Inhib. RNA
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    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat NLK
    Clone
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    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: NLK (NM_016231)
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NLK 
    Primer
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    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for NLK
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    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat NLK
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat NLK
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat NLK

    Additional cDNA sequence: 

    AF180819.1 AF197898.1 AK024686.1 AK130232.1 AK315315.1 AL161970.1 BC064663.1 

    5 DOTS entries:

    DT.452078  DT.95175455  DT.86845958  DT.455470  DT.91902024 

    24/185 AceView cDNA sequences (see all 185):

    AA570309 BM723604 N44198 T15937 AA971118 BF448195 BE827564 AW614469 
    CK300968 BE045690 BE671404 AA252602 AI634825 AI651849 AA953549 AW451797 
    AI433836 W31812 AA425925 AI418499 AL711916 BU191328 BQ636970 BF222185 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    NLK expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTGATGATGA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See NLK Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for NLK

    SOURCE GeneReport for Unigene cluster: Hs.208759
        SABiosciences Expression via Pathway-Focused PCR Array including NLK: 
              WNT Signaling Pathway in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for NLK
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat NLK
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat NLK
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat NLK
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NLK

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for NLK gene from 8/33 species (see all 33)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves NLK1 nemo-like kinase 89.75(n)
    98.67(a)
      417669  XM_415915.3  XP_415915.3 
    lizard
    (Anolis carolinensis)
    Reptilia NLK6
    --
    98(a)
    1 ↔ 1
    GL343729.1(3552-102116)
    African clawed frog
    (Xenopus laevis)
    Amphibia xnlk2 nemo-like kinase 74.19(n)    AB071285.1 
    zebrafish
    (Danio rerio)
    Actinopterygii nlk21 nemo like kinase, type 2 76.74(n)
    94.67(a)
      563460  XM_002664643.1  XP_002664689.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta nmo1 , 3 ommatidial rotation protein serine/threonine
    kinase3
    nemo1
    78(a)3
    64.68(n)1
    77.57(a)1
      388901  NM_168250.21  NP_729318.11 
    worm
    (Caenorhabditis elegans)
    Secernentea lit-11 Protein LIT-1 58.35(n)
    58.82(a)
      176808  NM_001027634.1  NP_001022805.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons ATMPK136
    ATMPK146
    (see all 20)
    mitogen-activated protein kinase 14
    (see all 20)
    42(a)
    41(a)
    (see all 20)
    many ↔ many
    many ↔ many
    (see all 20)
    1(2434030-2435763)
    4(17210245-17211413)
    rice
    (Oryza sativa)
    Liliopsida AF216316.12   -- 75.94(n)    AF216316.1 


    ENSEMBL Gene Tree for NLK (if available)
    TreeFam Gene Tree for NLK (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for NLK gene
    MAPK42  MAPK32  MAPK72  MAPK152  MAPK62  MAPK12  
    18/47 SIMAP similar genes for NLK using alignment to 3 protein entries:     NLK_HUMAN (see all proteins) (see all similar genes):
    TXK    DKFZp686O0215    MAPK14    MAPK11    MAPK1    DYRK4
    MAPK8    MAPK3    MAPK13    NEK9    CDK7    STK11
    CDC2    MAPK7    MAPK9    MAPK10    MOK    RPS6KA2

    NLK for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/2059 NCBI SNPs in NLK are shown (see all 2059    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs2007623551,2
    C--22655936(+) GGGGGA/GAAAAA 1 -- int10--------
    rs341546511,2
    C,F,H--26367840(+) CATTTG/TTCGAC 1 -- us2k16Minor allele frequency- T:0.01NS NA 496
    rs356673371,2
    C,F,--26368235(+) AGATCT/CAAAGG 1 -- us2k13Minor allele frequency- C:0.03NS NA 214
    rs790646411,2
    --26368256(+) CATCAA/TCCTTT 1 -- us2k10--------
    rs346907631,2
    C,F,--26368257(+) ATCAAC/TCTTTT 1 -- us2k15Minor allele frequency- T:0.14NS CSA WA 215
    rs1867578741,2
    --26368320(+) ATTTTC/TAACCC 1 -- us2k10--------
    rs1916219861,2
    --26368360(+) GGCTCA/TTGATT 1 -- us2k10--------
    rs346848051,2
    C,F,--26368445(+) AAAAAA/TAAATA 1 -- us2k13Minor allele frequency- T:0.04NS WA 212
    rs1847470821,2
    --26368446(+) AAAAAA/TAATAA 1 -- us2k10--------
    rs340661241,2
    C,F,--26368492(+) GAAAGA/-AAAAT 1 -- us2k12Minor allele frequency- -:0.04NS 94

    HapMap Linkage Disequilibrium report for NLK (26368763 - 26523407 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for NLK: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing NLK
    DNA2.0 Custom Variant and Variant Library Synthesis for NLK

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    NLK for disorders           About GeneDecksing

    OMIM gene information: 609476    OMIM disorders: --

    12 diseases for NLK:    About MalaCards
    colon cancer    neurofibromatosis    gastric cancer    colorectal cancer
    prostate cancer    ataxia    retinitis    prostatitis
    hepatitis    malaria    neuronitis    carcinoma

    2 Novoseek disease relationships for NLK gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    colon cancer 27.7 6 12901858 (1), 14720327 (1), 20512928 (1)
    cancer 7.8 2 20512928 (1)

    Human Genome Epidemiology (HuGE) Navigator: NLK (7 documents)

    Export disorders for NLK gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for NLK gene, integrated from 9 sources (see all 64):
    (articles sorted by number of sources associating them with NLK)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Characterization of the Fugu rubripes NLK and FN5 genes flanking the NF1 (Neurofibromatosis type 1) gene in the 5' direction and mapping of the human counterparts. (PubMed id 10863097)1, 2, 3, 9 Kehrer-Sawatzki H....Krone W. (2000)
    2. STAT3 regulates Nemo-like kinase by mediating its interaction with IL-6-stimulated TGFbeta-activated kinase 1 for STAT3 Ser-727 phosphorylation. (PubMed id 15764709)1, 2, 9 Kojima H....Nakajima K. (2005)
    3. Wnt-1 signal induces phosphorylation and degradation of c-Myb protein via TAK1, HIPK2, and NLK. (PubMed id 15082531)1, 2, 9 Kanei-Ishii C.... Ishii S. (2004)
    4. Regulation of FOXO1 by TAK1-Nemo-like kinase pathway. (PubMed id 20061393)1, 2, 9 Kim S....Chung J. (2010)
    5. A histone lysine methyltransferase activated by non-canonical Wnt signalling suppresses PPAR-gamma transactivation. (PubMed id 17952062)1, 2, 9 Takada I....Kato S. (2007)
    6. Zipper-interacting protein kinase (ZIPK) modulates canonical Wnt/beta-catenin signaling through interaction with Nemo-like kinase and T-cell factor 4 (NLK/TCF4). (PubMed id 21454679)1, 2 Togi S.... Matsuda T. (2011)
    7. Oxidative stress-dependent regulation of Forkhead box O4 activity by nemo-like kinase. (PubMed id 20874444)1, 2 Szypowska A.A....Burgering B.M.T. (2011)
    8. Nemo-like kinase suppresses Notch signalling by inter fering with formation of the Notch active transcriptional complex. (PubMed id 20118921)1, 2 Ishitani T....Itoh M. (2010)
    9. NARF, an nemo-like kinase (NLK)-associated ring finger protein regulates the ubiquitylation and degradation of T cell factor/lymphoid enhancer factor (TCF/LEF). (PubMed id 16714285)1, 2 Yamada M.... Shibuya H. (2006)
    10. Role of the TAK1-NLK-STAT3 pathway in TGF-beta-mediated mesoderm induction. (PubMed id 15004007)1, 2 Ohkawara B.... Shibuya H. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 51701 HGNC: 29858 AceView: NLK Ensembl:ENSG00000087095 euGenes: HUgn51701
    ECgene: NLK Kegg: 51701 H-InvDB: NLK

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for NLK Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for NLK gene:
    Search GeneIP for patents involving NLK

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
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    About This Section

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