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Aliases for NLGN4Y-AS1 Gene

Subcategory (RNA class) for NLGN4Y-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for NLGN4Y-AS1 Gene

  • NLGN4Y Antisense RNA 1 2 3 5
  • NLGN4Y Antisense RNA 1 (Non-Protein Coding) 2 3
  • NLGN4Y Antisense RNA (Non-Protein Coding) 2 3
  • NLGN4Y-AS 3
  • NLGN4YAS 3

External Ids for NLGN4Y-AS1 Gene

Previous HGNC Symbols for NLGN4Y-AS1 Gene


Previous GeneCards Identifiers for NLGN4Y-AS1 Gene

  • GC00U931498
  • GC0YM016906

Summaries for NLGN4Y-AS1 Gene

GeneCards Summary for NLGN4Y-AS1 Gene

NLGN4Y-AS1 (NLGN4Y Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NLGN4Y-AS1 Gene

Genomics for NLGN4Y-AS1 Gene

Regulatory Elements for NLGN4Y-AS1 Gene

Enhancers for NLGN4Y-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0YF014644 0.6 ENCODE 0.1 +159.7 159678 0.2 GC0YP014640 NLGN4Y-AS1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around NLGN4Y-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NLGN4Y-AS1 Gene

14,793,642 bp from pter
14,804,033 bp from pter
10,392 bases
Minus strand

Genomic View for NLGN4Y-AS1 Gene

Genes around NLGN4Y-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NLGN4Y-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NLGN4Y-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NLGN4Y-AS1 Gene

Proteins for NLGN4Y-AS1 Gene

Post-translational modifications for NLGN4Y-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NLGN4Y-AS1 Gene

Domains & Families for NLGN4Y-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NLGN4Y-AS1 Gene

Function for NLGN4Y-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NLGN4Y-AS1 Gene

Localization for NLGN4Y-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NLGN4Y-AS1 Gene

Pathways & Interactions for NLGN4Y-AS1 Gene

SuperPathways for NLGN4Y-AS1 Gene

No Data Available

Interacting Proteins for NLGN4Y-AS1 Gene

Gene Ontology (GO) - Biological Process for NLGN4Y-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NLGN4Y-AS1 Gene

Transcripts for NLGN4Y-AS1 Gene

mRNA/cDNA for NLGN4Y-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NLGN4Y-AS1 Gene

No ASD Table

Relevant External Links for NLGN4Y-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NLGN4Y-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NLGN4Y-AS1 Gene

SOURCE GeneReport for Unigene cluster for NLGN4Y-AS1 Gene:

genes like me logo Genes that share expression patterns with NLGN4Y-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NLGN4Y-AS1 Gene

Orthologs for NLGN4Y-AS1 Gene

Evolution for NLGN4Y-AS1 Gene

Gene Tree for NLGN4Y-AS1 (if available)
Gene Tree for NLGN4Y-AS1 (if available)

No data available for Orthologs for NLGN4Y-AS1 Gene

Paralogs for NLGN4Y-AS1 Gene

No data available for Paralogs for NLGN4Y-AS1 Gene

Variants for NLGN4Y-AS1 Gene

Sequence variations from dbSNP and Humsavar for NLGN4Y-AS1 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs111221348 -- 14,803,045(+) ATATA(C/T)AAAAT intron-variant
rs111619157 -- 14,794,660(+) TGAAG(C/T)TTCTC intron-variant
rs111893753 -- 14,802,677(+) TTTTA(A/T)ATATA intron-variant
rs112960099 -- 14,802,297(+) TTCTC(A/T)CTCTC intron-variant
rs113609291 -- 14,801,562(+) AAAAA(A/G)AGAGA intron-variant

Relevant External Links for NLGN4Y-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NLGN4Y-AS1 Gene

Disorders for NLGN4Y-AS1 Gene

Relevant External Links for NLGN4Y-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for NLGN4Y-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NLGN4Y-AS1 Gene

Publications for NLGN4Y-AS1 Gene

  1. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3 64

Products for NLGN4Y-AS1 Gene

Sources for NLGN4Y-AS1 Gene

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