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NKX2-1-AS1 Gene(RNA Gene)

NKX2-1 Antisense RNA 1

GCID:
GC14P036519
GIFtS:
14
Genes Participants
UDN Logo

Aliases for NKX2-1-AS1 Gene

Subcategory (RNA class) for NKX2-1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NKX2-1-AS1 Gene

  • NKX2-1 Antisense RNA 1 2 3 5
  • NKX2-1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NKX2-1-AS1 Gene

Previous GeneCards Identifiers for NKX2-1-AS1 Gene

  • GC14P036989

Summaries for NKX2-1-AS1 Gene

GeneCards Summary for NKX2-1-AS1 Gene

NKX2-1-AS1 (NKX2-1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NKX2-1-AS1 Gene

Genomics for NKX2-1-AS1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for NKX2-1-AS1 Gene

Enhancers for NKX2-1-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around NKX2-1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NKX2-1-AS1 Gene

Chromosome:
14
Start:
36,519,278 bp from pter
End:
36,523,016 bp from pter
Size:
3,739 bases
Orientation:
Plus strand

Genomic View for NKX2-1-AS1 Gene

Genes around NKX2-1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NKX2-1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NKX2-1-AS1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for NKX2-1-AS1 Gene

Proteins for NKX2-1-AS1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for NKX2-1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NKX2-1-AS1 Gene

Domains & Families for NKX2-1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NKX2-1-AS1 Gene

Function for NKX2-1-AS1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NKX2-1-AS1 Gene

Localization for NKX2-1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NKX2-1-AS1 Gene

Pathways & Interactions for NKX2-1-AS1 Gene

SuperPathways for NKX2-1-AS1 Gene

PathCards logoMore details on SuperPathways for NKX2-1-AS1
No Data Available

Interacting Proteins for NKX2-1-AS1 Gene

Gene Ontology (GO) - Biological Process for NKX2-1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NKX2-1-AS1 Gene

Drugs & Compounds for NKX2-1-AS1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for NKX2-1-AS1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for NKX2-1-AS1 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NKX2-1-AS1 Gene

NKX2-1 antisense RNA 1:
Representative Sequences:

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NKX2-1-AS1 Gene

No ASD Table

Relevant External Links for NKX2-1-AS1 Gene

GeneLoc Exon Structure for
NKX2-1-AS1
ECgene alternative splicing isoforms for
NKX2-1-AS1

Expression for NKX2-1-AS1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for NKX2-1-AS1 Gene

mRNA expression in normal human tissues for NKX2-1-AS1 Gene
mRNA expression by GTEx for NKX2-1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NKX2-1-AS1 Gene

This gene is overexpressed in Thyroid (x33.0) and Lung (x11.2).

SOURCE GeneReport for Unigene cluster for NKX2-1-AS1 Gene Hs.497090

genes like me logo Genes that share expression patterns with NKX2-1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for NKX2-1-AS1 Gene

Orthologs for NKX2-1-AS1 Gene

Evolution for NKX2-1-AS1 Gene

ENSEMBL:
Gene Tree for NKX2-1-AS1 (if available)
TreeFam:
Gene Tree for NKX2-1-AS1 (if available)

No data available for Orthologs for NKX2-1-AS1 Gene

Paralogs for NKX2-1-AS1 Gene

No data available for Paralogs for NKX2-1-AS1 Gene

Variants for NKX2-1-AS1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for NKX2-1-AS1 Gene

Disorders for NKX2-1-AS1 Gene

Relevant External Links for NKX2-1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NKX2-1-AS1

No disorders were found for NKX2-1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NKX2-1-AS1 Gene

Publications for NKX2-1-AS1 Gene

  1. Comprehensive characterization of cancer subtype associated long non-coding RNAs and their clinical implications. (PMID: 25307233) Zhao W. … Jiao S. (Sci Rep 2014) 3 67
  2. Genome wide association study of age at menarche in the Japanese population. (PMID: 23667675) Tanikawa C. … Matsuda K. (PLoS ONE 2013) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for NKX2-1-AS1 Gene

Sources for NKX2-1-AS1 Gene

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