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Aliases for NKAPP1 Gene

Aliases for NKAPP1 Gene

  • NFKB Activating Protein Pseudogene 1 2 3
  • CXorf42 3 4
  • NF-Kappa-B-Activating Protein Pseudogene 1 4
  • Chromosome X Open Reading Frame 42 2

External Ids for NKAPP1 Gene

Previous HGNC Symbols for NKAPP1 Gene

  • CXorf42

Previous GeneCards Identifiers for NKAPP1 Gene

  • GC0XM119371
  • GC0XM108822
  • GC0XM119255
  • GC0XM119258

Summaries for NKAPP1 Gene

GeneCards Summary for NKAPP1 Gene

NKAPP1 (NFKB Activating Protein Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NKAPP1 Gene

Genomics for NKAPP1 Gene

Genomic Location for NKAPP1 Gene

120,120,953 bp from pter
120,245,267 bp from pter
124,315 bases
Minus strand

Genomic View for NKAPP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NKAPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NKAPP1 Gene

No data available for Regulatory Elements for NKAPP1 Gene

Proteins for NKAPP1 Gene

  • Protein details for NKAPP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative uncharacterized protein CXorf42
    Protein Accession:
    Secondary Accessions:
    • Q05CP2
    • Q14CJ5
    • Q7Z3P3

    Protein attributes for NKAPP1 Gene

    125 amino acids
    Molecular mass:
    14163 Da
    Quaternary structure:
    No Data Available
    • Sequence=CAD97792.1; Type=Miscellaneous discrepancy; Note=Cloning artifact.; Evidence={ECO:0000305};

neXtProt entry for NKAPP1 Gene

Proteomics data for NKAPP1 Gene at MOPED

Post-translational modifications for NKAPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NKAPP1 Gene

Domains for NKAPP1 Gene

Protein Domains for NKAPP1 Gene


Suggested Antigen Peptide Sequences for NKAPP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NKAPP1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for NKAPP1 Gene

Function for NKAPP1 Gene

Phenotypes for NKAPP1 Gene

GenomeRNAi human phenotypes for NKAPP1:
genes like me logo Genes that share phenotypes with NKAPP1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NKAPP1 Gene

Localization for NKAPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NKAPP1 Gene

Pathways for NKAPP1 Gene

SuperPathways for NKAPP1 Gene

No Data Available

Interacting Proteins for NKAPP1 Gene

Gene Ontology (GO) - Biological Process for NKAPP1 Gene


No data available for Pathways by source for NKAPP1 Gene

Transcripts for NKAPP1 Gene

Unigene Clusters for NKAPP1 Gene

NFKB activating protein pseudogene 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NKAPP1

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NKAPP1 Gene

No ASD Table

Relevant External Links for NKAPP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NKAPP1 Gene

mRNA expression in normal human tissues for NKAPP1 Gene

SOURCE GeneReport for Unigene cluster for NKAPP1 Gene Hs.442518

genes like me logo Genes that share expressions with NKAPP1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for NKAPP1 Gene

Orthologs for NKAPP1 Gene

Evolution for NKAPP1 Gene

Gene Tree for NKAPP1 (if available)
Gene Tree for NKAPP1 (if available)

No data available for Orthologs for NKAPP1 Gene

Paralogs for NKAPP1 Gene

No data available for Paralogs for NKAPP1 Gene

Variants for NKAPP1 Gene

Sequence variations from dbSNP and Humsavar for NKAPP1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs993973 -- 120,238,681(+) TTTTC(C/T)GAACA intron-variant
rs993974 -- 120,238,792(+) TAGGT(A/G)AAGAG intron-variant
rs2285405 -- 120,244,594(+) GGAGA(A/G)GGGCG intron-variant
rs2361192 -- 120,239,947(+) TCAGA(C/T)TGCTT intron-variant
rs5910807 -- 120,239,143(+) TGCGC(A/G)TGCCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NKAPP1 Gene

Variant ID Type Subtype PubMed ID
esv2740431 CNV Deletion 23290073
esv2676041 CNV Deletion 23128226
esv2740432 CNV Deletion 23290073

Relevant External Links for NKAPP1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NKAPP1 Gene

Disorders for NKAPP1 Gene

No disorders were found for NKAPP1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for NKAPP1 Gene

Publications for NKAPP1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 4
  5. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4

Products for NKAPP1 Gene

Sources for NKAPP1 Gene

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