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Aliases for NIFK-AS1 Gene

Subcategory (RNA class) for NIFK-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for NIFK-AS1 Gene

  • NIFK Antisense RNA 1 2 3 5

External Ids for NIFK-AS1 Gene

Previous GeneCards Identifiers for NIFK-AS1 Gene

  • GC02P122408

Summaries for NIFK-AS1 Gene

GeneCards Summary for NIFK-AS1 Gene

NIFK-AS1 (NIFK Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NIFK-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NIFK-AS1 Gene

Genomics for NIFK-AS1 Gene

GeneHancer (GH) Regulatory Elements for NIFK-AS1 Gene

Promoters and enhancers for NIFK-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I121647 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 550.8 +0.3 347 5.1 HDGF PKNOX1 FOXA2 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 CLASP1 NIFK-AS1 LINC01823 GC02M121659
GH02I121698 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.2 +50.5 50469 2.9 PKNOX1 ATF1 ZNF335 GLIS2 SCRT2 ZNF143 ETV6 FOS ATF7 RUNX3 CLASP1 NPM1P32 ENSG00000279721 NIFK-AS1
GH02I121689 Enhancer 0.7 Ensembl 0.3 +40.0 39950 0.4 CTCF MXI1 FOXA2 ZNF792 SAP130 ARID4B BMI1 RAD21 GATA3 ZNF766 ENSG00000279721 NPM1P32 NIFK-AS1
GH02I121706 Enhancer 1 Ensembl ENCODE 0.2 +58.3 58334 2.5 ELF3 FOXA2 INSM2 ARID4B FEZF1 RARA SLC30A9 ZNF213 ZNF366 ZSCAN5C NPM1P32 NIFK TSN ENSG00000279721 NIFK-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NIFK-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NIFK-AS1 Gene

Genomic Locations for NIFK-AS1 Gene
78,911 bases
Plus strand

Genomic View for NIFK-AS1 Gene

Genes around NIFK-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NIFK-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NIFK-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NIFK-AS1 Gene

Proteins for NIFK-AS1 Gene

Post-translational modifications for NIFK-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NIFK-AS1 Gene

Domains & Families for NIFK-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NIFK-AS1 Gene

Function for NIFK-AS1 Gene

Phenotypes From GWAS Catalog for NIFK-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NIFK-AS1 Gene

Localization for NIFK-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NIFK-AS1 Gene

Pathways & Interactions for NIFK-AS1 Gene

SuperPathways for NIFK-AS1 Gene

No Data Available

Interacting Proteins for NIFK-AS1 Gene

Gene Ontology (GO) - Biological Process for NIFK-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NIFK-AS1 Gene

Drugs & Compounds for NIFK-AS1 Gene

No Compound Related Data Available

Transcripts for NIFK-AS1 Gene

mRNA/cDNA for NIFK-AS1 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NIFK-AS1 Gene

No ASD Table

Relevant External Links for NIFK-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NIFK-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NIFK-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NIFK-AS1 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x4.7).
genes like me logo Genes that share expression patterns with NIFK-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NIFK-AS1 Gene

Orthologs for NIFK-AS1 Gene

Evolution for NIFK-AS1 Gene

Gene Tree for NIFK-AS1 (if available)
Gene Tree for NIFK-AS1 (if available)

No data available for Orthologs for NIFK-AS1 Gene

Paralogs for NIFK-AS1 Gene

No data available for Paralogs for NIFK-AS1 Gene

Variants for NIFK-AS1 Gene

Sequence variations from dbSNP and Humsavar for NIFK-AS1 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000023513 -- 121,685,236(+) C/G/T genic_downstream_transcript_variant, intron_variant
rs1000077330 -- 121,685,427(+) T/A genic_downstream_transcript_variant, intron_variant
rs1000085953 -- 121,715,354(+) T/G genic_downstream_transcript_variant, intron_variant
rs1000092685 -- 121,679,120(+) T/A genic_downstream_transcript_variant, intron_variant
rs1000132805 -- 121,709,785(+) C/T genic_downstream_transcript_variant, intron_variant

Structural Variations from Database of Genomic Variants (DGV) for NIFK-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2671161 CNV deletion 23128226
esv2759088 CNV gain 17122850
esv3560044 CNV deletion 23714750
esv3592209 CNV gain 21293372
esv3592214 CNV gain 21293372
esv3592216 CNV loss 21293372
esv3592217 CNV gain 21293372
nsv1011665 CNV gain 25217958
nsv459163 CNV gain 19166990
nsv582808 CNV gain 21841781
nsv834351 CNV loss 17160897
nsv963715 CNV duplication 23825009
nsv979113 CNV duplication 23825009

Additional Variant Information for NIFK-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NIFK-AS1 Gene

Disorders for NIFK-AS1 Gene

Additional Disease Information for NIFK-AS1

No disorders were found for NIFK-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NIFK-AS1 Gene

Publications for NIFK-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for NIFK-AS1 Gene

Sources for NIFK-AS1 Gene

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