Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NIFK Gene

Aliases for NIFK Gene

  • Nucleolar Protein Interacting With The FHA Domain Of MKI67 2 3
  • MKI67IP 3 4 6
  • Nopp34 3 4 6
  • Nucleolar Protein Interacting With The FHA Domain Of PKi-67 2 3
  • MKI67 (FHA Domain) Interacting Nucleolar Phosphoprotein 2 3
  • Nucleolar Phosphoprotein Nopp34 3 4
  • HNIFK 3 4
  • Nucleolar Protein Interacting With The FHA Domain Of PKI-67 4
  • MKI67 FHA Domain-Interacting Nucleolar Phosphoprotein 3

External Ids for NIFK Gene

Previous HGNC Symbols for NIFK Gene

  • MKI67IP

Previous GeneCards Identifiers for NIFK Gene

  • GC02M122485

Summaries for NIFK Gene

Entrez Gene Summary for NIFK Gene

  • This gene encodes a protein that interacts with the forkhead-associated domain of the Ki-67 antigen. The encoded protein may bind RNA and may play a role in mitosis and cell cycle progression. Multiple pseudogenes exist on chromosomes 5, 10, 12, 15, and 19.[provided by RefSeq, Jan 2009]

GeneCards Summary for NIFK Gene

NIFK (Nucleolar Protein Interacting With The FHA Domain Of MKI67) is a Protein Coding gene.

Gene Wiki entry for NIFK Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NIFK Gene

Genomics for NIFK Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for NIFK Gene

Start:
121,726,945 bp from pter
End:
121,736,927 bp from pter
Size:
9,983 bases
Orientation:
Minus strand

Genomic View for NIFK Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NIFK Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NIFK Gene

No data available for Regulatory Elements for NIFK Gene

Proteins for NIFK Gene

  • Protein details for NIFK Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BYG3-MK67I_HUMAN
    Recommended name:
    MKI67 FHA domain-interacting nucleolar phosphoprotein
    Protein Accession:
    Q9BYG3
    Secondary Accessions:
    • A8K788
    • Q8TB66
    • Q96ED4

    Protein attributes for NIFK Gene

    Size:
    293 amino acids
    Molecular mass:
    34222 Da
    Quaternary structure:
    • Binds to the FHA domain of MKI67; this interaction is enhanced in mitosis.

    Three dimensional structures from OCA and Proteopedia for NIFK Gene

neXtProt entry for NIFK Gene

Proteomics data for NIFK Gene at MOPED

Post-translational modifications for NIFK Gene

  • Sequentially phosphorylated on Thr-238, Thr-234 and Ser-230. Thr-234 is phosphorylated only when Thr-238 is phosphorylated. Likewise, phosphorylation at Ser-230 requires that Thr-234 and Thr-238 are phosphorylated. Phosphorylation enhances MKI67 binding.
  • Ubiquitination at Lys139
  • Modification sites at PhosphoSitePlus

Other Protein References for NIFK Gene

No data available for DME Specific Peptides for NIFK Gene

Domains for NIFK Gene

Gene Families for NIFK Gene

HGNC:
  • RBM :RNA binding motif (RRM) containing

Graphical View of Domain Structure for InterPro Entry

Q9BYG3

UniProtKB/Swiss-Prot:

MK67I_HUMAN :
  • Q9BYG3
Domain:
  • Contains 1 RRM (RNA recognition motif) domain.
genes like me logo Genes that share domains with NIFK: view

No data available for Suggested Antigen Peptide Sequences for NIFK Gene

Function for NIFK Gene

Gene Ontology (GO) - Molecular Function for NIFK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0003676 nucleic acid binding --
GO:0003723 RNA binding IDA 11342549
GO:0005515 protein binding IPI 11342549
GO:0044822 poly(A) RNA binding IDA 22658674
genes like me logo Genes that share ontologies with NIFK: view

Phenotypes for NIFK Gene

GenomeRNAi human phenotypes for NIFK:
genes like me logo Genes that share phenotypes with NIFK: view

miRNA for NIFK Gene

miRTarBase miRNAs that target NIFK

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NIFK

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for NIFK Gene

Localization for NIFK Gene

Subcellular locations from UniProtKB/Swiss-Prot for NIFK Gene

Nucleus, nucleolus. Chromosome. Note=Localizes to mitotic chromosomes in conjunction with MKI67.

Gene Ontology (GO) - Cellular Components for NIFK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000794 condensed nuclear chromosome IDA 11342549
GO:0005634 nucleus IDA --
GO:0005654 nucleoplasm IDA 11342549
GO:0005730 nucleolus IDA --
GO:0005737 cytoplasm IDA 11342549
genes like me logo Genes that share ontologies with NIFK: view

No data available for Subcellular locations from COMPARTMENTS for NIFK Gene

Pathways for NIFK Gene

SuperPathways for NIFK Gene

No Data Available

Gene Ontology (GO) - Biological Process for NIFK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006461 protein complex assembly NAS 11342549
GO:0009303 rRNA transcription NAS 11342549
GO:0010923 negative regulation of phosphatase activity IDA 19389623
GO:0016072 rRNA metabolic process NAS 11342549
genes like me logo Genes that share ontologies with NIFK: view

No data available for Pathways by source for NIFK Gene

Transcripts for NIFK Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NIFK

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NIFK Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b · 7c
SP1: -
SP2:
SP3: -

Relevant External Links for NIFK Gene

GeneLoc Exon Structure for
NIFK
ECgene alternative splicing isoforms for
NIFK

Expression for NIFK Gene

mRNA expression in normal human tissues for NIFK Gene

Protein differential expression in normal tissues for NIFK Gene

This gene is overexpressed in Peripheral blood mononuclear cells (23.3) and CD8 Tcells (6.1).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for NIFK Gene

genes like me logo Genes that share expressions with NIFK: view

Expression partners for NIFK Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for NIFK Gene

Orthologs for NIFK Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for NIFK Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia NIFK 35
  • 82.82 (n)
  • 74.4 (a)
MKI67IP 36
  • 73 (a)
OneToOne
dog
(Canis familiaris)
Mammalia MKI67IP 35
  • 82.37 (n)
  • 74.74 (a)
NIFK 36
  • 69 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Nifk 35
  • 70.02 (n)
  • 62.85 (a)
Mki67ip 16
Mki67ip 36
  • 56 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia MKI67IP 35
  • 99.43 (n)
  • 98.98 (a)
MKI67IP 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Nifk 35
  • 72.45 (n)
  • 64.15 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 61 (a)
OneToMany
-- 36
  • 54 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia NIFK 36
  • 48 (a)
OneToOne
chicken
(Gallus gallus)
Aves MKI67IP 35
  • 60.19 (n)
  • 56.75 (a)
NIFK 36
  • 51 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia NIFK 36
  • 53 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia nifk 35
  • 57.98 (n)
  • 57.14 (a)
Str.1406 35
African clawed frog
(Xenopus laevis)
Amphibia LOC398645 35
zebrafish
(Danio rerio)
Actinopterygii mki67ipl 35
nifk 35
  • 60.66 (n)
  • 54.1 (a)
nifk 36
  • 48 (a)
OneToOne
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.11192 35
fruit fly
(Drosophila melanogaster)
Insecta CG6937 36
  • 22 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea T04A8.6 36
  • 25 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes NOP15 36
  • 23 (a)
OneToOne
NOP15 38
thale cress
(Arabidopsis thaliana)
eudicotyledons AT5G04600 35
  • 48.15 (n)
  • 38.89 (a)
rice
(Oryza sativa)
Liliopsida Os08g0412200 35
  • 51.37 (n)
  • 41.1 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.10558 36
  • 29 (a)
OneToOne
Species with no ortholog for NIFK:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for NIFK Gene

ENSEMBL:
Gene Tree for NIFK (if available)
TreeFam:
Gene Tree for NIFK (if available)

Paralogs for NIFK Gene

genes like me logo Genes that share paralogs with NIFK: view

No data available for Paralogs for NIFK Gene

Variants for NIFK Gene

Sequence variations from dbSNP and Humsavar for NIFK Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs287800 -- 121,732,576(+) TGTCA(A/G)TAACA intron-variant
rs287801 -- 121,730,400(+) gtggc(A/G)catgc intron-variant
rs287802 -- 121,730,413(+) gtaat(C/G)ccagc intron-variant
rs2305020 -- 121,731,244(+) CAATG(C/T)GAAGT intron-variant
rs3860375 -- 121,734,110(+) cagtg(A/T)ttagt intron-variant

Relevant External Links for NIFK Gene

HapMap Linkage Disequilibrium report
NIFK

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for NIFK Gene

Disorders for NIFK Gene

No disorders were found for NIFK Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for NIFK Gene

Publications for NIFK Gene

  1. A novel nucleolar protein, NIFK, interacts with the forkhead associated domain of Ki-67 antigen in mitosis. (PMID: 11342549) Takagi M. … Yoneda Y. (J. Biol. Chem. 2001) 2 3 4 23
  2. Structure of human Ki67 FHA domain and its binding to a phosphoprotein fragment from hNIFK reveal unique recognition sites and new views to the structural basis of FHA domain functions. (PMID: 14659764) Li H. … Tsai M.-D. (J. Mol. Biol. 2004) 2 3 4
  3. Sequential phosphorylation and multisite interactions characterize specific target recognition by the FHA domain of Ki67. (PMID: 16244663) Byeon I.-J. … Tsai M.-D. (Nat. Struct. Mol. Biol. 2005) 2 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 3 4

Products for NIFK Gene

Sources for NIFK Gene

Back to Top

Content