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Aliases for NHS-AS1 Gene

Subcategory (RNA class) for NHS-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NHS-AS1 Gene

  • NHS Antisense RNA 1 2 3 5
  • NHS Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NHS-AS1 Gene

Previous GeneCards Identifiers for NHS-AS1 Gene

  • GC00U933688

Summaries for NHS-AS1 Gene

GeneCards Summary for NHS-AS1 Gene

NHS-AS1 (NHS Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NHS-AS1 Gene

Genomics for NHS-AS1 Gene

Regulatory Elements for NHS-AS1 Gene

Enhancers for NHS-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF017580 0.6 Ensembl ENCODE 12.9 -21.9 -21868 1.7 EBF1 NHS-AS1 GC0XM017645
GH0XF017559 1 Ensembl ENCODE 0.8 -1.2 -1163 2.2 JUN CEBPB EP300 BRCA1 RAD21 JUND MAFF ZBTB48 SMARCA4 SCRT2 NHS-AS1 GC0XM017645
GH0XF017546 1 Ensembl ENCODE 0.4 +10.7 10720 2.9 MAX ZIC2 ZNF316 FOS NFE2 MAFK NFE2L2 ZFP37 MAFG EP300 NHS NHS-AS1 LOC101928389
GH0XF017526 1 Ensembl ENCODE 0.3 +30.9 30926 4.0 ZNF263 ZFP37 MAFG NR3C1 ZIC2 ZNF316 JUND MAFF ZNF366 GLIS1 NHS LOC101928389 NHS-AS1
GH0XF017590 1 Ensembl ENCODE 0.3 -32.8 -32753 2.2 CTCF ZNF654 NFYA CEBPB MAFG RAD21 RFX5 ZNF316 MAFF ZFP3 NHS NHS-AS1 GC0XM017645
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NHS-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NHS-AS1 Gene

Chromosome:
X
Start:
17,552,349 bp from pter
End:
17,559,127 bp from pter
Size:
6,779 bases
Orientation:
Minus strand

Genomic View for NHS-AS1 Gene

Genes around NHS-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NHS-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NHS-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NHS-AS1 Gene

Proteins for NHS-AS1 Gene

Post-translational modifications for NHS-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NHS-AS1 Gene

Domains & Families for NHS-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NHS-AS1 Gene

Function for NHS-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NHS-AS1 Gene

Localization for NHS-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NHS-AS1 Gene

Pathways & Interactions for NHS-AS1 Gene

SuperPathways for NHS-AS1 Gene

No Data Available

Interacting Proteins for NHS-AS1 Gene

Gene Ontology (GO) - Biological Process for NHS-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NHS-AS1 Gene

Transcripts for NHS-AS1 Gene

mRNA/cDNA for NHS-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NHS-AS1 Gene

No ASD Table

Relevant External Links for NHS-AS1 Gene

GeneLoc Exon Structure for
NHS-AS1
ECgene alternative splicing isoforms for
NHS-AS1

Expression for NHS-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NHS-AS1 Gene

genes like me logo Genes that share expression patterns with NHS-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NHS-AS1 Gene

Orthologs for NHS-AS1 Gene

Evolution for NHS-AS1 Gene

ENSEMBL:
Gene Tree for NHS-AS1 (if available)
TreeFam:
Gene Tree for NHS-AS1 (if available)

No data available for Orthologs for NHS-AS1 Gene

Paralogs for NHS-AS1 Gene

No data available for Paralogs for NHS-AS1 Gene

Variants for NHS-AS1 Gene

Sequence variations from dbSNP and Humsavar for NHS-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs111266640 -- 17,560,584(+) AGATC(A/G)GGATG intron-variant, upstream-variant-2KB
rs113820898 -- 17,557,711(+) CAACT(-/G)GGGGT intron-variant
rs113947232 -- 17,557,741(+) CTCAT(A/G)TAGCT intron-variant
rs11796970 -- 17,555,503(+) TCCTA(A/G)ATGGG intron-variant
rs11797700 -- 17,552,071(+) ccagg(A/C)ccaat intron-variant, downstream-variant-500B

Relevant External Links for NHS-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NHS-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NHS-AS1 Gene

Disorders for NHS-AS1 Gene

Relevant External Links for NHS-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NHS-AS1

No disorders were found for NHS-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NHS-AS1 Gene

Publications for NHS-AS1 Gene

No publications were found for NHS-AS1 Gene.

Products for NHS-AS1 Gene

Sources for NHS-AS1 Gene

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