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Aliases for NFYC-AS1 Gene

Subcategory (RNA class) for NFYC-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for NFYC-AS1 Gene

  • NFYC Antisense RNA 1 2 3
  • 0808y08y 3

External Ids for NFYC-AS1 Gene

ORGUL Members for NFYC-AS1 Gene

Previous GeneCards Identifiers for NFYC-AS1 Gene

  • GC01M041155

Summaries for NFYC-AS1 Gene

GeneCards Summary for NFYC-AS1 Gene

NFYC-AS1 (NFYC Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NFYC-AS1 Gene

Genomics for NFYC-AS1 Gene

Genomic Location for NFYC-AS1 Gene

Start:
40,689,080 bp from pter
End:
40,692,261 bp from pter
Size:
3,182 bases
Orientation:
Minus strand

Genomic View for NFYC-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NFYC-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NFYC-AS1 Gene

No data available for Regulatory Elements for NFYC-AS1 Gene

Proteins for NFYC-AS1 Gene

Post-translational modifications for NFYC-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NFYC-AS1 Gene

Domains for NFYC-AS1 Gene

Gene Families for NFYC-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NFYC-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NFYC-AS1 Gene

Function for NFYC-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NFYC-AS1 Gene

Localization for NFYC-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NFYC-AS1 Gene

Pathways for NFYC-AS1 Gene

SuperPathways for NFYC-AS1 Gene

No Data Available

Interacting Proteins for NFYC-AS1 Gene

Gene Ontology (GO) - Biological Process for NFYC-AS1 Gene

None

No data available for Pathways by source for NFYC-AS1 Gene

Transcripts for NFYC-AS1 Gene

mRNA/cDNA for NFYC-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NFYC-AS1

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NFYC-AS1 Gene

No ASD Table

Relevant External Links for NFYC-AS1 Gene

GeneLoc Exon Structure for
NFYC-AS1
ECgene alternative splicing isoforms for
NFYC-AS1

Expression for NFYC-AS1 Gene

mRNA expression in normal human tissues for NFYC-AS1 Gene

genes like me logo Genes that share expressions with NFYC-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for NFYC-AS1 Gene

Orthologs for NFYC-AS1 Gene

Evolution for NFYC-AS1 Gene

ENSEMBL:
Gene Tree for NFYC-AS1 (if available)
TreeFam:
Gene Tree for NFYC-AS1 (if available)

No data available for Orthologs for NFYC-AS1 Gene

Paralogs for NFYC-AS1 Gene

No data available for Paralogs for NFYC-AS1 Gene

Variants for NFYC-AS1 Gene

Sequence variations from dbSNP and Humsavar for NFYC-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs552147 -- 40,689,141(-) AGAGC(C/G)ACAGC nc-transcript-variant
rs965949 -- 40,688,735(-) CCACA(C/T)TGAGC downstream-variant-500B
rs10789187 -- 40,689,501(+) GGTCT(C/T)GAACT nc-transcript-variant
rs74068554 -- 40,688,607(+) CTATC(A/G)CCAAG downstream-variant-500B
rs116122559 -- 40,689,186(+) GAGCT(C/T)TATTT nc-transcript-variant

Relevant External Links for NFYC-AS1 Gene

HapMap Linkage Disequilibrium report
NFYC-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for NFYC-AS1 Gene

Disorders for NFYC-AS1 Gene

No disorders were found for NFYC-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for NFYC-AS1 Gene

Publications for NFYC-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3

Products for NFYC-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate NFYC-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for NFYC-AS1
    • Block miRNA regulation of NFYC-AS1 using miScript Target Protectors

    Sources for NFYC-AS1 Gene

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