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Aliases for NEXN-AS1 Gene

Subcategory (RNA class) for NEXN-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for NEXN-AS1 Gene

  • NEXN Antisense RNA 1 2 3 4
  • NEXN Antisense RNA 1 (Non-Protein Coding) 2 3
  • C1orf118 3 4
  • Chromosome 1 Open Reading Frame 118 2

External Ids for NEXN-AS1 Gene

ORGUL Members for NEXN-AS1 Gene

Previous Symbols for NEXN-AS1 Gene

  • C1orf118

Summaries for NEXN-AS1 Gene

GeneCards Summary for NEXN-AS1 Gene

NEXN-AS1 (NEXN Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NEXN-AS1 Gene

Genomics for NEXN-AS1 Gene

Genomic Location for NEXN-AS1 Gene

Start:
77,881,348 bp from pter
End:
77,889,539 bp from pter
Size:
8,192 bases
Orientation:
Minus strand

Genomic View for NEXN-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NEXN-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NEXN-AS1 Gene

No data available for Regulatory Elements for NEXN-AS1 Gene

Proteins for NEXN-AS1 Gene

  • Protein details for NEXN-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NBZ9-NEAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein NEXN-AS1
    Protein Accession:
    Q8NBZ9
    Secondary Accessions:

    Protein attributes for NEXN-AS1 Gene

    Size:
    246 amino acids
    Molecular mass:
    25156 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NEXN-AS1 Gene

Proteomics data for NEXN-AS1 Gene at MOPED

Post-translational modifications for NEXN-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NEXN-AS1 Gene

Domains for NEXN-AS1 Gene

Gene Families for NEXN-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for NEXN-AS1 Gene

ProtoNet:
genes like me logo Genes that share domains with NEXN-AS1: view

No data available for UniProtKB/Swiss-Prot for NEXN-AS1 Gene

Function for NEXN-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NEXN-AS1 Gene

Localization for NEXN-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for NEXN-AS1 Gene

Pathways for NEXN-AS1 Gene

SuperPathways for NEXN-AS1 Gene

No Data Available

Interacting Proteins for NEXN-AS1 Gene

Gene Ontology (GO) - Biological Process for NEXN-AS1 Gene

None

No data available for Pathways by source for NEXN-AS1 Gene

Transcripts for NEXN-AS1 Gene

mRNA/cDNA for NEXN-AS1 Gene

(2) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NEXN-AS1 Gene

NEXN antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NEXN-AS1 Gene

No ASD Table

Relevant External Links for NEXN-AS1 Gene

GeneLoc Exon Structure for
NEXN-AS1
ECgene alternative splicing isoforms for
NEXN-AS1

Expression for NEXN-AS1 Gene

mRNA expression in normal human tissues for NEXN-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for NEXN-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (7.2) and Heart - Left Ventricle (5.6).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for NEXN-AS1 Gene

SOURCE GeneReport for Unigene cluster for NEXN-AS1 Gene Hs.632414

genes like me logo Genes that share expressions with NEXN-AS1: view

Orthologs for NEXN-AS1 Gene

Evolution for NEXN-AS1 Gene

ENSEMBL:
Gene Tree for NEXN-AS1 (if available)
TreeFam:
Gene Tree for NEXN-AS1 (if available)

No data available for Orthologs for NEXN-AS1 Gene

Paralogs for NEXN-AS1 Gene

No data available for Paralogs for NEXN-AS1 Gene

Variants for NEXN-AS1 Gene

Sequence variations from dbSNP and Humsavar for NEXN-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1626757 -- 77,884,587(+) cctat(A/T)atccc intron-variant
rs1780046 -- 77,884,431(+) tcatt(G/T)ggtgt intron-variant
rs2032056 -- 77,881,104(+) ACTTC(A/T)GGTTT downstream-variant-500B
rs4031840 -- 77,882,019(-) ATTTG(-/TGTATTGTA/TTGTA)TTGTA intron-variant
rs9724722 -- 77,884,619(+) gggag(A/G)atgct intron-variant

Relevant External Links for NEXN-AS1 Gene

HapMap Linkage Disequilibrium report
NEXN-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for NEXN-AS1 Gene

Disorders for NEXN-AS1 Gene

No disorders were found for NEXN-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for NEXN-AS1 Gene

Publications for NEXN-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4

Products for NEXN-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate NEXN-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for NEXN-AS1
    • Block miRNA regulation of NEXN-AS1 using miScript Target Protectors

    Sources for NEXN-AS1 Gene

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