NEURL1B Gene
protein-coding GIFtS : 40
GCID: GC05 P172068
neuralized homolog 1B (Drosophila)
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Aliasesfor NEURL1B gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Neuralized Homolog 1B (Drosophila) 1 2 HNeur21 Neuralized-Like Protein 1B2 3 Neur21 Neuralized-Like Protein 32 3 Neuralized 2 Alternative Protein2 NEURL32 3 Neuralized-23 DKFZP761M15111 EC 6.3.2.-3 Neur21 NEUR23 E3 Ubiquitin-Protein Ligase NEURL1B2 Neuralized-23 E3 Ubiquitin-Protein Ligase NEURL32
Export aliases for NEURL1B gene to outside databases Previous GC identifers: GC05P172002 GC05P167163
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Summariesfor NEURL1B gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: NEU1B_HUMAN, A8MQ27 Function : E3 ubiquitin-protein ligase involved in regulation of the Notch pathway through influencing the stability andactivity of several Notch ligands
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Genomic Viewsfor NEURL1B gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000005.9 NC_018916.1 NT_023133.13 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the NEURL1B gene promoter: Pax-5 CUTL1 Meis-1b HEN1 AREB6 SRY STAT3 Meis-1a NF-kappaB1 Meis-1 Other transcription factors Search SABiosciences Chromatin IP Primers for NEURL1B Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat NEURL1B
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 5q35.1 Ensembl cytogenetic band: 5q35.1 HGNC cytogenetic band: 5q35.1 NEURL1B Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 5 GeneLoc Exon Structure
GeneLoc location for GC05P172068: view genomic region
(about GC identifiers )
Start:
172,068,269 bp from pter
End:
172,118,543 bp from pter
Size:
50,275 bases
Orientation:
plus strand
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Proteinsfor NEURL1B gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: NEU1B_HUMAN, A8MQ27 (See
protein sequence )Recommended Name: E3 ubiquitin-protein ligase NEURL1B Size : 555 amino acids; 59270 Da
Subunit : Interacts with JAG1, DLL1 and DLL4
Subcellular location : Cytoplasm
Secondary accessions : C9DQJ5 C9DQJ6 C9DQJ7Alternative splicing : 3 isoforms : A8MQ27-1 A8MQ27-2 A8MQ27-3 Explore the universe of human proteins at neXtProt for NEURL1B: NX_A8MQ27 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_A8MQ27 NEURL1B Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_001136123.1 ENSEMBL proteins: ENSP00000429797 ENSP00000430001 ENSP00000358815 Reactome Protein details: A8MQ27 Human Recombinant Protein Products: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005737 cytoplasm
IEA --
NEURL1B for ontologies About GeneDecksing NEURL1B Antibody Products: Assay Products for NEURL1B:
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Protein
Domains / Familiesfor NEURL1B gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
NEURL1B for domains About GeneDecksing 3 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry A8MQ27 ProtoNet protein and cluster: A8MQ27
UniProtKB/Swiss-Prot: NEU1B_HUMAN, A8MQ27 Similarity : Contains 2 NHR (neuralized homology repeat) domainsSimilarity : Contains 1 RING-type zinc finger
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Functionfor NEURL1B gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: NEU1B_HUMAN, A8MQ27 Function : E3 ubiquitin-protein ligase involved in regulation of the Notch pathway through influencing the stability andactivity of several Notch ligands Enzyme Number (IUBMB): EC 6.3.2.- 1
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NEURL1B (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NEURL1BOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: NEURL1B (NM_001142651 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for NEURL1B Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat NEURL1B
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NEURL1B
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0008270 zinc ion binding
IEA -- GO:0016874 ligase activity
IEA --
NEURL1B for ontologies About GeneDecksing
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Pathways & Interactionsfor NEURL1B gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Signaling by NOTCH1 t(7 9)(NOTCH1:M1580_K2555) Translocation Mutant 2 NOTCH2 Activation and Transmission of Signal to the Nucleus 3 Disease 4 Signaling by GPCR
Pathway sources See GeneCards unified pathways Show all pathways 5/16
Reactome Pathways for NEURL1B (see all 16 )UniProtKB/Swiss-Prot: NEU1B_HUMAN, A8MQ27 Pathway : Protein modification; protein ubiquitination
NEURL1B for pathways About GeneDecksing Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for NEURL1B 5/6 Interacting proteins for NEURL1B (A8MQ27 3 ) via UniProtKB, MINT, STRING, and/or I2D (see all 6 )
About this table Gene Ontology (GO): 2 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0007219 Notch signaling pathway
IEA -- GO:0016567 protein ubiquitination
IEA --
NEURL1B for ontologies About GeneDecksing
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Drugs & Compoundsfor NEURL1B gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for NEURL1B Search CenterWatch for drugs/clinical trials and news about NEURL1B / NEU1B
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Transcriptsfor NEURL1B gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for NEURL1B gene: NM_001142651.1 Unigene Cluster for NEURL1B:
Neuralized homolog 1B (Drosophila) Hs.91521 [show with all ESTs ] Unigene Representative Sequence: NM_001142651 3 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000520919 ENST00000522853 ENST00000369800 (uc003mbt.3 uc021yhs.1 uc021yht.1 )Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NEURL1B (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NEURL1BOriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: NEURL1B (NM_001142651 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for NEURL1B Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat NEURL1B
Additional cDNA sequence: AK026748.1 AK091605.1 AK096661.1 AK126311.1 AL137347.1 GQ414757.1 GQ414758.1 GQ414759.1
5 DOTS entries : DT.115529 DT.91966891
DT.100755393 DT.75104332 DT.120796631 GeneLoc Exon Structure
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Expression for NEURL1B gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section NEURL1B expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TCTTCTTTTT
About this image NEURL1B expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See NEURL1B Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for NEURL1B SOURCE GeneReport for Unigene cluster: Hs.91521 UniProtKB/Swiss-Prot: NEU1B_HUMAN, A8MQ27 Tissue specificity : Highest expression in brain, prostate and small intestine. In the brain the levels are higher infetal than in adult stage. In the adult brain the highest levels are detected in the olfactory system, cerebellar cortex, optic nerve and the frontal lobe SABiosciences Custom PCR Arrays for NEURL1B Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for NEURL1BBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat NEURL1B QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat NEURL1B QIAGEN QuantiFast Probe-based Assays in human , mouse , rat NEURL1B In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NEURL1B
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Orthologsfor NEURL1B gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for NEURL1B gene from 6/19 species (see all 19 ) About this table
ENSEMBL Gene Tree for NEURL1B (if available)TreeFam Gene Tree for NEURL1B (if available)
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Paralogsfor NEURL1B gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for NEURL1B gene NEURL2 2 NEURL 2 3 SIMAP similar genes for NEURL1B using alignment to 1 protein entry: NEU1B_HUMAN :NEURL3 MDM2 NEURL
NEURL1B for paralogs About GeneDecksing 1 Pseudogenes.org Pseudogene for NEURL1B PGOHUM00000250440
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Genomic Variantsfor NEURL1B gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 5 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for NEURL1B (172068269 - 172118543 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 8 variations for NEURL1B 8 CNVs : 53358 2608 81124 8500 9524 37741 3587 8501
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing NEURL1B
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Disorders
/ Diseasesfor NEURL1B gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section --
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Publicationsfor NEURL1B gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for NEURL1B gene integrated from 9 sources : (articles sorted by number of sources associating them with NEURL1B) Utopia : connect your pdf to the dynamic world of online information
Neuralized-2: Expression in human and rodents and interaction with Delta-like ligands. (PubMed id 19723503) 1 , 2 Rullinkov G....Timmusk T. (2009) Neuralized-2 regulates a Notch ligand in cooperation with Mind bomb-1. (PubMed id 17003037) 1 , 3 Song R....Kong Y.Y. (2006) The DNA sequence and comparative analysis of human chromosome 5. (PubMed id 15372022) 1 , 2 Schmutz J.... Rubin E.M. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 Ota T.... Sugano S. (2004)
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External Searches for NEURL1B gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing NEURL1B gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing NEURL1B gene
(According to HUGE )
About This Section --
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Specialized Databases showing NEURL1B gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for NEURL1B Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for NEURL1B gene: Search GeneIP for patents involving NEURL1B GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor NEURL1B gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for NEURL1B OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for NEURL1B OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for NEURL1B OriGene Protein Over-expression Lysate for NEURL1B Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for NEURL1B Browse 3'-UTR reporter clones for miRNA target validation OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NEURL1B OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NEURL1B Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for NEURL1B OriGene Custom Protein Services for NEURL1B OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat NEURL1B QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing NEURL1B QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat NEURL1B QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat NEURL1B QIAGEN QuantiFast Probe-based Assays in human , mouse , rat NEURL1B QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat NEURL1B
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