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Aliases for NEK5 Gene

Aliases for NEK5 Gene

  • NIMA Related Kinase 5 2 3 5
  • EC 2.7.11.1 4 58
  • NIMA (Never In Mitosis Gene A)-Related Kinase 5 2
  • Never In Mitosis A-Related Kinase 5 4
  • NimA-Related Protein Kinase 5 4
  • EC 2.7.11 58

External Ids for NEK5 Gene

Previous GeneCards Identifiers for NEK5 Gene

  • GC13U990078
  • GC13M051537
  • GC13M052610
  • GC13M033427

Summaries for NEK5 Gene

GeneCards Summary for NEK5 Gene

NEK5 (NIMA Related Kinase 5) is a Protein Coding gene. GO annotations related to this gene include transferase activity, transferring phosphorus-containing groups and protein tyrosine kinase activity. An important paralog of this gene is NEK1.

Additional gene information for NEK5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NEK5 Gene

Genomics for NEK5 Gene

Regulatory Elements for NEK5 Gene

Enhancers for NEK5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13H051995 1.3 Ensembl ENCODE 17.8 +132.6 132620 5 FOXA2 MLX ARID4B FEZF1 DMAP1 YY1 TCF12 GLIS2 SP5 NFYC ATP7B NEK3 NEK5 TPTE2P2 UTP14C CCDC70 ENSG00000231856 DHRS12 FABP5P2
GH13H051725 1.7 FANTOM5 Ensembl ENCODE dbSUPER 9.9 +401.5 401456 6 CTCF FOXA2 MAX EBF1 RAD21 RARA YY1 TEAD3 FOSL1 POLR2A DHRS12 WDFY2 ENSG00000231856 NEK5 CKAP2 PIR45932 ATP5F1P1
GH13H051820 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.4 +306.0 305959 7 ZFP64 HLF CEBPB MAX CEBPG REST ATF2 MEF2D POLR2A NBN DHRS12 ENSG00000231856 CCDC70 NEK5 WDFY2 TMEM272
GH13H052158 1.6 Ensembl ENCODE dbSUPER 7.9 -30.7 -30656 5 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 TCF12 ZNF121 NEK3 TPTE2P2 ATP7B NEK5 THSD1P1
GH13H052186 1.1 ENCODE dbSUPER 10.7 -57.7 -57671 2 HDAC1 PKNOX1 ARID4B BMI1 TCF12 ZNF766 GATA2 ATF7 CREM USF2 NEK3 NEK5 CCDC70 ALG11 VPS36 ATP7B DHRS12 ENSG00000231856 ENSG00000244471 MRPS31P5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NEK5 on UCSC Golden Path with GeneCards custom track

Promoters for NEK5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000063096 1666 1401 ARID4B SIN3A DMAP1 ZNF2 GLIS2 ZNF143 ATF7 SP3 MXD4 REST

Genomic Location for NEK5 Gene

Chromosome:
13
Start:
52,033,611 bp from pter
End:
52,130,366 bp from pter
Size:
96,756 bases
Orientation:
Minus strand

Genomic View for NEK5 Gene

Genes around NEK5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NEK5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NEK5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NEK5 Gene

Proteins for NEK5 Gene

  • Protein details for NEK5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6P3R8-NEK5_HUMAN
    Recommended name:
    Serine/threonine-protein kinase Nek5
    Protein Accession:
    Q6P3R8
    Secondary Accessions:
    • Q5TAP5

    Protein attributes for NEK5 Gene

    Size:
    708 amino acids
    Molecular mass:
    81445 Da
    Cofactor:
    Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
    Quaternary structure:
    No Data Available

neXtProt entry for NEK5 Gene

Selected DME Specific Peptides for NEK5 Gene

Q6P3R8:
  • GTPYYLSPE
  • SPRDRPSI

Post-translational modifications for NEK5 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Domains & Families for NEK5 Gene

Gene Families for NEK5 Gene

IUPHAR :
Human Protein Atlas (HPA):
  • Enzymes
  • Predicted intracellular proteins

Protein Domains for NEK5 Gene

Suggested Antigen Peptide Sequences for NEK5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6P3R8

UniProtKB/Swiss-Prot:

NEK5_HUMAN :
  • Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.
Family:
  • Belongs to the protein kinase superfamily. NEK Ser/Thr protein kinase family. NIMA subfamily.
genes like me logo Genes that share domains with NEK5: view

Function for NEK5 Gene

Molecular function for NEK5 Gene

UniProtKB/Swiss-Prot CatalyticActivity:
ATP + a protein = ADP + a phosphoprotein.

Enzyme Numbers (IUBMB) for NEK5 Gene

Phenotypes From GWAS Catalog for NEK5 Gene

Gene Ontology (GO) - Molecular Function for NEK5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004672 protein kinase activity IEA --
GO:0004674 protein serine/threonine kinase activity IEA --
GO:0005524 ATP binding IEA --
GO:0016301 kinase activity IEA --
GO:0016740 transferase activity IEA --
genes like me logo Genes that share ontologies with NEK5: view
genes like me logo Genes that share phenotypes with NEK5: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for NEK5
  • Applied Biological Materials Clones for NEK5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NEK5 Gene

Localization for NEK5 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for NEK5 gene
Compartment Confidence
cytosol 3
cytoskeleton 1
mitochondrion 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NEK5 Gene

Pathways & Interactions for NEK5 Gene

No Data Available

Interacting Proteins for NEK5 Gene

Gene Ontology (GO) - Biological Process for NEK5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006468 protein phosphorylation IEA --
GO:0016310 phosphorylation IEA --
GO:0051155 positive regulation of striated muscle cell differentiation IEA --
GO:2001056 positive regulation of cysteine-type endopeptidase activity IEA --
genes like me logo Genes that share ontologies with NEK5: view

No data available for Pathways by source and SIGNOR curated interactions for NEK5 Gene

Drugs & Compounds for NEK5 Gene

(2) Drugs for NEK5 Gene - From: HMDB

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
ATP Nutra Agonist 0
Magnesium Nutra 0

(1) Additional Compounds for NEK5 Gene - From: HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
ADP
  • Adenosindiphosphorsaeure
  • Adenosine 5'-pyrophosphate
  • Adenosine diphosphate
  • Adenosine pyrophosphate
  • Adenosine-5'-diphosphate
Full agonist, Agonist 58-64-0
genes like me logo Genes that share compounds with NEK5: view

Transcripts for NEK5 Gene

mRNA/cDNA for NEK5 Gene

(7) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(13) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NEK5 Gene

NIMA-related kinase 5:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for NEK5
  • Applied Biological Materials Clones for NEK5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for NEK5 Gene

No ASD Table

Relevant External Links for NEK5 Gene

GeneLoc Exon Structure for
NEK5
ECgene alternative splicing isoforms for
NEK5

Expression for NEK5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NEK5 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for NEK5 Gene

This gene is overexpressed in Testis (x15.4) and Fallopian Tube (x4.1).

Protein differential expression in normal tissues from HIPED for NEK5 Gene

This gene is overexpressed in Serum (68.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for NEK5 Gene



Protein tissue co-expression partners for NEK5 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of NEK5 Gene:

NEK5

SOURCE GeneReport for Unigene cluster for NEK5 Gene:

Hs.672144
genes like me logo Genes that share expression patterns with NEK5: view

Primer Products

No data available for mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NEK5 Gene

Orthologs for NEK5 Gene

This gene was present in the common ancestor of chordates.

Orthologs for NEK5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NEK5 34 33
  • 99.53 (n)
OneToOne
cow
(Bos Taurus)
Mammalia NEK5 34 33
  • 85.6 (n)
OneToOne
rat
(Rattus norvegicus)
Mammalia Nek5 33
  • 79.79 (n)
mouse
(Mus musculus)
Mammalia Nek5 34 16 33
  • 79.65 (n)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia NEK5 34
  • 52 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia NEK5 34
  • 50 (a)
OneToOne
chicken
(Gallus gallus)
Aves NEK5 33 34
  • 64.38 (n)
lizard
(Anolis carolinensis)
Reptilia NEK5 34
  • 52 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia nek5 33
  • 61.78 (n)
African clawed frog
(Xenopus laevis)
Amphibia Xl.15191 33
zebrafish
(Danio rerio)
Actinopterygii NEK5 34
  • 59 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 61 (a)
OneToMany
Species where no ortholog for NEK5 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NEK5 Gene

ENSEMBL:
Gene Tree for NEK5 (if available)
TreeFam:
Gene Tree for NEK5 (if available)

Paralogs for NEK5 Gene

Paralogs for NEK5 Gene

(22) SIMAP similar genes for NEK5 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with NEK5: view

Variants for NEK5 Gene

Sequence variations from dbSNP and Humsavar for NEK5 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000018567 -- 52,129,714(+) ACCTC(A/T)CACAC nc-transcript-variant, upstream-variant-2KB
rs1000059191 -- 52,082,247(+) GAGGC(G/T)GAGGT intron-variant, reference, synonymous-codon
rs1000076538 -- 52,129,617(+) AAAAA(A/C)ATGTA nc-transcript-variant, upstream-variant-2KB
rs1000104736 -- 52,094,611(+) ACCCC(A/G)TCTCT intron-variant
rs1000186218 -- 52,073,474(+) CCACA(C/T)CCAGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NEK5 Gene

Variant ID Type Subtype PubMed ID
dgv1652n100 CNV loss 25217958
esv2549303 CNV deletion 19546169
esv2747423 CNV deletion 23290073
esv2747424 CNV deletion 23290073
nsv1037567 CNV gain 25217958

Variation tolerance for NEK5 Gene

Residual Variation Intolerance Score: 73.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 6.16; 75.80% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for NEK5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NEK5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NEK5 Gene

Disorders for NEK5 Gene

Relevant External Links for NEK5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NEK5

No disorders were found for NEK5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NEK5 Gene

Publications for NEK5 Gene

  1. The DNA sequence and analysis of human chromosome 13. (PMID: 15057823) Dunham A … Ross MT (Nature 2004) 3 4 60
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 60
  3. The NIMA kinase: a mitotic regulator in Aspergillus nidulans and vertebrate cells. (PMID: 9552363) Lu KP … Hunter T (Progress in cell cycle research 1995) 2 3 60
  4. An organelle-specific protein landscape identifies novel diseases and molecular mechanisms. (PMID: 27173435) Boldt K … UK10K Rare Diseases Group (Nature communications 2016) 3 60
  5. Nek5 interacts with mitochondrial proteins and interferes negatively in mitochondrial mediated cell death and respiration. (PMID: 25725288) Melo Hanchuk TD … Kobarg J (Cellular signalling 2015) 3 60

Products for NEK5 Gene

  • Addgene plasmids for NEK5

Sources for NEK5 Gene

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