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Aliases for NEFLP1 Gene

Subcategory (RNA class) for NEFLP1 Gene

lncRNA

Aliases for NEFLP1 Gene

  • Neurofilament Light Pseudogene 1 2 3 5
  • Neurofilament, Light Polypeptide Pseudogene 1 2

External Ids for NEFLP1 Gene

ORGUL Members for NEFLP1 Gene

Previous GeneCards Identifiers for NEFLP1 Gene

  • GC0YM021792
  • GC0YM023383
  • GC0YM016963

Summaries for NEFLP1 Gene

GeneCards Summary for NEFLP1 Gene

NEFLP1 (Neurofilament Light Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NEFLP1 Gene

Genomics for NEFLP1 Gene

Regulatory Elements for NEFLP1 Gene

Enhancers for NEFLP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0YG021239 0.7 FANTOM5 ENCODE 0.4 -19.3 -19264 3.8 NEFLP1 PIR44128
GH0YG021247 0.6 FANTOM5 ENCODE 0.3 -27.5 -27534 3.8 NEFLP1 PIR44128
GH0YG021260 0.4 ENCODE 0.3 -38.5 -38501 0.2 CTCF NEFLP1 PIR44128
GH0YG021192 0.3 FANTOM5 0.3 +29.3 29285 0.5 PIR58490 NEFLP1
GH0YG021246 0.2 ENCODE 0.3 -24.9 -24879 1.1 NEFLP1 PIR44128
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NEFLP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NEFLP1 Gene

Chromosome:
Y
Start:
21,221,106 bp from pter
End:
21,222,089 bp from pter
Size:
984 bases
Orientation:
Minus strand

Genomic View for NEFLP1 Gene

Genes around NEFLP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NEFLP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NEFLP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NEFLP1 Gene

Proteins for NEFLP1 Gene

Post-translational modifications for NEFLP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NEFLP1 Gene

Domains & Families for NEFLP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NEFLP1 Gene

Function for NEFLP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NEFLP1 Gene

Localization for NEFLP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NEFLP1 Gene

Pathways & Interactions for NEFLP1 Gene

SuperPathways for NEFLP1 Gene

No Data Available

Interacting Proteins for NEFLP1 Gene

Gene Ontology (GO) - Biological Process for NEFLP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NEFLP1 Gene

Drugs & Compounds for NEFLP1 Gene

No Compound Related Data Available

Transcripts for NEFLP1 Gene

mRNA/cDNA for NEFLP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NEFLP1 Gene

No ASD Table

Relevant External Links for NEFLP1 Gene

GeneLoc Exon Structure for
NEFLP1
ECgene alternative splicing isoforms for
NEFLP1

Expression for NEFLP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NEFLP1 Gene

mRNA differential expression in normal tissues according to GTEx for NEFLP1 Gene

This gene is overexpressed in Spleen (x24.4).

NURSA nuclear receptor signaling pathways regulating expression of NEFLP1 Gene:

NEFLP1
genes like me logo Genes that share expression patterns with NEFLP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NEFLP1 Gene

Orthologs for NEFLP1 Gene

Evolution for NEFLP1 Gene

ENSEMBL:
Gene Tree for NEFLP1 (if available)
TreeFam:
Gene Tree for NEFLP1 (if available)

No data available for Orthologs for NEFLP1 Gene

Paralogs for NEFLP1 Gene

No data available for Paralogs for NEFLP1 Gene

Variants for NEFLP1 Gene

Relevant External Links for NEFLP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NEFLP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NEFLP1 Gene

Disorders for NEFLP1 Gene

No disorders were found for NEFLP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NEFLP1 Gene

Publications for NEFLP1 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 2 3 64
  2. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64

Products for NEFLP1 Gene

Sources for NEFLP1 Gene

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