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Aliases for NEDD8-MDP1 Gene

Aliases for NEDD8-MDP1 Gene

  • NEDD8-MDP1 Readthrough 2 3

External Ids for NEDD8-MDP1 Gene

Summaries for NEDD8-MDP1 Gene

Entrez Gene Summary for NEDD8-MDP1 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring NEDD8 (neural precursor cell expressed, developmentally down-regulated 8) and MDP1 (magnesium-dependent phosphatase 1) genes on chromosome 14. The read-through transcript encodes a fusion protein that shares sequence identity with the products of each individual gene. [provided by RefSeq, Dec 2010]

GeneCards Summary for NEDD8-MDP1 Gene

NEDD8-MDP1 (NEDD8-MDP1 Readthrough) is a Protein Coding gene. An important paralog of this gene is MDP1.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NEDD8-MDP1 Gene

Genomics for NEDD8-MDP1 Gene

Genomic Location for NEDD8-MDP1 Gene

Start:
24,213,937 bp from pter
End:
24,232,370 bp from pter
Size:
18,434 bases
Orientation:
Minus strand

Genomic View for NEDD8-MDP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NEDD8-MDP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NEDD8-MDP1 Gene

No data available for Regulatory Elements for NEDD8-MDP1 Gene

Proteins for NEDD8-MDP1 Gene

  • Protein details for NEDD8-MDP1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    E9PL57-E9PL57
    Recommended name:
    Protein NEDD8-MDP1
    Protein Accession:
    E9PL57
    Secondary Accessions:

    Protein attributes for NEDD8-MDP1 Gene

    Size:
    170 amino acids
    Molecular mass:
    19536 Da
    Quaternary structure:
    No Data Available
  • Protein details for NEDD8-MDP1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    E9PS38-E9PS38
    Recommended name:
    Protein NEDD8-MDP1
    Protein Accession:
    E9PS38
    Secondary Accessions:

    Protein attributes for NEDD8-MDP1 Gene

    Size:
    67 amino acids
    Molecular mass:
    7745 Da
    Quaternary structure:
    No Data Available
  • Protein details for NEDD8-MDP1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    S4R3E9-S4R3E9
    Recommended name:
    Protein NEDD8-MDP1
    Protein Accession:
    S4R3E9
    Secondary Accessions:

    Protein attributes for NEDD8-MDP1 Gene

    Size:
    84 amino acids
    Molecular mass:
    9672 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NEDD8-MDP1 Gene

Proteomics data for NEDD8-MDP1 Gene at MOPED

Post-translational modifications for NEDD8-MDP1 Gene

No Post-translational modifications

Other Protein References for NEDD8-MDP1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for NEDD8-MDP1 Gene

Domains for NEDD8-MDP1 Gene

Protein Domains for NEDD8-MDP1 Gene

genes like me logo Genes that share domains with NEDD8-MDP1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for NEDD8-MDP1 Gene

Function for NEDD8-MDP1 Gene

Gene Ontology (GO) - Molecular Function for NEDD8-MDP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
GO:0016791 phosphatase activity --
genes like me logo Genes that share ontologies with NEDD8-MDP1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NEDD8-MDP1 Gene

Localization for NEDD8-MDP1 Gene

No data available for Gene Ontology (GO) - Cellular Components for NEDD8-MDP1 Gene

Pathways for NEDD8-MDP1 Gene

SuperPathways for NEDD8-MDP1 Gene

No Data Available

Interacting Proteins for NEDD8-MDP1 Gene

Gene Ontology (GO) - Biological Process for NEDD8-MDP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016311 dephosphorylation --
genes like me logo Genes that share ontologies with NEDD8-MDP1: view

No data available for Pathways by source for NEDD8-MDP1 Gene

Transcripts for NEDD8-MDP1 Gene

mRNA/cDNA for NEDD8-MDP1 Gene

(1) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NEDD8-MDP1 Gene

No ASD Table

Relevant External Links for NEDD8-MDP1 Gene

GeneLoc Exon Structure for
NEDD8-MDP1
ECgene alternative splicing isoforms for
NEDD8-MDP1

Expression for NEDD8-MDP1 Gene

mRNA expression in normal human tissues for NEDD8-MDP1 Gene

mRNA expression in normal human tissues for NEDD8-MDP1 Gene
genes like me logo Genes that share expressions with NEDD8-MDP1: view

Orthologs for NEDD8-MDP1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for NEDD8-MDP1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NEDD8-MDP1 37
  • 94 (a)
OneToOne
cow
(Bos Taurus)
Mammalia MDP-1 37
  • 64 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Mdp1 37
  • 61 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 55 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 56 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 37
  • 64 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii MDP1 37
  • 38 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes -- 37
  • 21 (a)
OneToMany
Species with no ortholog for NEDD8-MDP1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NEDD8-MDP1 Gene

ENSEMBL:
Gene Tree for NEDD8-MDP1 (if available)
TreeFam:
Gene Tree for NEDD8-MDP1 (if available)

Paralogs for NEDD8-MDP1 Gene

Paralogs for NEDD8-MDP1 Gene

Selected SIMAP similar genes for NEDD8-MDP1 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with NEDD8-MDP1: view

Variants for NEDD8-MDP1 Gene

Relevant External Links for NEDD8-MDP1 Gene

HapMap Linkage Disequilibrium report
NEDD8-MDP1

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for NEDD8-MDP1 Gene

Disorders for NEDD8-MDP1 Gene

No disorders were found for NEDD8-MDP1 Gene.

No data available for UniProtKB/Swiss-Prot for NEDD8-MDP1 Gene

Publications for NEDD8-MDP1 Gene

  1. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3
  2. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3
  3. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  4. Global identification of modular cullin-RING ligase substrates. (PMID: 21963094) Emanuele M.J. … Elledge S.J. (Cell 2011) 3
  5. Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels. (PMID: 21987572) Lee K.A. … Doedens J.R. (J. Biol. Chem. 2011) 3

Products for NEDD8-MDP1 Gene

Sources for NEDD8-MDP1 Gene

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