Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

NEDD8 Gene

protein-coding   GIFtS: 62
GCID: GC14M024686

neural precursor cell expressed, developmentally down-regulated...

 Explore 16 diseases affiliated with
NEDD8 via our new
 Human Malady Compendium 
Biological research products
for NEDD8
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Neural Precursor Cell Expressed, Developmentally Down-Regulated 81 2     Neddylin3
Ubiquitin-Like Protein Nedd82 3     Neddylin3
NEDD-82 3     Neural Precursor Cell Expressed Developmentally Down-Regulated Protein 83
Nedd-81     

External Ids:    HGNC: 77321   Entrez Gene: 47382   Ensembl: ENSG000001295597   OMIM: 6031715   UniProtKB: Q158433   

Export aliases for NEDD8 gene to outside databases

Previous GC identifers: GC14M022058 GC14M018473 GC14M022674 GC14M022676 GC14M023755 GC14M004801


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: NEDD8_HUMAN, Q15843
Function: Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent
attachment to its substrates requires prior activation by the E1 complex UBE1C-APPBP1 and linkage to the E2 enzyme
UBE2M. Attachment of NEDD8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes
polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins

Gene Wiki entry for NEDD8


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000014.8  NC_018925.1  NT_026437.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the NEDD8 gene promoter:
         POU2F1   POU2F1a   POU3F2 (N-Oct-5a)   POU3F2 (N-Oct-5b)   POU3F2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidNEDD8 promoter sequence
   Search SABiosciences Chromatin IP Primers for NEDD8

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NEDD8


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 14q12   Ensembl cytogenetic band:  14q12   HGNC cytogenetic band: 14q11.2

NEDD8 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
NEDD8 gene location

GeneLoc information about chromosome 14         GeneLoc Exon Structure

GeneLoc location for GC14M024686:  view genomic region     (about GC identifiers)

Start:
24,686,057 bp from pter      End:
24,701,660 bp from pter
Size:
15,604 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: NEDD8_HUMAN, Q15843 (See protein sequence)
Recommended Name: NEDD8 precursor  
Size: 81 amino acids; 9072 Da
Subunit: Directly interacts with NUB1 and AHR. Covalently attached to cullins and p53
Subcellular location: Nucleus. Note=Mainly nuclear
6/15 PDB 3D structures from and Proteopedia for NEDD8 (see all 15):
1NDD (3D)        1R4M (3D)        1R4N (3D)        1XT9 (3D)        2BKR (3D)        2KO3 (3D)    
Secondary accessions: Q3SXN8 Q6LES6

Explore the universe of human proteins at neXtProt for NEDD8: NX_Q15843

Post-translational modifications:

  • Cleavage of precursor form by UCHL3 or SENP8 is necessary for function1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q15843

  • NEDD8 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_006147.1  
    ENSEMBL proteins: 
     ENSP00000250495   ENSP00000380040   ENSP00000448192  

    Human Recombinant Protein Products: 
    EMD Millipore Purified and/or Recombinant NEDD8 Protein
    R&D Systems Recombinant & Natural Proteins for NEDD8
    Enzo Life Sciences proteins for NEDD8
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for NEDD8 
    GenScript Custom Purified and Recombinant Proteins Services for NEDD8
    Novus Biologicals NEDD8 Proteins
    Browse Sino Biological Recombinant Proteins
    ProSpec Recombinant Protein for NEDD8
    Uscn Proteins for NEDD8

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--


    NEDD8 for ontologies           About GeneDecksing



    NEDD8 Antibody Products: 
    EMD Millipore Mono- and Polyclonal Antibodies for the study of NEDD8
    R&D Systems Antibodies for NEDD8
    Cell Signaling Technology (CST) Antibodies for NEDD8 
    OriGene Antibodies: NEDD8
    OriGene Custom Antibody Services for NEDD8 
    GenScript Custom Superior Antibodies Services for NEDD8
    Novus Biologicals NEDD8 Antibodies
    Abcam antibodies for NEDD8 
    Uscn Antibodies for NEDD8
    ThermoFisher Antibody for NEDD8

    Assay Products for NEDD8: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    R&D Systems Ubiquitin Proteasome Pathway (UPP) Assay Kits & Reagents for NEDD8
    GenScript Custom Assay Services for NEDD8
    Enzo Life Sciences assays for NEDD8
    Uscn ELISAs and CLIAs for NEDD8


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    NEDD8 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR019956 Ubiquitin_subgr
     IPR019954 Ubiquitin_CS
     IPR000626 Ubiquitin
     IPR019955 Ubiquitin_supergroup

    Graphical View of Domain Structure for InterPro Entry Q15843

    ProtoNet protein and cluster: Q15843

    1 Blocks protein family: IPB000626 Ubiquitin domain

    UniProtKB/Swiss-Prot: NEDD8_HUMAN, Q15843
    Similarity: Belongs to the ubiquitin family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: NEDD8_HUMAN, Q15843
    Function: Ubiquitin-like protein which plays an important role in cell cycle control and embryogenesis. Covalent
    attachment to its substrates requires prior activation by the E1 complex UBE1C-APPBP1 and linkage to the E2 enzyme
    UBE2M. Attachment of NEDD8 to cullins activates their associated E3 ubiquitin ligase activity, and thus promotes
    polyubiquitination and proteasomal degradation of cyclins and other regulatory proteins

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: NEDD8
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat NEDD8
    2 QIAGEN miScript miRNA Assays for microRNAs that regulate NEDD8:
    hsa-miR-532-3p hsa-miR-1322
    SwitchGear 3'UTR luciferase reporter plasmidNEDD8 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for NEDD8 (see all 7)
    OriGene shRNA RFP: NEDD8
    OriGene siRNA: NEDD8
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat NEDD8

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for NEDD8

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for NEDD8 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for NEDD8
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: NEDD8 (NM_006156)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for NEDD8
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NEDD8 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for NEDD8
    Search LifeMap BioReagents cell lines for NEDD8

    In Situ Assay
    Products:
       

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for NEDD8

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding ----
    GO:0031625ubiquitin protein ligase binding IPI15694336


    NEDD8 for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for NEDD8:
     Cell cycle / mitosis defect  Synthetic lethal with Ras 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Cell cycle_Role of SCF complex in cell cycle regulation
    Cell cycle_Role of SCF complex in cell cycle regulation1.00
    Cell cycle Role of SCF complex in cell cycle regulation0.98
    2Protein Stability
    Protein Stability1.00
    3AHR Pathway
    AHR Pathway1.00
    4p53 pathway
    p53 pathway1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for NEDD8
        Cell cycle Role of SCF complex in cell cycle regulation

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for NEDD8
        AHR Pathway

    1 Cell Signaling Technology (CST) Pathway for NEDD8
        Protein Stability

    1 GeneGo (Thomson Reuters) Pathway for NEDD8
        Cell cycle Role of SCF complex in cell cycle regulation

    1 BioSystems Pathway for NEDD8 
        p53 pathway



    NEDD8 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for NEDD8

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/231 Interacting proteins for NEDD8 (Q158432, 3 ENSP000002504954) via UniProtKB, MINT, STRING, and/or I2D (see all 231)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CUL1Q136162, 3, ENSP000003268044MINT-6542674 MINT-4544716 MINT-8092276 MINT-7294697 I2D: score=5 STRING: ENSP00000326804
    CUL2Q136172, 3, ENSP000003638804MINT-8295466 MINT-8295524 MINT-6542674 MINT-8295501 I2D: score=3 STRING: ENSP00000363880
    RPL11P629132, 3, ENSP000003636764MINT-7294622 MINT-6542674 MINT-6541111 MINT-7294570 I2D: score=2 STRING: ENSP00000363676
    RPL9P329692, 3, ENSP000003460224MINT-6542674 I2D: score=1 STRING: ENSP00000346022
    NUB1Q9Y5A72, 3, ENSP000003986444MINT-50774 MINT-50772 MINT-50773 I2D: score=1 STRING: ENSP00000398644
    About this table

    Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006357regulation of transcription from RNA polymerase II promoter IEA--
    GO:0006464cellular protein modification process TAS9694792
    GO:0006508proteolysis TAS9694792
    GO:0006511ubiquitin-dependent protein catabolic process TAS9353319
    GO:0008104protein localization IEA--


    NEDD8 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    NEDD8 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for NEDD8
    5 Novoseek chemical compound relationships for NEDD8 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    lysine 52 9 17439941 (1), 18096514 (1), 11675391 (1), 15537541 (1) (see all 8)
    cysteine 30.7 3 18782863 (1), 16980297 (1)
    atp 0 1 12740388 (1)
    steroid 0 1 11818503 (1)
    arginine 0 1 14690597 (1)

    Search CenterWatch for drugs/clinical trials and news about NEDD8 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for NEDD8 gene: 
    NM_006156.2  

    Unigene Cluster for NEDD8:

    Neural precursor cell expressed, developmentally down-regulated 8
    Hs.531064  [show with all ESTs]
    Unigene Representative Sequence: AK125214
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000250495(uc001wnn.2) ENST00000396828(uc001wno.2) ENST00000527046
    ENST00000531430 ENST00000560427 ENST00000526430 ENST00000524927 ENST00000533242(uc001wnp.2)


    miRNA
    Products:
         
    OriGene 3'-UTR Clone: NEDD8
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat NEDD8
    2 QIAGEN miScript miRNA Assays for microRNAs that regulate NEDD8:
    hsa-miR-532-3p hsa-miR-1322
    SwitchGear 3'UTR luciferase reporter plasmidNEDD8 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for NEDD8 (see all 7)
    OriGene shRNA RFP: NEDD8
    OriGene siRNA: NEDD8
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat NEDD8
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for NEDD8 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for NEDD8
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: NEDD8 (NM_006156)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for NEDD8
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NEDD8 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for NEDD8
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat NEDD8
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat NEDD8
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat NEDD8

    Additional cDNA sequence: 

    AK125214.1 BC104200.1 BC104201.1 BC104664.1 CR407662.1 D23662.1 

    13 DOTS entries:

    DT.95225587  DT.40284385  DT.455838  DT.99950778  DT.40115876  DT.87000939  DT.100845971  DT.40290821 
    DT.100042140  DT.91666339  DT.91861974  DT.100042141  DT.91915964 

    24/554 AceView cDNA sequences (see all 554):

    CB321698 BM507263 BQ949724 BC064899 BQ056166 BQ221197 BM478158 BP429915 
    AA725123 BQ632245 BQ774333 BM842036 BE395591 BC051382 AI700544 AI354437 
    AI085668 BF126026 CB109528 CF130271 BM840957 BM565531 BM710198 BQ941018 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for NEDD8    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6a · 6b
    SP1:              -     -     -     -                 -               
    SP2:                          -     -                 -               
    SP3:              -     -     -     -                                 
    SP4:              -                                                   
    SP5:                                                                  


    ECgene alternative splicing isoforms for NEDD8

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    NEDD8 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TAATTACAAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See NEDD8 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for NEDD8

    SOURCE GeneReport for Unigene cluster: Hs.531064

    UniProtKB/Swiss-Prot: NEDD8_HUMAN, Q15843
    Tissue specificity: Highly expressed in heart, skeletal muscle, spleen, thymus, prostate, testis, ovary, colon and
    leukocytes

        SABiosciences Expression via Pathway-Focused PCR Array including NEDD8: 
              Ubiquitination (Ubiquitylation) Pathway in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for NEDD8
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat NEDD8
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat NEDD8
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat NEDD8
    In Situ
    Assay Products:
     

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for NEDD8

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for NEDD8 gene from 7/25 species (see all 25)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves LOC1008587761 NEDD8-like 88(n)
    100(a)
      100858776  XM_003643561.1  XP_003643609.1 
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.29522 Xenopus laevis transcribed sequence with strong similarity more 77.98(n)    48024167 
    zebrafish
    (Danio rerio)
    Actinopterygii nedd82 neural precursor cell expressed, developmentally down-regulated more 81.39(n)   368667  BC055645.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Nedd81 , 3 protein degradation tagging3
    CG10679-PA1
    89(a)3
    75.53(n)1
    89.87(a)1
      37B73
    351511  NM_136075.21  NP_609919.11 
    worm
    (Caenorhabditis elegans)
    Secernentea ned-81 Protein NED-8 74.12(n)
    88.16(a)
      172910  NM_060316.2  NP_492717.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons RUB36
    NEDD8-like protein RUB3
    67(a)
    1 ↔ 1
    1(4045619-4045855)
    rice
    (Oryza sativa)
    Liliopsida --
    ubiquitin family protein, putative
    58(a)
    1 ↔ 1
    10(21091320-21091565)


    ENSEMBL Gene Tree for NEDD8 (if available)
    TreeFam Gene Tree for NEDD8 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for NEDD8 gene
    14 SIMAP similar genes for NEDD8 using alignment to 3 protein entries:     NEDD8_HUMAN (see all proteins):
    NEDD8-MDP1    UBC    UBBP4    UBB    RPS27A    DKFZp434K0435
    UBA52    BAG6    ZFAND4    RAD23B    UBTD2    UBL4A
    UHRF2    RAD23A

    NEDD8 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for NEDD8
    PGOHUM00000244778


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/282 NCBI SNPs in NEDD8 are shown (see all 282    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 14 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1121694921,2
    --24685662(+) GTTCTC/TCAACC 5 -- us2k1 int1 ds50012Minor allele frequency- T:0.03CSA WA 120
    rs1866793071,2
    --24685715(+) CTCTCC/TGAAGG 5 -- us2k1 ds5001 int10--------
    rs765606961,2
    --24685759(+) TGTATA/GACAAC 5 -- us2k1 ds5001 int11Minor allele frequency- G:0.01WA 118
    rs599122101,2
    C,--24686065(+) AGATTC/TCAGGA 5 -- int1 us2k1 ut312Minor allele frequency- T:0.07WA 120
    rs1128307821,2
    --24686115(+) TAAGAG/AAGGGA 5 -- ut31 us2k1 int11Minor allele frequency- A:0.50CSA 2
    rs27661,2
    C,F,H,--24686145(-) ACTGGG/ATGTTA 5 -- int1 ut31 us2k17Minor allele frequency- A:0.06MN NS EA NA 728
    rs115385881,2
    F,--24686214(-) TGTCTA/TCTGGT 5 -- us2k1 ut31 int1 ese31Minor allele frequency- T:0.06NA 120
    rs1915274991,2
    --24686217(+) AGTAGA/TCATAC 5 -- us2k1 ut31 int10--------
    rs1480283331,2
    --24686248(+) GGGGGC/TAGTGG 5 -- us2k1 int1 ut310--------
    rs1997868311,2
    --24686399(+) AAAATC/TTTGTA 6 K us2k1 int1 syn10--------

    HapMap Linkage Disequilibrium report for NEDD8 (24686057 - 24701660 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for NEDD8: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing NEDD8
    DNA2.0 Custom Variant and Variant Library Synthesis for NEDD8

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    NEDD8 for disorders           About GeneDecksing

    OMIM gene information: 603171    OMIM disorders: --

    16 diseases for NEDD8:    About MalaCards
    crimean-congo hemorrhagic fever    renal clear cell carcinoma    oral squamous cell carcinoma    squamous cell carcinoma
    hemorrhagic fever    parkinson's disease    renal cell carcinoma    lipodystrophy
    alzheimer's disease    blindness    carcinoma    prostate cancer
    breast cancer    hypoxia    prostatitis    neuronitis

    1 disease from the University of Copenhagen DISEASES database for NEDD8:
    Crimean-Congo hemorrhagic fever

    3 Novoseek disease relationships for NEDD8 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    parkinson disease 15.5 1 12533840 (1)
    alzheimers disease 0.569 1 12533840 (1)
    tumors 0 4 10318914 (2), 10585493 (1), 15242646 (1)


    Export disorders for NEDD8 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for NEDD8 gene, integrated from 9 sources (see all 207):
    (articles sorted by number of sources associating them with NEDD8)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Characterization of NEDD8, a developmentally down-regulated ubiquitin-like protein. (PubMed id 9353319)1, 2, 3, 9 Kamitani T.... Yeh E.T.H. (1997)
    2. NUB1, a NEDD8-interacting protein, is induced by interferon and down- regulates the NEDD8 expression. (PubMed id 11259415)1, 2, 9 Kito K.... Kamitani T. (2001)
    3. Crystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes. (PubMed id 9857030)1, 2, 9 Whitby F.G.... Hill C.P. (1998)
    4. Cleavage of the C-terminus of NEDD8 by UCH-L3. (PubMed id 9790970)1, 2, 9 Wada H.... Kamitani T. (1998)
    5. DEN1 is a dual function protease capable of processing the C-terminus of Nedd8 and deconjugating hyper-neddylated CUL1. (PubMed id 12759363)1, 2, 9 Wu K.... Pan Z.-Q. (2003)
    6. Covalent modification of all members of human cullin family proteins by NEDD8. (PubMed id 10597293)1, 2, 9 Hori T.... Tanaka K. (1999)
    7. Mdm2-mediated NEDD8 conjugation of p53 inhibits its transcriptional activity. (PubMed id 15242646)1, 2, 9 Xirodimas D.P.... Lane D.P. (2004)
    8. Conjugation of the ubiquitin-like protein NEDD8 to cullin-2 is linked to von Hippel-Lindau tumor suppressor function. (PubMed id 10318914)1, 2, 9 Liakopoulos D.... Pause A. (1999)
    9. The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1. (PubMed id 14690597)1, 2, 9 Walden H.... Schulman B.A. (2003)
    10. NEDP1, a highly conserved cysteine protease that deneddylates cullins. (PubMed id 12730221)1, 2, 9 Mendoza H.M....Hay R.T. (2003)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 4738 HGNC: 7732 AceView: NEDD8 Ensembl:ENSG00000129559 euGenes: HUgn4738
    ECgene: NEDD8 H-InvDB: NEDD8

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for NEDD8 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for NEDD8 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for NEDD8 gene:
    Search GeneIP for patents involving NEDD8

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     EMD Millipore Purified and/or Recombinant NEDD8 Protein
     Browse Small Molecules at EMD Millipore
     Browse Kits and Assays available from EMD Millipore
     EMD Millipore Mono- and Polyclonal Antibodies for the study of NEDD8
     Browse for Gene Knock-down Tools from EMD Millipore
     Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Antibodies for NEDD8 (NEDD8)   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents for NEDD8 (NEDD8)  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Recombinant/Natural Proteins for NEDD8 (NEDD8)  
     OriGene Antibodies for NEDD8   OriGene shRNA RFP for NEDD8  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for NEDD8   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for NEDD8  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for NEDD8   OriGene 3'-UTR Clone for NEDD8  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for NEDD8   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for NEDD8  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for NEDD8   OriGene Custom Protein Services for NEDD8  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat NEDD8
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing NEDD8
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NEDD8
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat NEDD8
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat NEDD8
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat NEDD8
     GenScript Custom Purified and Recombinant Proteins Services for NEDD8 GenScript cDNA clones with any tag delivered in your preferred vector for NEDD8
     GenScript Custom Assay Services for NEDD8 GenScript Custom Superior Antibodies Services for NEDD8
     GenScript Custom overexpressing Cell Line Services for NEDD8 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Antibodies & Assays for NEDD8 

     Regulatory tfbs in NEDD8 promoter
     Search Chromatin IP Primers for NEDD8
     RT2 qPCR Primer Assay in human, mouse, rat NEDD8
     GNC Network for NEDD8
     SABiosciences PCR Arrays including human, mouse, rat NEDD8
     Search Tocris compounds for NEDD8
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Assays/Proteins for NEDD8
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     NEDD8 antibodies
     NEDD8 proteins
     Antibodies for NEDD8
     See all of Abcam's Antibodies, Kits and Proteins for NEDD8
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Recombinant Protein for NEDD8




     NEDD8 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for NEDD8
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for NEDD8
     SwitchGear 3'UTR luciferase reporter plasmids for NEDD8
     SwitchGear Promoter luciferase reporter plasmids for NEDD8
     ThermoFisher Antibody for NEDD8
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NEDD8
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      NEDD8 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 100 solr: 1.4