Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NDUFB2-AS1 Gene

Subcategory (RNA class) for NDUFB2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NDUFB2-AS1 Gene

  • NDUFB2 Antisense RNA 1 2 3 5
  • NDUFB2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NDUFB2-AS1 Gene

Previous GeneCards Identifiers for NDUFB2-AS1 Gene

  • GC07M140397

Summaries for NDUFB2-AS1 Gene

GeneCards Summary for NDUFB2-AS1 Gene

NDUFB2-AS1 (NDUFB2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NDUFB2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NDUFB2-AS1 Gene

Genomics for NDUFB2-AS1 Gene

Regulatory Elements for NDUFB2-AS1 Gene

Enhancers for NDUFB2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H140517 1.5 Ensembl ENCODE dbSUPER 10.4 +178.3 178262 2 HDGF PKNOX1 ATF1 ARNT ARID4B ZNF2 ZNF143 ATF7 DEK REST NDUFB2-AS1 NDUFB2 DENND2A MRPS33 MKRN1 ENSG00000201354
GH07H140637 1.2 ENCODE dbSUPER 10.8 +57.2 57238 5 HDGF GLI4 ZNF2 GLIS2 ZNF416 KLF7 ATF7 YY2 ZNF488 ZFP41 CCT4P1 RNU4-74P SLC37A3 NDUFB2 NDUFB2-AS1 BRAF PARP12 ADCK2 TMEM178B LOC105375535
GH07H140923 1.4 ENCODE dbSUPER 9 -227.5 -227547 2 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 YY1 ZNF766 CBX5 ZNF143 NDUFB2 MRPS33 NDUFB2-AS1 ADCK2 BRAF RNU6-85P
GH07H141013 1.2 ENCODE 10.3 -317.3 -317255 2 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 BRAF TMEM178B NDUFB2-AS1 NDUFB2 TAS2R5 TAS2R6P SLC37A3 MRPS33 CCT4P1
GH07H141012 1 Ensembl ENCODE 10.5 -315.3 -315314 0 CTCF PKNOX1 SAP130 TBL1XR1 ARID4B ZNF384 ZNF2 RAD21 CC2D1A SMC3 BRAF NDUFB2-AS1 NDUFB2 MRPS33 CCT4P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NDUFB2-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for NDUFB2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000219130 -23 1401 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 CBX5

Genomic Location for NDUFB2-AS1 Gene

Chromosome:
7
Start:
140,695,336 bp from pter
End:
140,697,077 bp from pter
Size:
1,742 bases
Orientation:
Minus strand

Genomic View for NDUFB2-AS1 Gene

Genes around NDUFB2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NDUFB2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NDUFB2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NDUFB2-AS1 Gene

Proteins for NDUFB2-AS1 Gene

Post-translational modifications for NDUFB2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NDUFB2-AS1 Gene

Domains & Families for NDUFB2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NDUFB2-AS1 Gene

Function for NDUFB2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NDUFB2-AS1 Gene

Localization for NDUFB2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NDUFB2-AS1 Gene

Pathways & Interactions for NDUFB2-AS1 Gene

SuperPathways for NDUFB2-AS1 Gene

No Data Available

Interacting Proteins for NDUFB2-AS1 Gene

Gene Ontology (GO) - Biological Process for NDUFB2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NDUFB2-AS1 Gene

Drugs & Compounds for NDUFB2-AS1 Gene

No Compound Related Data Available

Transcripts for NDUFB2-AS1 Gene

mRNA/cDNA for NDUFB2-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NDUFB2-AS1 Gene

NDUFB2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NDUFB2-AS1 Gene

No ASD Table

Relevant External Links for NDUFB2-AS1 Gene

GeneLoc Exon Structure for
NDUFB2-AS1
ECgene alternative splicing isoforms for
NDUFB2-AS1

Expression for NDUFB2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NDUFB2-AS1 Gene

SOURCE GeneReport for Unigene cluster for NDUFB2-AS1 Gene:

Hs.534141
genes like me logo Genes that share expression patterns with NDUFB2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NDUFB2-AS1 Gene

Orthologs for NDUFB2-AS1 Gene

Evolution for NDUFB2-AS1 Gene

ENSEMBL:
Gene Tree for NDUFB2-AS1 (if available)
TreeFam:
Gene Tree for NDUFB2-AS1 (if available)

No data available for Orthologs for NDUFB2-AS1 Gene

Paralogs for NDUFB2-AS1 Gene

No data available for Paralogs for NDUFB2-AS1 Gene

Variants for NDUFB2-AS1 Gene

Sequence variations from dbSNP and Humsavar for NDUFB2-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000636390 -- 140,696,975(+) CGCGT(A/G)TCTCC intron-variant, nc-transcript-variant
rs1001017675 -- 140,698,862(+) TTTTT(A/T)AAAAT intron-variant, upstream-variant-2KB
rs1001537819 -- 140,698,440(+) AAGAA(A/G)GACCT intron-variant, upstream-variant-2KB
rs1001611709 -- 140,698,130(+) GATGA(A/G)GAATC intron-variant, upstream-variant-2KB
rs1002753072 -- 140,695,468(+) TGGCC(C/T)CGGGT intron-variant, nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for NDUFB2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv831157 CNV gain 17160897
nsv831158 CNV loss 17160897

Relevant External Links for NDUFB2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NDUFB2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NDUFB2-AS1 Gene

Disorders for NDUFB2-AS1 Gene

Relevant External Links for NDUFB2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NDUFB2-AS1

No disorders were found for NDUFB2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NDUFB2-AS1 Gene

Publications for NDUFB2-AS1 Gene

No publications were found for NDUFB2-AS1 Gene.

Products for NDUFB2-AS1 Gene

Sources for NDUFB2-AS1 Gene

Content
Loading form....