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Aliases for NDUFAF8 Gene

Aliases for NDUFAF8 Gene

  • NADH:Ubiquinone Oxidoreductase Complex Assembly Factor 8 2 3 5
  • C17orf89 3 4
  • NADH Dehydrogenase [Ubiquinone] 1 Alpha Subcomplex Assembly Factor 8 3
  • Chromosome 17 Open Reading Frame 89 2

External Ids for NDUFAF8 Gene

Previous HGNC Symbols for NDUFAF8 Gene

  • C17orf89

Summaries for NDUFAF8 Gene

GeneCards Summary for NDUFAF8 Gene

NDUFAF8 (NADH:Ubiquinone Oxidoreductase Complex Assembly Factor 8) is a Protein Coding gene.

UniProtKB/Swiss-Prot for NDUFAF8 Gene

  • Involved in the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I, MT-ND1) (PubMed:27499296). Required to stabilize NDUFAF5 (PubMed:27499296).

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NDUFAF8 Gene

Genomics for NDUFAF8 Gene

Regulatory Elements for NDUFAF8 Gene

Enhancers for NDUFAF8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F081238 1.1 ENCODE 16.4 +0.2 171 2.6 ATF1 PKNOX1 ARID4B SIN3A ZNF48 ETS1 YY1 ZNF121 ELK1 ZNF143 NDUFAF8 NPLOC4 ALYREF SLC38A10 TEPSIN GC17M081235
GH17F081250 0.9 ENCODE 15.2 +12.9 12860 3.0 HDGF ATF1 PKNOX1 ARNT WRNIP1 ZNF133 ARID4B YBX1 ZNF2 ZNF121 ENSG00000229947 NDUFAF8 SLC38A10 ENSG00000276101 GC17M081250
GH17F081254 1.1 Ensembl ENCODE 15.1 +15.9 15931 1.9 CTCF PKNOX1 NFRKB ZNF76 ZNF223 KLF17 MAX ZIC2 RAD21 GLIS2 ENSG00000262049 TEPSIN NDUFAF8 SLC38A10 ARL16 HGS ALYREF RFNG ENSG00000265678 GC17M081250
GH17F081272 0.2 Ensembl 15.1 +33.9 33862 0.6 ZNF316 POLR2A SMARCA4 MAX MYC NDUFAF8 TMEM105 SLC38A10 GC17P081274 ENSG00000279187
GH17F081276 1 Ensembl ENCODE 14.1 +38.7 38718 2.0 REST ZIC2 E2F1 ZFHX2 GLIS2 GATA3 ZBTB33 EGR2 TCF7L2 NDUFAF8 TMEM105 LINC00482 SLC38A10 GC17P081274
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around NDUFAF8 on UCSC Golden Path with GeneCards custom track

Promoters for NDUFAF8 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001355189 161 2401 ATF1 PKNOX1 ARID4B SIN3A ZNF48 ETS1 YY1 ZNF121 ELK1 ZNF143

Genomic Location for NDUFAF8 Gene

Chromosome:
17
Start:
81,239,239 bp from pter
End:
81,241,298 bp from pter
Size:
2,060 bases
Orientation:
Plus strand

Genomic View for NDUFAF8 Gene

Genes around NDUFAF8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NDUFAF8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NDUFAF8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NDUFAF8 Gene

Proteins for NDUFAF8 Gene

  • Protein details for NDUFAF8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A1L188-NDUF8_HUMAN
    Recommended name:
    NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8
    Protein Accession:
    A1L188

    Protein attributes for NDUFAF8 Gene

    Size:
    74 amino acids
    Molecular mass:
    7756 Da
    Quaternary structure:
    • Interacts with NDUFAF5.

neXtProt entry for NDUFAF8 Gene

Post-translational modifications for NDUFAF8 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for NDUFAF8 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for NDUFAF8 Gene

Domains & Families for NDUFAF8 Gene

Protein Domains for NDUFAF8 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

A1L188

UniProtKB/Swiss-Prot:

NDUF8_HUMAN :
  • Contains 1 CHCH (coiled coil-helix-coiled coil-helix) domain.
Domain:
  • Contains 1 CHCH (coiled coil-helix-coiled coil-helix) domain.
genes like me logo Genes that share domains with NDUFAF8: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for NDUFAF8 Gene

Function for NDUFAF8 Gene

Molecular function for NDUFAF8 Gene

UniProtKB/Swiss-Prot Function:
Involved in the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I, MT-ND1) (PubMed:27499296). Required to stabilize NDUFAF5 (PubMed:27499296).

Gene Ontology (GO) - Molecular Function for NDUFAF8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 27499296
genes like me logo Genes that share ontologies with NDUFAF8: view

Phenotypes for NDUFAF8 Gene

GenomeRNAi human phenotypes for NDUFAF8:
genes like me logo Genes that share phenotypes with NDUFAF8: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NDUFAF8 Gene

Localization for NDUFAF8 Gene

Subcellular locations from UniProtKB/Swiss-Prot for NDUFAF8 Gene

Mitochondrion.

Gene Ontology (GO) - Cellular Components for NDUFAF8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IEA,IDA 27499296
genes like me logo Genes that share ontologies with NDUFAF8: view

No data available for Subcellular locations from COMPARTMENTS for NDUFAF8 Gene

Pathways & Interactions for NDUFAF8 Gene

SuperPathways for NDUFAF8 Gene

No Data Available

Interacting Proteins for NDUFAF8 Gene

Gene Ontology (GO) - Biological Process for NDUFAF8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0032981 mitochondrial respiratory chain complex I assembly IMP 27499296
genes like me logo Genes that share ontologies with NDUFAF8: view

No data available for Pathways by source and SIGNOR curated interactions for NDUFAF8 Gene

Transcripts for NDUFAF8 Gene

Unigene Clusters for NDUFAF8 Gene

Chromosome 17 open reading frame 89:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NDUFAF8 Gene

No ASD Table

Relevant External Links for NDUFAF8 Gene

GeneLoc Exon Structure for
NDUFAF8
ECgene alternative splicing isoforms for
NDUFAF8

Expression for NDUFAF8 Gene

NURSA nuclear receptor signaling pathways regulating expression of NDUFAF8 Gene:

NDUFAF8

SOURCE GeneReport for Unigene cluster for NDUFAF8 Gene:

Hs.356545
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NDUFAF8 Gene

Orthologs for NDUFAF8 Gene

This gene was present in the common ancestor of chordates.

Orthologs for NDUFAF8 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C17orf89 35
  • 99 (a)
OneToOne
C17H17orf89 34
  • 97.75 (n)
dog
(Canis familiaris)
Mammalia C9H17orf89 34
  • 88.58 (n)
C17orf89 35
  • 88 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC690871 34
  • 86.3 (n)
cow
(Bos Taurus)
Mammalia C19H17orf89 34
  • 85.84 (n)
mouse
(Mus musculus)
Mammalia 1810043H04Rik 34 35
  • 85.39 (n)
Ndufaf8 16
zebrafish
(Danio rerio)
Actinopterygii C12H17orf89 35
  • 51 (a)
OneToOne
Species where no ortholog for NDUFAF8 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NDUFAF8 Gene

ENSEMBL:
Gene Tree for NDUFAF8 (if available)
TreeFam:
Gene Tree for NDUFAF8 (if available)

Paralogs for NDUFAF8 Gene

Pseudogenes.org Pseudogenes for NDUFAF8 Gene

genes like me logo Genes that share paralogs with NDUFAF8: view

No data available for Paralogs for NDUFAF8 Gene

Variants for NDUFAF8 Gene

Sequence variations from dbSNP and Humsavar for NDUFAF8 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs112102381 -- 81,241,301(+) GTGTG(C/T)AGACT downstream-variant-500B
rs112133654 -- 81,237,363(+) CACTA(C/T)ACGGG intron-variant, upstream-variant-2KB
rs112417848 -- 81,241,219(+) GTGTC(C/T)GTAAA utr-variant-3-prime
rs113464487 -- 81,238,077(+) ACAGA(A/T)TAGAG intron-variant, upstream-variant-2KB, reference, stop-gained, utr-variant-5-prime
rs113490148 -- 81,241,094(+) CATAT(A/C/T)GAATG utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for NDUFAF8 Gene

Variant ID Type Subtype PubMed ID
dgv46n68 CNV loss 17160897
esv26223 CNV gain+loss 19812545
esv2758707 CNV gain 17122850
nsv1064123 CNV gain 25217958
nsv1160499 CNV deletion 26073780
nsv2161 CNV insertion 18451855
nsv428351 CNV gain 18775914
nsv457971 CNV loss 19166990
nsv470619 CNV loss 18288195
nsv509677 CNV insertion 20534489
nsv576172 CNV loss 21841781
nsv828128 CNV loss 20364138
nsv952389 CNV deletion 24416366

Relevant External Links for NDUFAF8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NDUFAF8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NDUFAF8 Gene

Disorders for NDUFAF8 Gene

Relevant External Links for NDUFAF8

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NDUFAF8
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NDUFAF8

No disorders were found for NDUFAF8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NDUFAF8 Gene

Publications for NDUFAF8 Gene

  1. Mitochondrial Protein Interaction Mapping Identifies Regulators of Respiratory Chain Function. (PMID: 27499296) Floyd B.J. … Pagliarini D.J. (Mol. Cell 2016) 2 3 4 64
  2. Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry. (PMID: 17287340) Molina H. … Pandey A. (Proc. Natl. Acad. Sci. U.S.A. 2007) 2 3 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for NDUFAF8 Gene

Sources for NDUFAF8 Gene

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