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Aliases for NDUFA5 Gene

Aliases for NDUFA5 Gene

  • NADH Dehydrogenase (Ubiquinone) 1 Alpha Subcomplex, 5 2 3
  • NADH-Ubiquinone Oxidoreductase 13 KDa-B Subunit 2 3 4
  • NADH Dehydrogenase (Ubiquinone) 1 Alpha Subcomplex, 5, 13kDa 2 3
  • Complex I 13kDa Subunit B 2 3
  • Complex I Subunit B13 3 4
  • Type I Dehydrogenase 2 3
  • Ubiquinone Reductase 2 3
  • CI-13KD-B 3 4
  • UQOR13 3 6
  • NADH Dehydrogenase (Ubiquinone) 1 Alpha Subcomplex, 5 (13kD, B13) 2
  • NADH Dehydrogenase [Ubiquinone] 1 Alpha Subcomplex Subunit 5 3
  • Complex I-13kD-B 4
  • CI-13kB 3
  • NUFM 3
  • B13 3

External Ids for NDUFA5 Gene

Previous GeneCards Identifiers for NDUFA5 Gene

  • GC07M121658
  • GC07M122721
  • GC07M122735
  • GC07M122775
  • GC07M122964
  • GC07M123177
  • GC07M117543

Summaries for NDUFA5 Gene

Entrez Gene Summary for NDUFA5 Gene

  • This nuclear gene encodes a conserved protein that comprises the B13 subunit of complex I of the mitochondrial respiratory chain. The encoded protein localizes to the inner mitochondrial membrane, where it is thought to aid in the transfer of electrons from NADH to ubiquinone. Alternative splicing results in multiple transcript variants. There are numerous pseudogenes of this gene on chromosomes 1, 3, 6, 8, 9, 11, 12, and 16. [provided by RefSeq, Apr 2014]

GeneCards Summary for NDUFA5 Gene

NDUFA5 (NADH Dehydrogenase (Ubiquinone) 1 Alpha Subcomplex, 5) is a Protein Coding gene. Among its related pathways are Metabolism and Metabolism. GO annotations related to this gene include NADH dehydrogenase (ubiquinone) activity.

UniProtKB/Swiss-Prot for NDUFA5 Gene

  • Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone

Gene Wiki entry for NDUFA5 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NDUFA5 Gene

Genomics for NDUFA5 Gene

Regulatory Elements for NDUFA5 Gene

Genomic Location for NDUFA5 Gene

Start:
123,536,997 bp from pter
End:
123,558,255 bp from pter
Size:
21,259 bases
Orientation:
Minus strand

Genomic View for NDUFA5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NDUFA5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NDUFA5 Gene

Proteins for NDUFA5 Gene

  • Protein details for NDUFA5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q16718-NDUA5_HUMAN
    Recommended name:
    NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5
    Protein Accession:
    Q16718
    Secondary Accessions:
    • B2RD98
    • Q5H9R2
    • Q6IRX7

    Protein attributes for NDUFA5 Gene

    Size:
    116 amino acids
    Molecular mass:
    13459 Da
    Quaternary structure:
    • Complex I is composed of 45 different subunits.

    Alternative splice isoforms for NDUFA5 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for NDUFA5 Gene

Proteomics data for NDUFA5 Gene at MOPED

Post-translational modifications for NDUFA5 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for NDUFA5 Gene

Domains for NDUFA5 Gene

Gene Families for NDUFA5 Gene

HGNC:
  • comI :Mitochondrial respiratory chain complex / Complex I

Protein Domains for NDUFA5 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for NDUFA5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q16718

UniProtKB/Swiss-Prot:

NDUA5_HUMAN :
  • Q16718
Family:
  • Belongs to the complex I NDUFA5 subunit family.
genes like me logo Genes that share domains with NDUFA5: view

Function for NDUFA5 Gene

Molecular function for NDUFA5 Gene

GENATLAS Biochemistry: NADH ubiquinone oxidoreductase (Q reductase),component alpha 5,hydrophobic fraction of the complex I multi-subunit enzyme of the oxidative phosphorylation (OXPHOS),13kDa,,homologous to bovine and rat subunit B13
UniProtKB/Swiss-Prot Function: Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone

Gene Ontology (GO) - Molecular Function for NDUFA5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008137 NADH dehydrogenase (ubiquinone) activity NAS 9878551
GO:0016651 oxidoreductase activity, acting on NAD(P)H --
genes like me logo Genes that share ontologies with NDUFA5: view

Animal Model Products

CRISPR Products

miRNA for NDUFA5 Gene

miRTarBase miRNAs that target NDUFA5

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for NDUFA5 Gene

Localization for NDUFA5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for NDUFA5 Gene

Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for NDUFA5 Gene COMPARTMENTS Subcellular localization image for NDUFA5 gene
Compartment Confidence
mitochondrion 5
cytosol 2
chloroplast 1
extracellular 1
nucleus 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for NDUFA5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion --
GO:0005743 mitochondrial inner membrane TAS --
GO:0005747 mitochondrial respiratory chain complex I NAS 9878551
GO:0045271 respiratory chain complex I --
genes like me logo Genes that share ontologies with NDUFA5: view

Pathways for NDUFA5 Gene

genes like me logo Genes that share pathways with NDUFA5: view

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Gene Ontology (GO) - Biological Process for NDUFA5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006120 mitochondrial electron transport, NADH to ubiquinone NAS 9878551
GO:0022904 respiratory electron transport chain TAS --
GO:0044237 cellular metabolic process TAS --
GO:0044281 small molecule metabolic process TAS --
genes like me logo Genes that share ontologies with NDUFA5: view

Compounds for NDUFA5 Gene

(8) HMDB Compounds for NDUFA5 Gene

Compound Synonyms Cas Number PubMed IDs
FAD
  • 1H-Purin-6-amine flavin dinucleotide
146-14-5
Iron
  • Armco iron
7439-89-6
NAD
  • 3-Carbamoyl-1-D-ribofuranosylpyridinium hydroxide 5'-ester with adenosine 5'-pyrophosphate
53-84-9
NADH
  • 1,4-Dihydronicotinamide adenine dinucleotide
58-68-4
QH2
  • CoQH2
56275-39-9

(1) Drugbank Compounds for NDUFA5 Gene

Compound Synonyms Cas Number Type Actions PubMed IDs
NADH
  • beta-DPNH
606-68-8 target

(8) Novoseek inferred chemical compound relationships for NDUFA5 Gene

Compound -log(P) Hits PubMed IDs
ubiquinone 82.6 6
rotenone 79.6 1
nadh 72.7 3
ferricyanide 68.6 1
quinone 65.2 2
genes like me logo Genes that share compounds with NDUFA5: view

Transcripts for NDUFA5 Gene

Unigene Clusters for NDUFA5 Gene

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NDUFA5

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NDUFA5 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8a · 8b · 8c · 8d
SP1: - - - - - -
SP2: - - - -
SP3: - - - - -
SP4: - - -
SP5:
SP6: - - -
SP7: - - - - - - -
SP8:
SP9:

Relevant External Links for NDUFA5 Gene

GeneLoc Exon Structure for
NDUFA5
ECgene alternative splicing isoforms for
NDUFA5

Expression for NDUFA5 Gene

mRNA expression in normal human tissues for NDUFA5 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for NDUFA5 Gene

SOURCE GeneReport for Unigene cluster for NDUFA5 Gene Hs.651219

mRNA Expression by UniProt/SwissProt for NDUFA5 Gene

Q16718-NDUA5_HUMAN
Tissue specificity: Expressed in all tissues examined with highest levels in heart, skeletal muscle and brain
genes like me logo Genes that share expressions with NDUFA5: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for NDUFA5 Gene

Orthologs for NDUFA5 Gene

This gene was present in the common ancestor of animals.

Orthologs for NDUFA5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NDUFA5 35
  • 100 (n)
  • 100 (a)
NDUFA5 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia NDUFA5 35
  • 87.93 (n)
  • 87.07 (a)
NDUFA5 36
  • 87 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 36
  • 91 (a)
OneToMany
-- 36
  • 87 (a)
OneToMany
NDUFA5 35
  • 90.8 (n)
  • 91.38 (a)
mouse
(Mus musculus)
Mammalia Ndufa5 35
  • 83.62 (n)
  • 82.76 (a)
Ndufa5 16
Ndufa5 36
  • 83 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia NDUFA5 36
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia NDUFA5 36
  • 86 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ndufa5 35
  • 83.33 (n)
  • 80.17 (a)
chicken
(Gallus gallus)
Aves NDUFA5 35
  • 73.56 (n)
  • 71.55 (a)
NDUFA5 36
  • 72 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia NDUFA5 36
  • 74 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ndufa5 35
  • 68.97 (n)
  • 71.55 (a)
Str.15481 35
zebrafish
(Danio rerio)
Actinopterygii ndufa5 35
  • 63.51 (n)
  • 68.1 (a)
ndufa5 36
  • 68 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP005621 35
  • 56.52 (n)
  • 53.91 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG6463 35
  • 53.62 (n)
  • 50.43 (a)
CG6463 36
  • 47 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea C33A12.1 36
  • 40 (a)
OneToOne
CELE_C33A12.1 35
  • 56.76 (n)
  • 54.05 (a)
C33A12.1 37
  • 54 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.2952 36
  • 44 (a)
OneToOne
Species with no ortholog for NDUFA5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for NDUFA5 Gene

ENSEMBL:
Gene Tree for NDUFA5 (if available)
TreeFam:
Gene Tree for NDUFA5 (if available)

Paralogs for NDUFA5 Gene

Selected SIMAP similar genes for NDUFA5 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with NDUFA5: view

No data available for Paralogs for NDUFA5 Gene

Variants for NDUFA5 Gene

Sequence variations from dbSNP and Humsavar for NDUFA5 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs6737 -- 123,541,218(-) CATAC(C/G)GATAG utr-variant-3-prime, nc-transcript-variant
rs11004 -- 123,541,356(-) TTTCC(C/T)TTTGT utr-variant-3-prime, nc-transcript-variant
rs805775 -- 123,571,544(+) TATTT(A/G)TAGAT intron-variant
rs805776 -- 123,572,507(+) atatt(C/T)tatgt intron-variant
rs805777 -- 123,572,785(+) AGTTT(C/T)ATACA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NDUFA5 Gene

Variant ID Type Subtype PubMed ID
nsv524192 CNV Gain 19592680
nsv889125 CNV Gain 21882294
nsv831116 CNV Gain+Loss 17160897
nsv508479 CNV Loss 20534489
esv270745 CNV Insertion 20981092

Relevant External Links for NDUFA5 Gene

HapMap Linkage Disequilibrium report
NDUFA5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NDUFA5 Gene

Disorders for NDUFA5 Gene

(3) University of Copenhagen DISEASES for NDUFA5 Gene

Relevant External Links for NDUFA5

Genetic Association Database (GAD)
NDUFA5
Human Genome Epidemiology (HuGE) Navigator
NDUFA5
genes like me logo Genes that share disorders with NDUFA5: view

No data available for UniProtKB/Swiss-Prot for NDUFA5 Gene

Publications for NDUFA5 Gene

  1. Cloning of the human NADH:ubiquinone oxidoreductase subunit B13: localization to chromosome 7q32 and identification of a pseudogene on 11p15. (PMID: 9021153) Russell M.W. … Brody L.C. (Mamm. Genome 1997) 2 3 4
  2. A human cDNA encoding the homologue of NADH:ubiquinone oxidoreductase subunit B13. (PMID: 9048877) Pata I. … Metspalu A. (Biochim. Biophys. Acta 1997) 3 4
  3. Intron based radiation hybrid mapping of 15 complex I genes of the human electron transport chain. (PMID: 9763677) Emahazion T. … Brookes A.J. (Cytogenet. Cell Genet. 1998) 2 3
  4. Identification of NADH dehydrogenase 1 alpha subcomplex 5 capable to transform murine fibroblasts and overexpressed in human cervical carcinoma cell lines. (PMID: 16329995) Shimada T. … Katamine S. (Biochem. Biophys. Res. Commun. 2006) 3 23
  5. The subunit composition of the human NADH dehydrogenase obtained by rapid one-step immunopurification. (PMID: 12611891) Murray J. … Capaldi R.A. (J. Biol. Chem. 2003) 3 4

Products for NDUFA5 Gene

  • antibodies-online proteins for NDUFA5
  • antibodies-online antibodies for NDUFA5
  • antibodies-online kits for NDUFA5

Sources for NDUFA5 Gene

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