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Aliases for NDOR1 Gene

Aliases for NDOR1 Gene

  • NADPH Dependent Diflavin Oxidoreductase 1 2 3 5
  • NADPH-Dependent FMN And FAD-Containing Oxidoreductase 3 4
  • NR1 3 4
  • NADPH Dependent FMN And FAD Containing Oxidoreductase 2
  • NADPH-Dependent Diflavin Oxidoreductase 1 3
  • Novel Reductase 1 4
  • EC 1.18.1.- 4
  • BA350O14.9 3

External Ids for NDOR1 Gene

Previous GeneCards Identifiers for NDOR1 Gene

  • GC09M9D0102
  • GC09P137375
  • GC09P139219
  • GC09P140100
  • GC09P109559

Summaries for NDOR1 Gene

Entrez Gene Summary for NDOR1 Gene

  • This gene encodes an NADPH-dependent diflavin reductase that contains both flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) binding domains. The encoded protein catalyzes the transfer of electrons from NADPH through FAD and FMN cofactors to potential redox partners. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2012]

GeneCards Summary for NDOR1 Gene

NDOR1 (NADPH Dependent Diflavin Oxidoreductase 1) is a Protein Coding gene. Among its related pathways are Cytosolic iron-sulfur cluster assembly and Metabolism. GO annotations related to this gene include oxidoreductase activity and flavin adenine dinucleotide binding.

UniProtKB/Swiss-Prot for NDOR1 Gene

  • Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins (By similarity). Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1.

Gene Wiki entry for NDOR1 Gene

Additional gene information for NDOR1 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NDOR1 Gene

Genomics for NDOR1 Gene

Regulatory Elements for NDOR1 Gene

Enhancers for NDOR1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H137233 1.8 FANTOM5 ENCODE dbSUPER 42.4 +32.6 32639 9 MLX FEZF1 DMAP1 YY1 ZNF416 ZNF143 SP3 NFYC ZC3H11A ZFP41 EHMT1 SDCCAG3 NDOR1 ANAPC2 LOC651337 INPP5E DPH7 MAN1B1 SEC16A IL9RP1
GH09H137292 1.7 FANTOM5 ENCODE dbSUPER 19.8 +94.7 94735 15 PKNOX1 FOXA2 ARNT ZFP64 SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF766 EHMT1 DPH7 INPP5E SDCCAG3 ANAPC2 EXD3 MAN1B1 NRARP NDOR1 SNAPC4
GH09H136942 1.4 ENCODE dbSUPER 21.7 -258.2 -258207 10 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B EHMT1 ANAPC2 SDCCAG3 DPH7 MAN1B1 SEC16A LCN12 LOC651337 NDOR1 SNHG7
GH09H137720 1.3 Ensembl ENCODE dbSUPER 18.6 +517.0 517000 5 HDGF KLF1 KLF17 GLI4 ZIC2 ZKSCAN1 HIC1 ZFHX2 GLIS2 EGR1 EHMT1 ANAPC2 DPH7 LOC651337 MAN1B1 NDOR1 SNHG7 EXD3 TRAF2 LOC101928932
GH09H137166 1.8 FANTOM5 Ensembl ENCODE dbSUPER 12.4 -34.5 -34523 10 HDGF SIN3A ZNF2 ZBTB7B GLIS2 ZNF143 KLF7 SP3 REST GLIS1 MAN1B1 TPRN DPH7 INPP5E IL9RP1 ARRDC1-AS1 EXD3 TMEM203 NDOR1 GRIN1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NDOR1 on UCSC Golden Path with GeneCards custom track

Promoters for NDOR1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000243159 -67 1201 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 SP3 CEBPZ SP5

Genomic Location for NDOR1 Gene

Chromosome:
9
Start:
137,205,667 bp from pter
End:
137,219,361 bp from pter
Size:
13,695 bases
Orientation:
Plus strand

Genomic View for NDOR1 Gene

Genes around NDOR1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NDOR1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NDOR1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NDOR1 Gene

Proteins for NDOR1 Gene

  • Protein details for NDOR1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UHB4-NDOR1_HUMAN
    Recommended name:
    NADPH-dependent diflavin oxidoreductase 1
    Protein Accession:
    Q9UHB4
    Secondary Accessions:
    • D3YTG6
    • D3YTH9
    • Q5VSG4
    • Q86US9
    • Q96BC6

    Protein attributes for NDOR1 Gene

    Size:
    597 amino acids
    Molecular mass:
    66763 Da
    Cofactor:
    Name=FAD; Xref=ChEBI:CHEBI:57692;
    Cofactor:
    Name=FMN; Xref=ChEBI:CHEBI:58210;
    Quaternary structure:
    • Interacts with CIAPIN1. Interacts with DCPS.
    Miscellaneous:
    • Overexpression enhanced cytotoxicity of menadione, and consequently induced cell death, coexpression with DCPS reduced this toxicity.

    Three dimensional structures from OCA and Proteopedia for NDOR1 Gene

    Alternative splice isoforms for NDOR1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for NDOR1 Gene

Post-translational modifications for NDOR1 Gene

  • Ubiquitination at posLast=207207
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for NDOR1 Gene

Domains & Families for NDOR1 Gene

Gene Families for NDOR1 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Suggested Antigen Peptide Sequences for NDOR1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9UHB4

UniProtKB/Swiss-Prot:

NDOR1_HUMAN :
  • Belongs to the NADPH-dependent diflavin oxidoreductase NDOR1 family.
Family:
  • Belongs to the NADPH-dependent diflavin oxidoreductase NDOR1 family.
  • In the N-terminal section; belongs to the flavodoxin family.
  • In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
genes like me logo Genes that share domains with NDOR1: view

Function for NDOR1 Gene

Molecular function for NDOR1 Gene

UniProtKB/Swiss-Prot BiophysicochemicalProperties:
Kinetic parameters: KM=21 uM for cytochrome c {ECO:0000269 PubMed:10625700}; Vmax=1.2 umol/min/ug enzyme for cytochrome c reduction {ECO:0000269 PubMed:10625700}; pH dependence: Optimum pH is about 8.0. {ECO:0000269 PubMed:10625700};
UniProtKB/Swiss-Prot Function:
Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins (By similarity). Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1.

Enzyme Numbers (IUBMB) for NDOR1 Gene

Phenotypes From GWAS Catalog for NDOR1 Gene

Gene Ontology (GO) - Molecular Function for NDOR1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003958 NADPH-hemoprotein reductase activity IEA --
GO:0005515 protein binding IPI 16140270
GO:0010181 FMN binding IDA 10625700
GO:0016491 oxidoreductase activity IDA 10625700
GO:0050660 flavin adenine dinucleotide binding IDA 10625700
genes like me logo Genes that share ontologies with NDOR1: view
genes like me logo Genes that share phenotypes with NDOR1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

No data available for Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for NDOR1 Gene

Localization for NDOR1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for NDOR1 Gene

Cytoplasm, perinuclear region. Note=Concentrated in perinuclear structure. {ECO:0000255 HAMAP-Rule:MF_03178, ECO:0000269 PubMed:12871939}.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for NDOR1 gene
Compartment Confidence
cytoskeleton 5
nucleus 5
cytosol 5
extracellular 1
endoplasmic reticulum 1
lysosome 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (3)
  • Intermediate filaments (3)
  • Nucleus (3)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for NDOR1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005737 cytoplasm IEA,IDA 10625700
GO:0005829 cytosol IDA 16140270
GO:0045111 intermediate filament cytoskeleton IDA --
GO:0048471 perinuclear region of cytoplasm IEA --
genes like me logo Genes that share ontologies with NDOR1: view

Pathways & Interactions for NDOR1 Gene

genes like me logo Genes that share pathways with NDOR1: view

Pathways by source for NDOR1 Gene

2 Reactome pathways for NDOR1 Gene

Gene Ontology (GO) - Biological Process for NDOR1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008219 cell death IDA 16140270
GO:0036245 cellular response to menadione IDA 16140270
GO:0055114 oxidation-reduction process IDA 10625700
genes like me logo Genes that share ontologies with NDOR1: view

No data available for SIGNOR curated interactions for NDOR1 Gene

Drugs & Compounds for NDOR1 Gene

(6) Drugs for NDOR1 Gene - From: HMDB and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
FAD Approved Pharma 0
Potassium Approved Pharma 0
Menadione Approved Nutra 248
Flavin Mononucleotide Experimental Pharma 7

(3) Additional Compounds for NDOR1 Gene - From: HMDB and Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
NADP
  • Adenine-nicotinamide dinucleotide phosphate
  • b-NADP
  • b-Nicotinamide adenine dinucleotide phosphate
  • b-TPN
  • beta-NADP
53-59-8
genes like me logo Genes that share compounds with NDOR1: view

Transcripts for NDOR1 Gene

Unigene Clusters for NDOR1 Gene

NADPH dependent diflavin oxidoreductase 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for NDOR1 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d ^ 7 ^ 8a · 8b ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13a · 13b · 13c · 13d ^
SP1: - - - -
SP2: - - - - -
SP3: - - - - - - -
SP4: - - - -
SP5:
SP6: -
SP7: -
SP8: -
SP9:

ExUns: 14a · 14b
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:

Relevant External Links for NDOR1 Gene

GeneLoc Exon Structure for
NDOR1
ECgene alternative splicing isoforms for
NDOR1

Expression for NDOR1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NDOR1 Gene

Protein differential expression in normal tissues from HIPED for NDOR1 Gene

This gene is overexpressed in CD4 Tcells (38.5), Placenta (11.5), and Testis (8.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for NDOR1 Gene



Protein tissue co-expression partners for NDOR1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of NDOR1 Gene:

NDOR1

SOURCE GeneReport for Unigene cluster for NDOR1 Gene:

Hs.512564

mRNA Expression by UniProt/SwissProt for NDOR1 Gene:

Q9UHB4-NDOR1_HUMAN
Tissue specificity: Low expression in brain, heart, kidney, pancreas, prostate and skeletal muscle. Highest levels in the placenta. Expressed in cancer cell lines including promyelocytic leukemia, HeLaS3, chronic myelagenous leukemia, lymphoblastic leukemia, Burkitts lymphoma, colorectal adenocarcinoma, lung carcinoma, and melanoma G-361.

Evidence on tissue expression from TISSUES for NDOR1 Gene

  • Nervous system(4.5)
  • Heart(4.1)
  • Skin(4.1)
genes like me logo Genes that share expression patterns with NDOR1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for NDOR1 Gene

Orthologs for NDOR1 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for NDOR1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NDOR1 33 34
  • 99.39 (n)
dog
(Canis familiaris)
Mammalia NDOR1 33 34
  • 84.42 (n)
cow
(Bos Taurus)
Mammalia NDOR1 33 34
  • 83.86 (n)
mouse
(Mus musculus)
Mammalia Ndor1 33 16 34
  • 80.29 (n)
rat
(Rattus norvegicus)
Mammalia Ndor1 33
  • 80.23 (n)
oppossum
(Monodelphis domestica)
Mammalia NDOR1 34
  • 75 (a)
OneToOne
chicken
(Gallus gallus)
Aves NDOR1 33 34
  • 70.08 (n)
lizard
(Anolis carolinensis)
Reptilia NDOR1 34
  • 67 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ndor1 33
  • 65.71 (n)
African clawed frog
(Xenopus laevis)
Amphibia Xl.28148 33
zebrafish
(Danio rerio)
Actinopterygii ndor1 33 34
  • 61.12 (n)
zgc66159 33
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP003889 33
  • 53.18 (n)
fruit fly
(Drosophila melanogaster)
Insecta CG13667 33 34
  • 50.69 (n)
worm
(Caenorhabditis elegans)
Secernentea fre-1 33 34
  • 47.38 (n)
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_ADL306C 33
  • 44.66 (n)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0B12155g 33
  • 43.14 (n)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes TAH18 33 34 36
  • 42 (n)
thale cress
(Arabidopsis thaliana)
eudicotyledons AT3G02280 33
  • 48.29 (n)
rice
(Oryza sativa)
Liliopsida Os01g0733600 33
  • 47 (n)
bread mold
(Neurospora crassa)
Ascomycetes NCU09727 33
  • 47.65 (n)
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 44 (a)
OneToOne
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes tah18 33
  • 43.05 (n)
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.13988 33
Species where no ortholog for NDOR1 was found in the sources mined by GeneCards:
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for NDOR1 Gene

ENSEMBL:
Gene Tree for NDOR1 (if available)
TreeFam:
Gene Tree for NDOR1 (if available)

Paralogs for NDOR1 Gene

(2) SIMAP similar genes for NDOR1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with NDOR1: view

No data available for Paralogs for NDOR1 Gene

Variants for NDOR1 Gene

Sequence variations from dbSNP and Humsavar for NDOR1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000011821 -- 137,212,730(+) TACTG(A/G)CTTCT intron-variant, utr-variant-5-prime
rs1000246543 -- 137,216,482(+) CACGA(A/G)GGAGC nc-transcript-variant, downstream-variant-500B, utr-variant-3-prime
rs1000316314 -- 137,205,948(+) GACGA(A/G)CAGGC intron-variant, upstream-variant-2KB
rs1000521730 -- 137,208,162(+) AAAAG(A/G)AAAAG intron-variant
rs1000574292 -- 137,218,334(+) TCACC(A/G)CAACC nc-transcript-variant, utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for NDOR1 Gene

Variant ID Type Subtype PubMed ID
dgv13009n54 CNV loss 21841781
dgv13010n54 CNV loss 21841781
esv2422220 CNV deletion 17116639
esv2739415 CNV deletion 23290073
esv2739416 CNV deletion 23290073
nsv1161918 CNV duplication 26073780
nsv524322 CNV loss 19592680
nsv616007 CNV loss 21841781
nsv616012 CNV loss 21841781
nsv951207 CNV deletion 24416366

Variation tolerance for NDOR1 Gene

Residual Variation Intolerance Score: 84.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 8.05; 84.32% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for NDOR1 Gene

Human Gene Mutation Database (HGMD)
NDOR1
SNPedia medical, phenotypic, and genealogical associations of SNPs for
NDOR1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NDOR1 Gene

Disorders for NDOR1 Gene

Relevant External Links for NDOR1

Human Genome Epidemiology (HuGE) Navigator
NDOR1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NDOR1

No disorders were found for NDOR1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NDOR1 Gene

Publications for NDOR1 Gene

  1. Identification of a functionally impaired allele of human novel oxidoreductase 1 (NDOR1), NDOR1*1. (PMID: 15900210) Finn RD … Paine MJ (Pharmacogenetics and genomics 2005) 3 4 22 60
  2. Role of a novel dual flavin reductase (NR1) and an associated histidine triad protein (DCS-1) in menadione-induced cytotoxicity. (PMID: 16140270) Kwaśnicka-Crawford DA … Vincent SR (Biochemical and biophysical research communications 2005) 3 4 22 60
  3. Determination of the redox potentials and electron transfer properties of the FAD- and FMN-binding domains of the human oxidoreductase NR1. (PMID: 12631275) Finn RD … Scrutton NS (European journal of biochemistry 2003) 2 3 22 60
  4. Coordinate expression of NADPH-dependent flavin reductase, Fre-1, and Hint-related 7meGMP-directed hydrolase, DCS-1. (PMID: 12871939) Kwasnicka DA … Vincent SR (The Journal of biological chemistry 2003) 3 4 22 60
  5. Cloning and characterization of a novel human dual flavin reductase. (PMID: 10625700) Paine MJ … Wolf CR (The Journal of biological chemistry 2000) 2 3 4 60

Products for NDOR1 Gene

Sources for NDOR1 Gene

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