Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NCOR1P1 Gene

Aliases for NCOR1P1 Gene

  • Nuclear Receptor Corepressor 1 Pseudogene 1 2 3 4 5
  • C20orf191 3 4
  • Nuclear Receptor Co-Repressor 1 Pseudogene 3
  • Chromosome 20 Open Reading Frame 191 2
  • BB329D4.2 3

External Ids for NCOR1P1 Gene

Previous HGNC Symbols for NCOR1P1 Gene

  • C20orf191

Summaries for NCOR1P1 Gene

GeneCards Summary for NCOR1P1 Gene

NCOR1P1 (Nuclear Receptor Corepressor 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCOR1P1 Gene

Genomics for NCOR1P1 Gene

Genomic Location for NCOR1P1 Gene

Chromosome:
20
Start:
26,103,416 bp from pter
End:
26,114,041 bp from pter
Size:
10,626 bases
Orientation:
Minus strand

Genomic View for NCOR1P1 Gene

Genes around NCOR1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NCOR1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NCOR1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCOR1P1 Gene

No data available for Regulatory Elements for NCOR1P1 Gene

Proteins for NCOR1P1 Gene

  • Protein details for NCOR1P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H4R4-CT191_HUMAN
    Recommended name:
    Putative nuclear receptor corepressor 1-like protein NCOR1P1
    Protein Accession:
    Q9H4R4
    Secondary Accessions:
    • A2RUA0

    Protein attributes for NCOR1P1 Gene

    Size:
    102 amino acids
    Molecular mass:
    11336 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NCOR1P1 Gene

Post-translational modifications for NCOR1P1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for NCOR1P1 Gene

Domains & Families for NCOR1P1 Gene

Protein Domains for NCOR1P1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for NCOR1P1 Gene

Graphical View of Domain Structure for InterPro Entry

Q9H4R4

UniProtKB/Swiss-Prot:

CT191_HUMAN :
  • Belongs to the N-CoR nuclear receptor corepressors family.
Family:
  • Belongs to the N-CoR nuclear receptor corepressors family.
genes like me logo Genes that share domains with NCOR1P1: view

No data available for Gene Families for NCOR1P1 Gene

Function for NCOR1P1 Gene

Phenotypes for NCOR1P1 Gene

GenomeRNAi human phenotypes for NCOR1P1:
genes like me logo Genes that share phenotypes with NCOR1P1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NCOR1P1 Gene

Localization for NCOR1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NCOR1P1 Gene

Pathways & Interactions for NCOR1P1 Gene

SuperPathways for NCOR1P1 Gene

No Data Available

Interacting Proteins for NCOR1P1 Gene

Gene Ontology (GO) - Biological Process for NCOR1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NCOR1P1 Gene

Drugs & Compounds for NCOR1P1 Gene

No Compound Related Data Available

Transcripts for NCOR1P1 Gene

mRNA/cDNA for NCOR1P1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NCOR1P1 Gene

Nuclear receptor corepressor 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NCOR1P1 Gene

No ASD Table

Relevant External Links for NCOR1P1 Gene

GeneLoc Exon Structure for
NCOR1P1
ECgene alternative splicing isoforms for
NCOR1P1

Expression for NCOR1P1 Gene

mRNA expression in normal human tissues for NCOR1P1 Gene

mRNA differential expression in normal tissues according to GTEx for NCOR1P1 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of NCOR1P1 Gene:

NCOR1P1

SOURCE GeneReport for Unigene cluster for NCOR1P1 Gene:

Hs.711274
genes like me logo Genes that share expression patterns with NCOR1P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NCOR1P1 Gene

Orthologs for NCOR1P1 Gene

Evolution for NCOR1P1 Gene

ENSEMBL:
Gene Tree for NCOR1P1 (if available)
TreeFam:
Gene Tree for NCOR1P1 (if available)

No data available for Orthologs for NCOR1P1 Gene

Paralogs for NCOR1P1 Gene

(2) SIMAP similar genes for NCOR1P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with NCOR1P1: view

No data available for Paralogs for NCOR1P1 Gene

Variants for NCOR1P1 Gene

Sequence variations from dbSNP and Humsavar for NCOR1P1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs4455232 -- 26,108,993(+) tgacc(A/T)caggc intron-variant
rs4815510 -- 26,114,634(+) atccc(A/C)gcact upstream-variant-2KB
rs2697502 -- 26,110,769(-) tcagc(A/C/G/T)tacct intron-variant
rs2697503 -- 26,110,667(-) ggtct(C/T)aatct intron-variant
rs2697514 -- 26,112,722(-) ccaaa(A/G)tcgtg intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NCOR1P1 Gene

Variant ID Type Subtype PubMed ID
dgv4292n100 CNV gain 25217958
dgv509n27 CNV gain 19166990
dgv7526n54 CNV gain 21841781
esv25843 CNV gain+loss 19812545
esv2676316 CNV deletion 23128226
esv2758790 CNV gain+loss 17122850
esv2763226 CNV gain 21179565
esv3336892 CNV insertion 20981092
esv3376686 CNV duplication 20981092
esv3445664 CNV duplication 20981092
esv3556974 CNV deletion 23714750
esv3567931 CNV loss 25503493
esv3645606 CNV loss 21293372
esv3645607 CNV gain 21293372
esv3645608 CNV loss 21293372
esv3893328 CNV gain 25118596
nsv1057983 CNV loss 25217958
nsv1062308 CNV gain 25217958
nsv1071686 CNV deletion 25765185
nsv1128829 CNV duplication 24896259
nsv1136516 CNV deletion 24896259
nsv1141383 CNV duplication 24896259
nsv1145936 CNV duplication 26484159
nsv1148408 CNV duplication 26484159
nsv1153208 CNV duplication 26484159
nsv470545 CNV gain 18288195
nsv512607 CNV loss 21212237
nsv522873 CNV gain 19592680
nsv585761 CNV gain 21841781
nsv7340 OTHER inversion 18451855
nsv821510 CNV duplication 20802225
nsv953014 CNV duplication 24416366
nsv953015 CNV duplication 24416366
nsv962569 CNV duplication 23825009

Relevant External Links for NCOR1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NCOR1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NCOR1P1 Gene

Disorders for NCOR1P1 Gene

Relevant External Links for NCOR1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NCOR1P1

No disorders were found for NCOR1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NCOR1P1 Gene

Publications for NCOR1P1 Gene

  1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3 4 65
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 65
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 65

Products for NCOR1P1 Gene

Sources for NCOR1P1 Gene

Content