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Aliases for NCOA3 Gene

Aliases for NCOA3 Gene

  • Nuclear Receptor Coactivator 3 2 3
  • Thyroid Hormone Receptor Activator Molecule 1 2 3 4
  • Receptor-Associated Coactivator 3 2 3 4
  • AIB1 3 4 6
  • Class E Basic Helix-Loop-Helix Protein 42 3 4
  • Steroid Receptor Coactivator Protein 3 3 4
  • Amplified In Breast Cancer 1 Protein 3 4
  • CBP-Interacting Protein 3 4
  • EC 2.3.1.48 4 63
  • BHLHe42 3 4
  • TNRC14 3 6
  • TRAM-1 3 4
  • AIB-1 3 4
  • SRC-3 3 4
  • ACTR 3 4
  • RAC3 3 4
  • PCIP 3 4
  • CAGH16 3
  • KAT13B 3
  • TNRC16 3
  • NCoA-3 4
  • CTG26 3
  • RAC-3 4
  • TRAM1 4
  • SRC3 3

External Ids for NCOA3 Gene

Previous GeneCards Identifiers for NCOA3 Gene

  • GC20P045859
  • GC20P046769
  • GC20P046816
  • GC20P045564
  • GC20P046130
  • GC20P042872

Summaries for NCOA3 Gene

Entrez Gene Summary for NCOA3 Gene

  • The protein encoded by this gene is a nuclear receptor coactivator that interacts with nuclear hormone receptors to enhance their transcriptional activator functions. The encoded protein has histone acetyltransferase activity and recruits p300/CBP-associated factor and CREB binding protein as part of a multisubunit coactivation complex. This protein is initially found in the cytoplasm but is translocated into the nucleus upon phosphorylation. Several transcript variants encoding different isoforms have been found for this gene. In addition, a polymorphic repeat region is found in the C-terminus of the encoded protein. [provided by RefSeq, Mar 2010]

GeneCards Summary for NCOA3 Gene

NCOA3 (Nuclear Receptor Coactivator 3) is a Protein Coding gene. Diseases associated with NCOA3 include breast cancer. Among its related pathways are MAPK signaling pathway and Ras signaling pathway. GO annotations related to this gene include chromatin binding and transcription coactivator activity. An important paralog of this gene is NCOA2.

UniProtKB/Swiss-Prot for NCOA3 Gene

  • Nuclear receptor coactivator that directly binds nuclear receptors and stimulates the transcriptional activities in a hormone-dependent fashion. Plays a central role in creating a multisubunit coactivator complex, which probably acts via remodeling of chromatin. Involved in the coactivation of different nuclear receptors, such as for steroids (GR and ER), retinoids (RARs and RXRs), thyroid hormone (TRs), vitamin D3 (VDR) and prostanoids (PPARs). Displays histone acetyltransferase activity. Also involved in the coactivation of the NF-kappa-B pathway via its interaction with the NFKB1 subunit

Gene Wiki entry for NCOA3 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCOA3 Gene

Genomics for NCOA3 Gene

Regulatory Elements for NCOA3 Gene

Transcription factor binding sites by QIAGEN in the NCOA3 gene promoter:

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for NCOA3 Gene

Start:
47,501,857 bp from pter
End:
47,656,877 bp from pter
Size:
155,021 bases
Orientation:
Plus strand

Genomic View for NCOA3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NCOA3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCOA3 Gene

Proteins for NCOA3 Gene

  • Protein details for NCOA3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9Y6Q9-NCOA3_HUMAN
    Recommended name:
    Nuclear receptor coactivator 3
    Protein Accession:
    Q9Y6Q9
    Secondary Accessions:
    • A4LAZ5
    • Q0VF45
    • Q5JYD9
    • Q5JYE0
    • Q9BR49
    • Q9UPC9
    • Q9UPG4
    • Q9UPG7

    Protein attributes for NCOA3 Gene

    Size:
    1424 amino acids
    Molecular mass:
    155293 Da
    Quaternary structure:
    • Interacts with CARM1 (By similarity). Present in a complex containing NCOA2, IKKA, IKKB, IKBKG and the histone acetyltransferase protein CREBBP. Interacts with CASP8AP2, NR3C1 and PCAF. Interacts with ATAD2 and this interaction is enhanced by estradiol. Found in a complex containing NCOA3, AR and MAK. Interacts with DDX5. Interacts with PSMB9. Interacts with NPAS2.
    Miscellaneous:
    • NCOA3 is frequently amplified or overexpressed in breast and ovarian cancers

    Three dimensional structures from OCA and Proteopedia for NCOA3 Gene

    Alternative splice isoforms for NCOA3 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for NCOA3 Gene

Proteomics data for NCOA3 Gene at MOPED

Post-translational modifications for NCOA3 Gene

  • Acetylated by CREBBP. Acetylation occurs in the RID domain, and disrupts the interaction with nuclear receptors and regulates its function.
  • Methylated by CARM1.
  • Phosphorylated by IKK complex. Regulated its function. Phosphorylation at Ser-601 by CK1 promotes coactivator function.
  • Ubiquitination at Lys316
  • Modification sites at PhosphoSitePlus

Other Protein References for NCOA3 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for NCOA3 (SRC-3)

Domains for NCOA3 Gene

Gene Families for NCOA3 Gene

HGNC:
  • bHLH :Basic helix-loop-helix proteins
  • KAT :Chromatin-modifying enzymes / K-acetyltransferases

Graphical View of Domain Structure for InterPro Entry

Q9Y6Q9

UniProtKB/Swiss-Prot:

NCOA3_HUMAN :
  • Q9Y6Q9
Domain:
  • Contains three Leu-Xaa-Xaa-Leu-Leu (LXXLL) motifs. Motifs 1 and 2 are essential for the association with nuclear receptors, and constitute the RID domain (Receptor-interacting domain)
  • Contains 1 bHLH (basic helix-loop-helix) domain.
  • Contains 1 PAS (PER-ARNT-SIM) domain.
Family:
  • Belongs to the SRC/p160 nuclear receptor coactivator family.
genes like me logo Genes that share domains with NCOA3: view

Function for NCOA3 Gene

Molecular function for NCOA3 Gene

GENATLAS Biochemistry: nuclear receptor coactivator 3,amplified gene in breast cancer and pancreatic cell lines,1,possessing an intrinsic histone acetyltransferase activity,interacting with CREBBP and PCAF,stimulating gene expression in a hormone dependent fashion,by facilitating the assembly of basal transcription factors into a stable preinitiation complex
UniProtKB/Swiss-Prot CatalyticActivity: Acetyl-CoA + [histone] = CoA + acetyl-[histone].
UniProtKB/Swiss-Prot EnzymeRegulation: Coactivator activity on nuclear receptors and NF-kappa-B pathways is enhanced by various hormones, and the TNF cytokine, respectively. TNF stimulation probably enhances phosphorylation, which in turn activates coactivator function. In contrast, acetylation by CREBBP apparently suppresses coactivation of target genes by disrupting its association with nuclear receptors. Binds to CSNK1D
UniProtKB/Swiss-Prot Function: Nuclear receptor coactivator that directly binds nuclear receptors and stimulates the transcriptional activities in a hormone-dependent fashion. Plays a central role in creating a multisubunit coactivator complex, which probably acts via remodeling of chromatin. Involved in the coactivation of different nuclear receptors, such as for steroids (GR and ER), retinoids (RARs and RXRs), thyroid hormone (TRs), vitamin D3 (VDR) and prostanoids (PPARs). Displays histone acetyltransferase activity. Also involved in the coactivation of the NF-kappa-B pathway via its interaction with the NFKB1 subunit

Enzyme Numbers (IUBMB) for NCOA3 Gene

Gene Ontology (GO) - Molecular Function for NCOA3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003682 chromatin binding IEA --
GO:0003713 transcription coactivator activity NAS 15572661
GO:0004402 histone acetyltransferase activity IDA 9267036
GO:0004871 signal transducer activity IEA --
GO:0005515 protein binding IPI 10866661
genes like me logo Genes that share ontologies with NCOA3: view
genes like me logo Genes that share phenotypes with NCOA3: view

Animal Models for NCOA3 Gene

MGI Knock Outs for NCOA3:

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NCOA3

In Situ Assay Products

Flow Cytometry Products

No data available for Transcription Factor Targeting and HOMER Transcription for NCOA3 Gene

Localization for NCOA3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for NCOA3 Gene

Cytoplasm. Nucleus. Note=Mainly cytoplasmic and weakly nuclear. Upon TNF activation and subsequent phosphorylation, it translocates from the cytoplasm to the nucleus.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for NCOA3 Gene COMPARTMENTS Subcellular localization image for NCOA3 gene
Compartment Confidence
nucleus 5
cytosol 3

Gene Ontology (GO) - Cellular Components for NCOA3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA 17223341
GO:0005654 nucleoplasm IDA --
GO:0005737 cytoplasm IDA --
GO:0070062 extracellular exosome IDA 18570454
genes like me logo Genes that share ontologies with NCOA3: view

Pathways for NCOA3 Gene

genes like me logo Genes that share pathways with NCOA3: view

PCR Array Products

Gene Ontology (GO) - Biological Process for NCOA3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated --
GO:0007165 signal transduction --
GO:0010628 positive regulation of gene expression IMP 17223341
GO:0016573 histone acetylation IEA --
genes like me logo Genes that share ontologies with NCOA3: view

Compounds for NCOA3 Gene

(3) HMDB Compounds for NCOA3 Gene

Compound Synonyms Cas Number PubMed IDs
Acetyl-CoA
  • S-Acetyl coenzyme A
72-89-9
Coenzyme A
  • Acetoacetyl coenzyme A sodium salt
85-61-0
Vitamin D3
  • (+)-Vitamin D3
67-97-0

(22) Novoseek inferred chemical compound relationships for NCOA3 Gene

Compound -log(P) Hits PubMed IDs
estrogen 78.8 95
steroid 78.1 98
4-hydroxytamoxifen 66.6 3
tamoxifen 64 46
progesterone 55.1 21
genes like me logo Genes that share compounds with NCOA3: view

Transcripts for NCOA3 Gene

Unigene Clusters for NCOA3 Gene

Nuclear receptor coactivator 3:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for NCOA3

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for NCOA3

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NCOA3 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11a · 11b ^ 12a · 12b ^ 13 ^ 14 ^ 15a · 15b ^ 16a · 16b ^ 17a · 17b ^ 18a · 18b ·
SP1:
SP2:
SP3: -
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:

ExUns: 18c ^ 19a · 19b ^ 20 ^ 21 ^ 22a · 22b ^ 23 ^ 24 ^ 25a · 25b ^ 26 ^ 27a · 27b
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8: -
SP9:
SP10: -
SP11:
SP12:
SP13:
SP14: -
SP15:

Relevant External Links for NCOA3 Gene

GeneLoc Exon Structure for
NCOA3
ECgene alternative splicing isoforms for
NCOA3

Expression for NCOA3 Gene

mRNA expression in normal human tissues for NCOA3 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for NCOA3 Gene

SOURCE GeneReport for Unigene cluster for NCOA3 Gene Hs.592142

mRNA Expression by UniProt/SwissProt for NCOA3 Gene

Q9Y6Q9-NCOA3_HUMAN
Tissue specificity: Widely expressed. High expression in heart, skeletal muscle, pancreas and placenta. Low expression in brain, and very low in lung, liver and kidney
genes like me logo Genes that share expressions with NCOA3: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for NCOA3 Gene

Orthologs for NCOA3 Gene

This gene was present in the common ancestor of chordates.

Orthologs for NCOA3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NCOA3 35
  • 99.53 (n)
  • 99.51 (a)
NCOA3 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia NCOA3 35
  • 88.98 (n)
  • 90.6 (a)
NCOA3 36
  • 90 (a)
OneToOne
dog
(Canis familiaris)
Mammalia NCOA3 36
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ncoa3 35
  • 83.85 (n)
  • 85.28 (a)
Ncoa3 16
Ncoa3 36
  • 84 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia NCOA3 36
  • 79 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia NCOA3 36
  • 77 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ncoa3 35
  • 83.37 (n)
  • 83.79 (a)
chicken
(Gallus gallus)
Aves NCOA3 35
  • 74.62 (n)
  • 77.35 (a)
NCOA3 36
  • 77 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia NCOA3 36
  • 74 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia LOC398021 35
tropical clawed frog
(Silurana tropicalis)
Amphibia ncoa3 35
  • 70.15 (n)
  • 73.5 (a)
zebrafish
(Danio rerio)
Actinopterygii ncoa3 35
  • 59.93 (n)
  • 58.52 (a)
ncoa3 36
  • 49 (a)
OneToOne
Species with no ortholog for NCOA3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NCOA3 Gene

ENSEMBL:
Gene Tree for NCOA3 (if available)
TreeFam:
Gene Tree for NCOA3 (if available)

Paralogs for NCOA3 Gene

Paralogs for NCOA3 Gene

Selected SIMAP similar genes for NCOA3 Gene using alignment to 4 proteins:

Pseudogenes.org Pseudogenes for NCOA3 Gene

genes like me logo Genes that share paralogs with NCOA3: view

Variants for NCOA3 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for NCOA3 Gene

Q9Y6Q9-NCOA3_HUMAN
The length of the poly-Gln region is polymorphic in the normal population

Sequence variations from dbSNP and Humsavar for NCOA3 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs11271 -- 47,653,019(+) TGGGA(A/C)AGATG missense, reference
rs12273 -- 47,655,658(+) AACCA(A/G)GTCAG utr-variant-3-prime
rs14189 -- 47,655,650(+) AGAGG(A/T)AGAAC utr-variant-3-prime
rs365602 -- 47,641,880(+) GTTTT(C/T)GTGAG intron-variant
rs366442 -- 47,641,910(+) TCCCT(A/T)CCCTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NCOA3 Gene

Variant ID Type Subtype PubMed ID
esv33497 CNV Loss 17666407
nsv912907 CNV Gain 21882294
nsv912908 CNV Gain 21882294
nsv833995 CNV Loss 17160897
nsv509772 CNV Insertion 20534489
nsv527945 CNV Loss 19592680
dgv100n6 CNV Loss 16902084
dgv1333e1 CNV Complex 17122850

Relevant External Links for NCOA3 Gene

HapMap Linkage Disequilibrium report
NCOA3
Human Gene Mutation Database (HGMD)
NCOA3

PCR Panel Products

Disorders for NCOA3 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for NCOA3 Gene including...

Search for NCOA3 Gene in MalaCards »

(28) Novoseek inferred disease relationships for NCOA3 Gene

Disease -log(P) Hits PubMed IDs
breast cancer 75.9 181
ovarian cancer 46.2 19
tumors 44.9 69
mammary tumor 39.1 6
cancer 36.5 27

Relevant External Links for NCOA3

Genetic Association Database (GAD)
NCOA3
Human Genome Epidemiology (HuGE) Navigator
NCOA3
genes like me logo Genes that share disorders with NCOA3: view

No data available for UniProtKB/Swiss-Prot for NCOA3 Gene

Publications for NCOA3 Gene

  1. AIB1, a steroid receptor coactivator amplified in breast and ovarian cancer. (PMID: 9252329) Anzick S.L. … Meltzer P.S. (Science 1997) 2 3 4 23
  2. Polymorphic exonic CAG microsatellites in the gene amplified in breast cancer (AIB1 gene). (PMID: 9727751) Shirazi S.K. … Coetzee G.A. (Clin. Genet. 1998) 3 4 23
  3. Polymorphic repeat in AIB1 does not alter breast cancer risk. (PMID: 11056690) Haiman C.A. … Hunter D.J. (Breast Cancer Res. 2000) 3 23 48
  4. Alleles of the estrogen receptor alpha-gene and an estrogen receptor cotranscriptional activator gene, amplified in breast cancer-1 (AIB1), are associated with quantitative calcaneal ultrasound. (PMID: 11092404) Patel M.S. … Rubin L.A. (J. Bone Miner. Res. 2000) 3 23 48
  5. Correlates of obesity in postmenopausal women with breast cancer: comparison of genetic, demographic, disease-related, life history and dietary factors. (PMID: 14557830) Wasserman L. … Pierce J.P. (Int. J. Obes. Relat. Metab. Disord. 2004) 3 23 48

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