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Aliases for NCMAP Gene

Aliases for NCMAP Gene

  • Noncompact Myelin Associated Protein 2 3
  • Myelin Protein Of 11 KDa 2 3 4
  • C1orf130 3 4
  • MP11 3 4
  • Noncompact Myelin-Associated Protein 3
  • Chromosome 1 Open Reading Frame 130 2

External Ids for NCMAP Gene

Previous Symbols for NCMAP Gene

  • C1orf130

Summaries for NCMAP Gene

GeneCards Summary for NCMAP Gene

NCMAP (Noncompact Myelin Associated Protein) is a Protein Coding gene. GO annotations related to this gene include structural constituent of myelin sheath.

UniProtKB/Swiss-Prot for NCMAP Gene

  • Plays a role in myelin formation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCMAP Gene

Genomics for NCMAP Gene

Genomic Location for NCMAP Gene

Start:
24,556,076 bp from pter
End:
24,609,328 bp from pter
Size:
53,253 bases
Orientation:
Plus strand

Genomic View for NCMAP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NCMAP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCMAP Gene

No data available for Regulatory Elements for NCMAP Gene

Proteins for NCMAP Gene

  • Protein details for NCMAP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T1S8-NCMAP_HUMAN
    Recommended name:
    Noncompact myelin-associated protein
    Protein Accession:
    Q5T1S8
    Secondary Accessions:
    • A0PK04
    • B2RV34

    Protein attributes for NCMAP Gene

    Size:
    102 amino acids
    Molecular mass:
    11082 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NCMAP Gene

Proteomics data for NCMAP Gene at MOPED

Post-translational modifications for NCMAP Gene

Other Protein References for NCMAP Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for NCMAP Gene

Domains for NCMAP Gene

Protein Domains for NCMAP Gene

ProtoNet:
genes like me logo Genes that share domains with NCMAP: view

No data available for Gene Families and UniProtKB/Swiss-Prot for NCMAP Gene

Function for NCMAP Gene

Molecular function for NCMAP Gene

UniProtKB/Swiss-Prot Function: Plays a role in myelin formation.

Gene Ontology (GO) - Molecular Function for NCMAP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0019911 structural constituent of myelin sheath ISS --
genes like me logo Genes that share ontologies with NCMAP: view

Phenotypes for NCMAP Gene

genes like me logo Genes that share phenotypes with NCMAP: view

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NCMAP Gene

Localization for NCMAP Gene

Subcellular locations from UniProtKB/Swiss-Prot for NCMAP Gene

Cell membrane; Single-pass type I membrane protein. Note=Localized mainly in the Schmidt-Lanterman incisures and paranodes of noncompact peripheral nerve myelin. {ECO:0000250}.

Gene Ontology (GO) - Cellular Components for NCMAP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005887 integral component of plasma membrane ISS --
GO:0033270 paranode region of axon ISS --
GO:0043220 Schmidt-Lanterman incisure ISS --
genes like me logo Genes that share ontologies with NCMAP: view

Pathways for NCMAP Gene

SuperPathways for NCMAP Gene

No Data Available

Interacting Proteins for NCMAP Gene

Gene Ontology (GO) - Biological Process for NCMAP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0031643 positive regulation of myelination ISS --
GO:0032290 peripheral nervous system myelin formation ISS --
genes like me logo Genes that share ontologies with NCMAP: view

No data available for Pathways by source for NCMAP Gene

Transcripts for NCMAP Gene

mRNA/cDNA for NCMAP Gene

(3) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(20) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NCMAP Gene

Noncompact myelin associated protein:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NCMAP Gene

ExUns: 1 ^ 2a · 2b ^ 3a · 3b · 3c
SP1: -
SP2: -
SP3:

Relevant External Links for NCMAP Gene

GeneLoc Exon Structure for
NCMAP
ECgene alternative splicing isoforms for
NCMAP

Expression for NCMAP Gene

mRNA expression in normal human tissues for NCMAP Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for NCMAP Gene

This gene is overexpressed in Nerve - Tibial (31.1) and Pancreas (4.1).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for NCMAP Gene

SOURCE GeneReport for Unigene cluster for NCMAP Gene Hs.200253

genes like me logo Genes that share expressions with NCMAP: view

Orthologs for NCMAP Gene

This gene was present in the common ancestor of mammals.

Orthologs for NCMAP Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NCMAP 36
  • 99.35 (n)
  • 99.02 (a)
NCMAP 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia NCMAP 36
  • 88.24 (n)
  • 86.27 (a)
NCMAP 37
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia NCMAP 36
  • 89.77 (n)
  • 89.11 (a)
NCMAP 37
  • 78 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ncmap 36
  • 84.67 (n)
  • 80 (a)
Ncmap 16
Ncmap 37
  • 67 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia NCMAP 37
  • 63 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia NCMAP 37
  • 57 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ncmap 36
  • 84 (n)
  • 79 (a)
Species with no ortholog for NCMAP:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for NCMAP Gene

ENSEMBL:
Gene Tree for NCMAP (if available)
TreeFam:
Gene Tree for NCMAP (if available)

Paralogs for NCMAP Gene

No data available for Paralogs for NCMAP Gene

Variants for NCMAP Gene

Sequence variations from dbSNP and Humsavar for NCMAP Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1110257 -- 24,580,227(+) cggag(A/G)cacta intron-variant
rs1556365 -- 24,562,482(+) TGCCC(C/G)GTTCC intron-variant
rs1929301 -- 24,568,506(+) TGGAG(A/G)AGGGG intron-variant
rs1929302 -- 24,568,560(+) GCCAG(A/G)GACTT intron-variant
rs1929303 -- 24,568,580(+) TATTA(G/T)TAGTA intron-variant

Relevant External Links for NCMAP Gene

HapMap Linkage Disequilibrium report
NCMAP

No data available for Structural Variations from Database of Genomic Variants (DGV) for NCMAP Gene

Disorders for NCMAP Gene

No disorders were found for NCMAP Gene.

No data available for UniProtKB/Swiss-Prot for NCMAP Gene

Publications for NCMAP Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  3. Analysis of peripheral nerve expression profiles identifies a novel myelin glycoprotein, MP11. (PMID: 18650334) Ryu E.J. … Milbrandt J. (J. Neurosci. 2008) 2 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for NCMAP Gene

Sources for NCMAP Gene

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