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Aliases for NCLP1 Gene

Aliases for NCLP1 Gene

  • Nucleolin Pseudogene 1 2 3 5

External Ids for NCLP1 Gene

Previous GeneCards Identifiers for NCLP1 Gene

  • GC00U923199
  • GC09M139592
  • GC09M109166
  • GC09M139707

Summaries for NCLP1 Gene

GeneCards Summary for NCLP1 Gene

NCLP1 (Nucleolin Pseudogene 1) is a Pseudogene.

Additional gene information for NCLP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCLP1 Gene

Genomics for NCLP1 Gene

Regulatory Elements for NCLP1 Gene

Enhancers for NCLP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H136653 1.9 FANTOM5 Ensembl ENCODE dbSUPER 5.3 +155.8 155762 11.8 HDGF ATF1 ARNT TCF12 ZNF766 GLIS2 GATA2 ELK1 ATF7 NCOA1 EGFL7 AGPAT2 EHMT1 INPP5E ANAPC2 DPH7 SNAPC4 MAN1B1 EXD3 FAM69B
GH09H136671 1.1 ENCODE dbSUPER 5.1 +143.5 143516 1.3 HNRNPUL1 CTCF PTBP1 RB1 ZIC2 ZNF2 RAD21 CCNT2 HIC1 ZFHX2 SNHG7 SEC16A DPH7 EHMT1 ANAPC2 FAM69B AGPAT2 EXD3 MAN1B1 QSOX2
GH09H136822 0.4 ENCODE 0.4 -6.1 -6058 0 RING1 DPH7 INPP5E ARRDC1-AS1 EXD3 CCDC183 C9orf172 MAMDC4 PHPT1 SNAPC4 LCN12
GH09H136821 0.2 ENCODE 0.4 -6.2 -6218 0.2 CCDC183 C9orf172 MAMDC4 PHPT1 LCN12 C8G FBXW5 MIR4292 NCLP1
GH09H136823 0.2 ENCODE 0.4 -6.4 -6448 0.2 CCDC183 C9orf172 MAMDC4 PHPT1 LCN12 C8G FBXW5 NCLP1 MIR4292
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NCLP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NCLP1 Gene

Genomic Locations for NCLP1 Gene
chr9:136,812,788-136,815,536
(GRCh38/hg38)
Size:
2,749 bases
Orientation:
Minus strand
chr9:139,707,240-139,709,988
(GRCh37/hg19)

Genomic View for NCLP1 Gene

Genes around NCLP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NCLP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NCLP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCLP1 Gene

Proteins for NCLP1 Gene

Post-translational modifications for NCLP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NCLP1 Gene

Domains & Families for NCLP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NCLP1 Gene

Function for NCLP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NCLP1 Gene

Localization for NCLP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NCLP1 Gene

Pathways & Interactions for NCLP1 Gene

SuperPathways for NCLP1 Gene

No Data Available

Interacting Proteins for NCLP1 Gene

Gene Ontology (GO) - Biological Process for NCLP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NCLP1 Gene

Drugs & Compounds for NCLP1 Gene

No Compound Related Data Available

Transcripts for NCLP1 Gene

mRNA/cDNA for NCLP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NCLP1 Gene

No ASD Table

Relevant External Links for NCLP1 Gene

GeneLoc Exon Structure for
NCLP1
ECgene alternative splicing isoforms for
NCLP1

Expression for NCLP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NCLP1 Gene

mRNA differential expression in normal tissues according to GTEx for NCLP1 Gene

This gene is overexpressed in Brain - Cerebellum (x8.3) and Brain - Cerebellar Hemisphere (x5.8).

NURSA nuclear receptor signaling pathways regulating expression of NCLP1 Gene:

NCLP1
genes like me logo Genes that share expression patterns with NCLP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NCLP1 Gene

Orthologs for NCLP1 Gene

Evolution for NCLP1 Gene

ENSEMBL:
Gene Tree for NCLP1 (if available)
TreeFam:
Gene Tree for NCLP1 (if available)

No data available for Orthologs for NCLP1 Gene

Paralogs for NCLP1 Gene

No data available for Paralogs for NCLP1 Gene

Variants for NCLP1 Gene

Relevant External Links for NCLP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NCLP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NCLP1 Gene

Disorders for NCLP1 Gene

No disorders were found for NCLP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NCLP1 Gene

Publications for NCLP1 Gene

No publications were found for NCLP1 Gene.

Products for NCLP1 Gene

Sources for NCLP1 Gene

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