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Aliases for NCLP1 Gene

Aliases for NCLP1 Gene

  • Nucleolin Pseudogene 1 2 3 5

External Ids for NCLP1 Gene

Previous GeneCards Identifiers for NCLP1 Gene

  • GC00U923199
  • GC09M139592
  • GC09M109166
  • GC09M139707

Summaries for NCLP1 Gene

GeneCards Summary for NCLP1 Gene

NCLP1 (Nucleolin Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCLP1 Gene

Genomics for NCLP1 Gene

Regulatory Elements for NCLP1 Gene

Enhancers for NCLP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G136653 1.9 FANTOM5 Ensembl ENCODE dbSUPER 5.3 +155.8 155762 11.8 HDGF ATF1 CREB3L1 ARNT AGO1 SIN3A TCF12 ZNF766 GLIS2 ELK1 EGFL7 AGPAT2 FAM69B DNLZ NCLP1 FUT7 INPP5E HSPC324
GH09G136671 1.1 ENCODE dbSUPER 5.1 +143.5 143516 1.3 HNRNPUL1 PTBP1 RB1 AGO1 ZNF2 RAD21 GLIS2 EGR1 ZNF143 EGR2 FAM69B SNHG7 AGPAT2 SEC16A NCLP1 MIR126
GH09G136821 0.5 ENCODE 0.4 -6.2 -6218 0.2 SUZ12 RBBP5 KDM6A RBFOX2 CCDC183 C9orf172 MAMDC4 PHPT1 LCN12 FBXW5 C8G NCLP1 MIR4292
GH09G136822 0.5 ENCODE 0.4 -6.1 -6058 0.0 RING1 SUZ12 RBBP5 RBFOX2 DPH7 ARRDC1-AS1 CCDC183 C9orf172 MAMDC4 PHPT1 SNAPC4 LCN12 C8G FBXW5
GH09G136823 0.5 ENCODE 0.4 -6.4 -6448 0.2 SUZ12 RBBP5 KDM6A RBFOX2 CCDC183 C9orf172 MAMDC4 PHPT1 LCN12 C8G FBXW5 MIR4292 NCLP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NCLP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NCLP1 Gene

Chromosome:
9
Start:
136,812,788 bp from pter
End:
136,815,536 bp from pter
Size:
2,749 bases
Orientation:
Minus strand

Genomic View for NCLP1 Gene

Genes around NCLP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NCLP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NCLP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCLP1 Gene

Proteins for NCLP1 Gene

Post-translational modifications for NCLP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NCLP1 Gene

Domains & Families for NCLP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NCLP1 Gene

Function for NCLP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NCLP1 Gene

Localization for NCLP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NCLP1 Gene

Pathways & Interactions for NCLP1 Gene

SuperPathways for NCLP1 Gene

No Data Available

Interacting Proteins for NCLP1 Gene

Gene Ontology (GO) - Biological Process for NCLP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NCLP1 Gene

Drugs & Compounds for NCLP1 Gene

No Compound Related Data Available

Transcripts for NCLP1 Gene

mRNA/cDNA for NCLP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NCLP1 Gene

No ASD Table

Relevant External Links for NCLP1 Gene

GeneLoc Exon Structure for
NCLP1
ECgene alternative splicing isoforms for
NCLP1

Expression for NCLP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NCLP1 Gene

mRNA differential expression in normal tissues according to GTEx for NCLP1 Gene

This gene is overexpressed in Brain - Cerebellum (x8.3) and Brain - Cerebellar Hemisphere (x5.8).

NURSA nuclear receptor signaling pathways regulating expression of NCLP1 Gene:

NCLP1
genes like me logo Genes that share expression patterns with NCLP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NCLP1 Gene

Orthologs for NCLP1 Gene

Evolution for NCLP1 Gene

ENSEMBL:
Gene Tree for NCLP1 (if available)
TreeFam:
Gene Tree for NCLP1 (if available)

No data available for Orthologs for NCLP1 Gene

Paralogs for NCLP1 Gene

No data available for Paralogs for NCLP1 Gene

Variants for NCLP1 Gene

Relevant External Links for NCLP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NCLP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NCLP1 Gene

Disorders for NCLP1 Gene

No disorders were found for NCLP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NCLP1 Gene

Publications for NCLP1 Gene

No publications were found for NCLP1 Gene.

Products for NCLP1 Gene

Sources for NCLP1 Gene

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