Free for academic non-profit institutions. Other users need a Commercial license

Aliases for NCKAP5L Gene

Aliases for NCKAP5L Gene

  • NCK-Associated Protein 5-Like 2 3
  • KIAA1602 2 3 4 6
  • NCKAP5-Like 3 4
  • FP1193 3

External Ids for NCKAP5L Gene

Previous Symbols for NCKAP5L Gene

  • KIAA1602

Summaries for NCKAP5L Gene

GeneCards Summary for NCKAP5L Gene

NCKAP5L (NCK-Associated Protein 5-Like) is a Protein Coding gene. An important paralog of this gene is NCKAP5.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCKAP5L Gene

Genomics for NCKAP5L Gene

Genomic Location for NCKAP5L Gene

Start:
49,791,146 bp from pter
End:
49,828,750 bp from pter
Size:
37,605 bases
Orientation:
Minus strand

Genomic View for NCKAP5L Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NCKAP5L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCKAP5L Gene

No data available for Regulatory Elements for NCKAP5L Gene

Proteins for NCKAP5L Gene

  • Protein details for NCKAP5L Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9HCH0-NCK5L_HUMAN
    Recommended name:
    Nck-associated protein 5-like
    Protein Accession:
    Q9HCH0
    Secondary Accessions:
    • Q2TB26
    • Q71RH1
    • Q8N4W1
    • Q96HX2

    Protein attributes for NCKAP5L Gene

    Size:
    1330 amino acids
    Molecular mass:
    139013 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAQ15202.1; Type=Frameshift; Positions=Several; Evidence={ECO:0000305};

    Alternative splice isoforms for NCKAP5L Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for NCKAP5L Gene

Proteomics data for NCKAP5L Gene at MOPED

Post-translational modifications for NCKAP5L Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for NCKAP5L Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for NCKAP5L Gene

Domains for NCKAP5L Gene

Protein Domains for NCKAP5L Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with NCKAP5L: view

No data available for Gene Families and UniProtKB/Swiss-Prot for NCKAP5L Gene

Function for NCKAP5L Gene

Phenotypes for NCKAP5L Gene

genes like me logo Genes that share phenotypes with NCKAP5L: view

miRNA for NCKAP5L Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for NCKAP5L Gene

Localization for NCKAP5L Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for NCKAP5L Gene COMPARTMENTS Subcellular localization image for NCKAP5L gene
Compartment Confidence
nucleus 3
cytosol 2
golgi apparatus 1

No data available for Gene Ontology (GO) - Cellular Components for NCKAP5L Gene

Pathways for NCKAP5L Gene

SuperPathways for NCKAP5L Gene

No Data Available

Interacting Proteins for NCKAP5L Gene

Gene Ontology (GO) - Biological Process for NCKAP5L Gene

None

No data available for Pathways by source for NCKAP5L Gene

Transcripts for NCKAP5L Gene

Unigene Clusters for NCKAP5L Gene

NCK-associated protein 5-like:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NCKAP5L Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6
SP1:
SP2:

Relevant External Links for NCKAP5L Gene

GeneLoc Exon Structure for
NCKAP5L
ECgene alternative splicing isoforms for
NCKAP5L

Expression for NCKAP5L Gene

mRNA expression in normal human tissues for NCKAP5L Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for NCKAP5L Gene

SOURCE GeneReport for Unigene cluster for NCKAP5L Gene Hs.143067

genes like me logo Genes that share expressions with NCKAP5L: view

Orthologs for NCKAP5L Gene

This gene was present in the common ancestor of chordates.

Orthologs for NCKAP5L Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NCKAP5L 36
  • 99.15 (n)
  • 99.02 (a)
NCKAP5L 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia NCKAP5L 36
  • 89.34 (n)
  • 90.02 (a)
NCKAP5L 37
  • 90 (a)
OneToOne
dog
(Canis familiaris)
Mammalia NCKAP5L 36
  • 88.64 (n)
  • 90.73 (a)
NCKAP5L 37
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Nckap5l 36
  • 85.13 (n)
  • 87.76 (a)
Nckap5l 16
Nckap5l 37
  • 87 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia NCKAP5L 37
  • 59 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Nckap5l 36
  • 84.13 (n)
  • 86.24 (a)
lizard
(Anolis carolinensis)
Reptilia NCKAP5L 37
  • 46 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.20266 36
tropical clawed frog
(Silurana tropicalis)
Amphibia nckap5l 36
  • 55.2 (n)
  • 50.88 (a)
zebrafish
(Danio rerio)
Actinopterygii NCKAP5L 37
  • 25 (a)
OneToOne
Species with no ortholog for NCKAP5L:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NCKAP5L Gene

ENSEMBL:
Gene Tree for NCKAP5L (if available)
TreeFam:
Gene Tree for NCKAP5L (if available)

Paralogs for NCKAP5L Gene

Paralogs for NCKAP5L Gene

genes like me logo Genes that share paralogs with NCKAP5L: view

Variants for NCKAP5L Gene

Sequence variations from dbSNP and Humsavar for NCKAP5L Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs729281 -- 49,802,611(-) ACTTT(A/G)ACTCC intron-variant
rs751675 -- 49,808,637(+) TTCTG(C/T)CTGCC intron-variant
rs897054 -- 49,819,471(-) TATGT(A/G)TATAT intron-variant
rs897055 -- 49,798,328(-) TTGTG(A/G)TCAGT intron-variant
rs897059 -- 49,808,928(+) CCGCC(A/G)GAATT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NCKAP5L Gene

Variant ID Type Subtype PubMed ID
nsv522972 CNV Gain 19592680

Relevant External Links for NCKAP5L Gene

HapMap Linkage Disequilibrium report
NCKAP5L

Disorders for NCKAP5L Gene

No disorders were found for NCKAP5L Gene.

No data available for UniProtKB/Swiss-Prot for NCKAP5L Gene

Publications for NCKAP5L Gene

  1. Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10997877) Nagase T. … Ohara O. (DNA Res. 2000) 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  5. A human MAP kinase interactome. (PMID: 20936779) Bandyopadhyay S. … Ideker T. (Nat. Methods 2010) 3

Products for NCKAP5L Gene

Sources for NCKAP5L Gene

Back to Top

Content