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Aliases for NCK1-AS1 Gene

Subcategory (RNA class) for NCK1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NCK1-AS1 Gene

  • NCK1 Antisense RNA 1 (Head To Head) 2 3 5
  • SLC35G2 Antisense RNA 1 2 3
  • SLC35G2-AS1 3

External Ids for NCK1-AS1 Gene

Previous GeneCards Identifiers for NCK1-AS1 Gene

  • GC03M136562

Summaries for NCK1-AS1 Gene

GeneCards Summary for NCK1-AS1 Gene

NCK1-AS1 (NCK1 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCK1-AS1 Gene

Genomics for NCK1-AS1 Gene

Regulatory Elements for NCK1-AS1 Gene

Promoters for NCK1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around NCK1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NCK1-AS1 Gene

Chromosome:
3
Start:
136,841,726 bp from pter
End:
136,862,063 bp from pter
Size:
20,338 bases
Orientation:
Minus strand

Genomic View for NCK1-AS1 Gene

Genes around NCK1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NCK1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NCK1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCK1-AS1 Gene

Proteins for NCK1-AS1 Gene

Post-translational modifications for NCK1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NCK1-AS1 Gene

Domains & Families for NCK1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NCK1-AS1 Gene

Function for NCK1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NCK1-AS1 Gene

Localization for NCK1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NCK1-AS1 Gene

Pathways & Interactions for NCK1-AS1 Gene

SuperPathways for NCK1-AS1 Gene

No Data Available

Interacting Proteins for NCK1-AS1 Gene

Gene Ontology (GO) - Biological Process for NCK1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NCK1-AS1 Gene

Drugs & Compounds for NCK1-AS1 Gene

No Compound Related Data Available

Transcripts for NCK1-AS1 Gene

mRNA/cDNA for NCK1-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NCK1-AS1 Gene

No ASD Table

Relevant External Links for NCK1-AS1 Gene

GeneLoc Exon Structure for
NCK1-AS1
ECgene alternative splicing isoforms for
NCK1-AS1

Expression for NCK1-AS1 Gene

mRNA expression in normal human tissues for NCK1-AS1 Gene

genes like me logo Genes that share expression patterns with NCK1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for NCK1-AS1 Gene

Orthologs for NCK1-AS1 Gene

Evolution for NCK1-AS1 Gene

ENSEMBL:
Gene Tree for NCK1-AS1 (if available)
TreeFam:
Gene Tree for NCK1-AS1 (if available)

No data available for Orthologs for NCK1-AS1 Gene

Paralogs for NCK1-AS1 Gene

No data available for Paralogs for NCK1-AS1 Gene

Variants for NCK1-AS1 Gene

Sequence variations from dbSNP and Humsavar for NCK1-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1805300 -- 136,857,400(-) tagac(C/T)tctca intron-variant
rs2060303 -- 136,858,944(-) ACAGG(C/T)GTGAG intron-variant
rs2031030 -- 136,860,050(-) CTTAG(A/C)GTAGC intron-variant
rs4549230 -- 136,856,414(+) TAGAT(C/T)TCTTC intron-variant
rs6439671 -- 136,857,029(+) ccagg(C/T)cattt intron-variant

Relevant External Links for NCK1-AS1 Gene

HapMap Linkage Disequilibrium report
NCK1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NCK1-AS1 Gene

Disorders for NCK1-AS1 Gene

Relevant External Links for NCK1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NCK1-AS1

No disorders were found for NCK1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NCK1-AS1 Gene

Publications for NCK1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67

Products for NCK1-AS1 Gene

Sources for NCK1-AS1 Gene

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