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Aliases for NCK1-AS1 Gene

Subcategory (RNA class) for NCK1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for NCK1-AS1 Gene

  • NCK1 Antisense RNA 1 (Head To Head) 2 3 5
  • SLC35G2 Antisense RNA 1 2 3
  • SLC35G2-AS1 3

External Ids for NCK1-AS1 Gene

Previous GeneCards Identifiers for NCK1-AS1 Gene

  • GC03M136562

Summaries for NCK1-AS1 Gene

GeneCards Summary for NCK1-AS1 Gene

NCK1-AS1 (NCK1 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCK1-AS1 Gene

Genomics for NCK1-AS1 Gene

Regulatory Elements for NCK1-AS1 Gene

Enhancers for NCK1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F136929 0.5 ENCODE 17 -68.5 -68505 1.9 TAF1 MAX USF2 CEBPB CEBPG ZNF664 RAD51 CEBPA ZNF548 NCK1-AS1 STAG1 MSL2 NCK1 ENSG00000273486 IL20RB RAD51AP1P1
GH03F136892 1.1 Ensembl ENCODE 16.8 -31.6 -31628 3.1 POLR2A TAF1 JUN BHLHE40 CEBPB ZBTB33 FOS IL20RB NCK1-AS1 ENSG00000273486 NCK1 RAD51AP1P1 GC03P136873
GH03F136883 0.8 Ensembl ENCODE 13.1 -23.2 -23175 3.1 ZFHX2 SMARCA4 POLR2A FOS ZNF24 GABPA EGR2 NCK1 NCK1-AS1 ENSG00000273486 SLC35G2 ENSG00000242968 IL20RB RNU6-789P STAG1 RAD51AP1P1 GC03P136873
GH03F136835 0.4 Ensembl 9.5 +26.1 26063 1.2 SMARCE1 TFAP4 ESRRA GATA2 CEBPB NR2F6 EP300 ZNF558 ENSG00000273486 ENSG00000242968 STAG1 NCK1-AS1 SLC35G2
GH03F136817 0.2 ENCODE 9.5 +42.9 42878 2.8 PKNOX1 ATF1 ZFP64 ARID4B SIN3A DMAP1 ZNF48 GLIS2 FOS SP3 ENSG00000273486 NCK1-AS1 SLC35G2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around NCK1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for NCK1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001374740 -37 3401 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 FOS

Genomic Location for NCK1-AS1 Gene

136,841,726 bp from pter
136,862,063 bp from pter
20,338 bases
Minus strand

Genomic View for NCK1-AS1 Gene

Genes around NCK1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NCK1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NCK1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCK1-AS1 Gene

Proteins for NCK1-AS1 Gene

Post-translational modifications for NCK1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NCK1-AS1 Gene

Domains & Families for NCK1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NCK1-AS1 Gene

Function for NCK1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NCK1-AS1 Gene

Localization for NCK1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NCK1-AS1 Gene

Pathways & Interactions for NCK1-AS1 Gene

SuperPathways for NCK1-AS1 Gene

No Data Available

Interacting Proteins for NCK1-AS1 Gene

Gene Ontology (GO) - Biological Process for NCK1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NCK1-AS1 Gene

Transcripts for NCK1-AS1 Gene

mRNA/cDNA for NCK1-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NCK1-AS1 Gene

No ASD Table

Relevant External Links for NCK1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NCK1-AS1 Gene

mRNA expression in normal human tissues for NCK1-AS1 Gene

genes like me logo Genes that share expression patterns with NCK1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NCK1-AS1 Gene

Orthologs for NCK1-AS1 Gene

Evolution for NCK1-AS1 Gene

Gene Tree for NCK1-AS1 (if available)
Gene Tree for NCK1-AS1 (if available)

No data available for Orthologs for NCK1-AS1 Gene

Paralogs for NCK1-AS1 Gene

No data available for Paralogs for NCK1-AS1 Gene

Variants for NCK1-AS1 Gene

Sequence variations from dbSNP and Humsavar for NCK1-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10470440 -- 136,846,007(+) AAGGG(C/T)GGACT intron-variant
rs1052618 -- 136,855,659(+) AAGAA(A/G)GCAGG intron-variant, reference, missense
rs1052620 -- 136,855,679(+) AAATA(C/T)TAGAC intron-variant, reference, synonymous-codon
rs10539700 -- 136,852,229(+) GGAAG(-/AAG)GACTG intron-variant, cds-indel
rs10636532 -- 136,859,459(+) GGACA(-/AC)AGTTT intron-variant

Relevant External Links for NCK1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NCK1-AS1 Gene

Disorders for NCK1-AS1 Gene

Relevant External Links for NCK1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for NCK1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NCK1-AS1 Gene

Publications for NCK1-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for NCK1-AS1 Gene

Sources for NCK1-AS1 Gene

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