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Aliases for NCBP2-AS2 Gene

Subcategory (RNA class) for NCBP2-AS2 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for NCBP2-AS2 Gene

  • NCBP2 Antisense RNA 2 (Head To Head) 2 3
  • NCBP2 Antisense Gene Protein 2 4
  • NCBP2 Antisense RNA 2 4

External Ids for NCBP2-AS2 Gene

ORGUL Members for NCBP2-AS2 Gene

Previous GeneCards Identifiers for NCBP2-AS2 Gene

  • GC03P196671

Summaries for NCBP2-AS2 Gene

GeneCards Summary for NCBP2-AS2 Gene

NCBP2-AS2 (NCBP2 Antisense RNA 2 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCBP2-AS2 Gene

Genomics for NCBP2-AS2 Gene

Genomic Location for NCBP2-AS2 Gene

Start:
196,942,623 bp from pter
End:
196,944,013 bp from pter
Size:
1,391 bases
Orientation:
Plus strand

Genomic View for NCBP2-AS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NCBP2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCBP2-AS2 Gene

No data available for Regulatory Elements for NCBP2-AS2 Gene

Proteins for NCBP2-AS2 Gene

  • Protein details for NCBP2-AS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q69YL0-NCAS2_HUMAN
    Recommended name:
    Uncharacterized protein NCBP2-AS2
    Protein Accession:
    Q69YL0
    Secondary Accessions:

    Protein attributes for NCBP2-AS2 Gene

    Size:
    99 amino acids
    Molecular mass:
    10891 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NCBP2-AS2 Gene

Proteomics data for NCBP2-AS2 Gene at MOPED

Post-translational modifications for NCBP2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NCBP2-AS2 Gene

Domains for NCBP2-AS2 Gene

Gene Families for NCBP2-AS2 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for NCBP2-AS2 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NCBP2-AS2: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NCBP2-AS2 Gene

Function for NCBP2-AS2 Gene

Phenotypes for NCBP2-AS2 Gene

GenomeRNAi human phenotypes for NCBP2-AS2:
genes like me logo Genes that share phenotypes with NCBP2-AS2: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NCBP2-AS2 Gene

Localization for NCBP2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NCBP2-AS2 Gene

Pathways for NCBP2-AS2 Gene

SuperPathways for NCBP2-AS2 Gene

No Data Available

Interacting Proteins for NCBP2-AS2 Gene

Gene Ontology (GO) - Biological Process for NCBP2-AS2 Gene

None

No data available for Pathways by source for NCBP2-AS2 Gene

Transcripts for NCBP2-AS2 Gene

mRNA/cDNA for NCBP2-AS2 Gene

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate NCBP2-AS2
    • Block miRNA regulation of NCBP2-AS2 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for NCBP2-AS2

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for NCBP2-AS2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for NCBP2-AS2 Gene

    No ASD Table

    Relevant External Links for NCBP2-AS2 Gene

    GeneLoc Exon Structure for
    NCBP2-AS2
    ECgene alternative splicing isoforms for
    NCBP2-AS2

    Expression for NCBP2-AS2 Gene

    mRNA expression in normal human tissues for NCBP2-AS2 Gene

    Integrated Proteomics: protein expression from ProteomicsDB and MOPED for NCBP2-AS2 Gene

    genes like me logo Genes that share expressions with NCBP2-AS2: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for NCBP2-AS2 Gene

    Orthologs for NCBP2-AS2 Gene

    This gene was present in the common ancestor of human and mouse.

    Orthologs for NCBP2-AS2 Gene

    Organism Taxonomy Gene Similarity Type Details
    mouse
    (Mus musculus)
    Mammalia 0610012G03Rik 16
    Species with no ortholog for NCBP2-AS2:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chicken (Gallus gallus)
    • chimpanzee (Pan troglodytes)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • cow (Bos Taurus)
    • dog (Canis familiaris)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • fruit fly (Drosophila melanogaster)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • lizard (Anolis carolinensis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • platypus (Ornithorhynchus anatinus)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea squirt (Ciona intestinalis)
    • sea squirt (Ciona savignyi)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)
    • worm (Caenorhabditis elegans)
    • zebrafish (Danio rerio)

    Evolution for NCBP2-AS2 Gene

    ENSEMBL:
    Gene Tree for NCBP2-AS2 (if available)
    TreeFam:
    Gene Tree for NCBP2-AS2 (if available)

    Paralogs for NCBP2-AS2 Gene

    No data available for Paralogs for NCBP2-AS2 Gene

    Variants for NCBP2-AS2 Gene

    Relevant External Links for NCBP2-AS2 Gene

    HapMap Linkage Disequilibrium report
    NCBP2-AS2

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for NCBP2-AS2 Gene

    Disorders for NCBP2-AS2 Gene

    No disorders were found for NCBP2-AS2 Gene.

    No data available for UniProtKB/Swiss-Prot for NCBP2-AS2 Gene

    Publications for NCBP2-AS2 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
    3. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3
    4. An important role for CDK2 in G1 to S checkpoint activation and DNA damage response in human embryonic stem cells. (PMID: 21319273) Neganova I. … Lako M. (Stem Cells 2011) 3
    5. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4

    Products for NCBP2-AS2 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate NCBP2-AS2
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for NCBP2-AS2
      • Block miRNA regulation of NCBP2-AS2 using miScript Target Protectors

      Sources for NCBP2-AS2 Gene

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