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Aliases for NCBP2-AS1 Gene

Subcategory (RNA class) for NCBP2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NCBP2-AS1 Gene

  • NCBP2 Antisense RNA 1 2 3 5
  • NCBP2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NCBP2-AS1 Gene

Previous GeneCards Identifiers for NCBP2-AS1 Gene

  • GC00U933331
  • GC03P196667

Summaries for NCBP2-AS1 Gene

GeneCards Summary for NCBP2-AS1 Gene

NCBP2-AS1 (NCBP2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCBP2-AS1 Gene

Genomics for NCBP2-AS1 Gene

Regulatory Elements for NCBP2-AS1 Gene

Enhancers for NCBP2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G196527 1.7 FANTOM5 ENCODE dbSUPER 9.4 -411.3 -411334 1.8 PKNOX1 ATF1 CREB3L1 ARNT SIN3A YY1 TCF12 ZNF121 GTF3C2 ZNF766 FBXO45 RNF168 SDHAP2 LINC00969 ENSG00000230732 WDR53 MUC20P1 UBXN7 CEP19 NCBP2
GH03G196983 1.4 ENCODE dbSUPER 10.6 +48.0 48014 7.9 HDGF FOXA2 PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 YBX1 SLC30A9 NCBP2 NCBP2-AS1 PIGZ PAK2 RPSAP69 MELTF-AS1
GH03G196938 1.2 ENCODE 11.6 +2.5 2501 7.3 MLX CREB3L1 AGO1 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 SP3 NFYC NCBP2-AS2 PIGZ SENP5 NCBP2-AS1 NCBP2
GH03G196790 1.3 Ensembl ENCODE 10.3 -147.3 -147290 5.1 HDGF ATF1 FOXA2 PKNOX1 ARNT SIN3A ARID4B BRCA1 ZNF2 ZBTB7B CEP19 SENP5 NCBP2-AS1 NCBP2 MELTF-AS1 PIGX PAK2 SDHAP1 TCTEX1D2 GC03M196785
GH03G196562 1.2 FANTOM5 ENCODE 10.2 -375.9 -375895 2.4 NFIB ARNT GTF3C2 ZNF366 EGR1 FOS CREM MIER1 CEBPB ZEB2 SDHAP2 LINC00969 ENSG00000230732 MUC20P1 CEP19 UBXN7 NCBP2 NCBP2-AS1 RNF168 RNU6-910P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NCBP2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NCBP2-AS1 Gene

Chromosome:
3
Start:
196,939,877 bp from pter
End:
196,942,534 bp from pter
Size:
2,658 bases
Orientation:
Plus strand

Genomic View for NCBP2-AS1 Gene

Genes around NCBP2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NCBP2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NCBP2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for NCBP2-AS1 Gene

Proteins for NCBP2-AS1 Gene

Post-translational modifications for NCBP2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NCBP2-AS1 Gene

Domains & Families for NCBP2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NCBP2-AS1 Gene

Function for NCBP2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NCBP2-AS1 Gene

Localization for NCBP2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NCBP2-AS1 Gene

Pathways & Interactions for NCBP2-AS1 Gene

SuperPathways for NCBP2-AS1 Gene

No Data Available

Interacting Proteins for NCBP2-AS1 Gene

Gene Ontology (GO) - Biological Process for NCBP2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NCBP2-AS1 Gene

Drugs & Compounds for NCBP2-AS1 Gene

No Compound Related Data Available

Transcripts for NCBP2-AS1 Gene

mRNA/cDNA for NCBP2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NCBP2-AS1 Gene

No ASD Table

Relevant External Links for NCBP2-AS1 Gene

GeneLoc Exon Structure for
NCBP2-AS1
ECgene alternative splicing isoforms for
NCBP2-AS1

Expression for NCBP2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NCBP2-AS1 Gene

genes like me logo Genes that share expression patterns with NCBP2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NCBP2-AS1 Gene

Orthologs for NCBP2-AS1 Gene

Evolution for NCBP2-AS1 Gene

ENSEMBL:
Gene Tree for NCBP2-AS1 (if available)
TreeFam:
Gene Tree for NCBP2-AS1 (if available)

No data available for Orthologs for NCBP2-AS1 Gene

Paralogs for NCBP2-AS1 Gene

No data available for Paralogs for NCBP2-AS1 Gene

Variants for NCBP2-AS1 Gene

Relevant External Links for NCBP2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NCBP2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NCBP2-AS1 Gene

Disorders for NCBP2-AS1 Gene

No disorders were found for NCBP2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NCBP2-AS1 Gene

Publications for NCBP2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for NCBP2-AS1 Gene

Sources for NCBP2-AS1 Gene

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