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Aliases for NCAPG2 Gene

Aliases for NCAPG2 Gene

  • Non-SMC Condensin II Complex, Subunit G2 2 3
  • Leucine Zipper Protein 5 2 3 4
  • Chromosome-Associated Protein G2 3 4
  • HCAP-G2 3 4
  • CAP-G2 3 4
  • LUZP5 3 4
  • CAPG2 3 6
  • MTB 3 6
  • Non-SMC Condensin II Complex Subunit G2 4
  • Condensin-2 Complex Subunit G2 3
  • More Than Blood Homolog 3

External Ids for NCAPG2 Gene

Previous Symbols for NCAPG2 Gene

  • LUZP5

Summaries for NCAPG2 Gene

Entrez Gene Summary for NCAPG2 Gene

  • This gene encodes a protein that belongs to the Condensin2nSMC family of proteins. The encoded protein is a regulatory subunit of the condensin II complex which, along with the condensin I complex, plays a role in chromosome assembly and segregation during mitosis. A similar protein in mouse is required for early development of the embryo. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013]

GeneCards Summary for NCAPG2 Gene

NCAPG2 (Non-SMC Condensin II Complex, Subunit G2) is a Protein Coding gene. Among its related pathways are Cell Cycle, Mitotic and Cell Cycle, Mitotic. GO annotations related to this gene include methylated histone binding.

UniProtKB/Swiss-Prot for NCAPG2 Gene

  • Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.

Gene Wiki entry for NCAPG2 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NCAPG2 Gene

Genomics for NCAPG2 Gene

Genomic Location for NCAPG2 Gene

Start:
158,631,169 bp from pter
End:
158,704,831 bp from pter
Size:
73,663 bases
Orientation:
Minus strand

Genomic View for NCAPG2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NCAPG2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NCAPG2 Gene

Regulatory Elements for NCAPG2 Gene

Proteins for NCAPG2 Gene

  • Protein details for NCAPG2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q86XI2-CNDG2_HUMAN
    Recommended name:
    Condensin-2 complex subunit G2
    Protein Accession:
    Q86XI2
    Secondary Accessions:
    • A4D228
    • Q7Z3J9
    • Q8WUG8
    • Q9BRX6
    • Q9H8S2
    • Q9H9K6

    Protein attributes for NCAPG2 Gene

    Size:
    1143 amino acids
    Molecular mass:
    130960 Da
    Quaternary structure:
    • Component of the condensin-2 complex, which contains the SMC2 and SMC4 heterodimer, and 3 non SMC subunits that probably regulate the complex: NCAPH2, NCAPD3 and NCAPG2.
    SequenceCaution:
    • Sequence=AAH20560.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAB14219.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAB14534.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for NCAPG2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for NCAPG2 Gene

Proteomics data for NCAPG2 Gene at MOPED

Post-translational modifications for NCAPG2 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys45, Lys139, Lys178, Lys332, Lys402, Lys406, Lys422, Lys451, Lys474, Lys496, Lys650, Lys660, Lys796, Lys809, Lys1025, and Lys1054

Other Protein References for NCAPG2 Gene

No data available for DME Specific Peptides for NCAPG2 Gene

Domains for NCAPG2 Gene

Protein Domains for NCAPG2 Gene

UniProtKB/Swiss-Prot:

CNDG2_HUMAN
Similarity:
  • Contains 1 HEAT repeat.:
    • Q86XI2
genes like me logo Genes that share domains with NCAPG2: view

No data available for Gene Families for NCAPG2 Gene

Function for NCAPG2 Gene

Molecular function for NCAPG2 Gene

UniProtKB/Swiss-Prot Function: Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.

Gene Ontology (GO) - Molecular Function for NCAPG2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005488 binding --
GO:0005515 protein binding IPI 17268547
GO:0035064 methylated histone binding IDA 20622854
genes like me logo Genes that share ontologies with NCAPG2: view

Phenotypes for NCAPG2 Gene

MGI mutant phenotypes for NCAPG2:
inferred from 1 alleles
GenomeRNAi human phenotypes for NCAPG2:
genes like me logo Genes that share phenotypes with NCAPG2: view

Animal Models for NCAPG2 Gene

MGI Knock Outs for NCAPG2:

miRNA for NCAPG2 Gene

miRTarBase miRNAs that target NCAPG2

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targeting and HOMER Transcription for NCAPG2 Gene

Localization for NCAPG2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for NCAPG2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for NCAPG2 Gene COMPARTMENTS Subcellular localization image for NCAPG2 gene
Compartment Confidence
nucleus 5
plasma membrane 3
cytosol 1
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for NCAPG2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005654 nucleoplasm TAS --
GO:0016020 membrane IDA 19946888
genes like me logo Genes that share ontologies with NCAPG2: view

Pathways for NCAPG2 Gene

genes like me logo Genes that share pathways with NCAPG2: view

Pathways by source for NCAPG2 Gene

1 GeneGo (Thomson Reuters Life Sciences Research) pathway for NCAPG2 Gene

Gene Ontology (GO) - Biological Process for NCAPG2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000278 mitotic cell cycle TAS --
GO:0001833 inner cell mass cell proliferation IEA --
GO:0007067 mitotic nuclear division IEA --
GO:0030261 chromosome condensation IEA --
GO:0051301 cell division IEA --
genes like me logo Genes that share ontologies with NCAPG2: view

Transcripts for NCAPG2 Gene

Unigene Clusters for NCAPG2 Gene

Non-SMC condensin II complex, subunit G2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NCAPG2 Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19a · 19b ^ 20a · 20b ^ 21 ^
SP1: - - - - -
SP2: - - - - - -
SP3: - - - - - -
SP4: -
SP5: -
SP6:
SP7: - - - - -
SP8:
SP9:
SP10:

ExUns: 22a · 22b · 22c ^ 23 ^ 24 ^ 25 ^ 26 ^ 27 ^ 28 ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 ^ 34 ^ 35
SP1: -
SP2:
SP3: -
SP4:
SP5:
SP6: - - -
SP7:
SP8:
SP9:
SP10:

Relevant External Links for NCAPG2 Gene

GeneLoc Exon Structure for
NCAPG2
ECgene alternative splicing isoforms for
NCAPG2

Expression for NCAPG2 Gene

mRNA expression in normal human tissues for NCAPG2 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for NCAPG2 Gene

SOURCE GeneReport for Unigene cluster for NCAPG2 Gene Hs.18616

genes like me logo Genes that share expressions with NCAPG2: view

Orthologs for NCAPG2 Gene

This gene was present in the common ancestor of animals.

Orthologs for NCAPG2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia NCAPG2 36
  • 81.32 (n)
  • 81.67 (a)
NCAPG2 37
  • 82 (a)
OneToOne
dog
(Canis familiaris)
Mammalia NCAPG2 36
  • 85.82 (n)
  • 87.26 (a)
NCAPG2 37
  • 87 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ncapg2 36
  • 83.11 (n)
  • 81.27 (a)
Ncapg2 16
Ncapg2 37
  • 81 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia NCAPG2 37
  • 71 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia NCAPG2 37
  • 70 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ncapg2 36
  • 82.41 (n)
  • 81.88 (a)
chicken
(Gallus gallus)
Aves LOC100859557 36
  • 67.37 (n)
  • 62.01 (a)
NCAPG2 37
  • 62 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia NCAPG2 37
  • 57 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ncapg2 36
  • 64.74 (n)
  • 60.96 (a)
zebrafish
(Danio rerio)
Actinopterygii ncapg2 36
  • 54.5 (n)
  • 46.86 (a)
ncapg2 37
  • 46 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea capg-2 37
  • 19 (a)
OneToOne
Species with no ortholog for NCAPG2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for NCAPG2 Gene

ENSEMBL:
Gene Tree for NCAPG2 (if available)
TreeFam:
Gene Tree for NCAPG2 (if available)

Paralogs for NCAPG2 Gene

No data available for Paralogs for NCAPG2 Gene

Variants for NCAPG2 Gene

Sequence variations from dbSNP and Humsavar for NCAPG2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs10772 -- 158,631,435(+) CCATT(C/T)ATACC utr-variant-3-prime, nc-transcript-variant
rs140808 -- 158,655,001(-) AAAAC(-/TTAC)AGGGA intron-variant
rs748949 -- 158,704,586(-) GTGCG(A/G)GCAGT intron-variant
rs749959 -- 158,639,210(-) GGATC(A/G)CTTGA intron-variant
rs877279 -- 158,638,215(-) TTCCA(A/G)GAGAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NCAPG2 Gene

Variant ID Type Subtype PubMed ID
dgv7578n71 CNV Gain 21882294
nsv889644 CNV Gain 21882294
esv1002284 CNV Insertion 20482838
nsv438013 CNV Loss 16468122
esv275466 CNV Gain+Loss 21479260
esv2736017 CNV Deletion 23290073
esv2736018 CNV Deletion 23290073
esv2560438 CNV Insertion 19546169
esv1010957 CNV Insertion 20482838
nsv507432 CNV Insertion 20534489
esv2736019 CNV Deletion 23290073
dgv1216e201 CNV Deletion 23290073
esv2229751 CNV Deletion 18987734
esv2736021 CNV Deletion 23290073
dgv1217e201 CNV Deletion 23290073
esv22916 CNV Gain+Loss 19812545
esv1218051 CNV Insertion 17803354
esv2736026 CNV Deletion 23290073
esv993130 CNV Deletion 20482838
esv25694 CNV Loss 19812545
esv2736029 CNV Deletion 23290073

Relevant External Links for NCAPG2 Gene

HapMap Linkage Disequilibrium report
NCAPG2
Human Gene Mutation Database (HGMD)
NCAPG2

Disorders for NCAPG2 Gene

No disorders were found for NCAPG2 Gene.

No data available for UniProtKB/Swiss-Prot for NCAPG2 Gene

Publications for NCAPG2 Gene

  1. Differential contributions of condensin I and condensin II to mitotic chromosome architecture in vertebrate cells. (PMID: 14532007) Ono T. … Hirano T. (Cell 2003) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Large-scale analysis of the human ubiquitin-related proteome. (PMID: 16196087) Matsumoto M. … Nakayama K.I. (Proteomics 2005) 3

Products for NCAPG2 Gene

Sources for NCAPG2 Gene

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