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Aliases for NBPF2P Gene

Aliases for NBPF2P Gene

  • Neuroblastoma Breakpoint Family Member 2, Pseudogene 2 3 5
  • Neuroblastoma Breakpoint Family, Member 2, Pseudogene 2

External Ids for NBPF2P Gene

Previous GeneCards Identifiers for NBPF2P Gene

  • GC01M021484
  • GC01M021622
  • GC01M021749

Summaries for NBPF2P Gene

Entrez Gene Summary for NBPF2P Gene

  • This pseudogene is a member of the neuroblastoma breakpoint family (NBPF) which consists of dozens of recently duplicated genes primarily located in segmental duplications on human chromosome 1. This gene family has experienced its greatest expansion within the human lineage and has expanded, to a lesser extent, among primates in general. Members of this gene family are characterized by tandemly repeated copies of DUF1220 protein domains. Gene copy number variations in the human chromosomal region 1q21.1, where most DUF1220 domains are located, have been implicated in a number of developmental and neurogenetic diseases such as microcephaly, macrocephaly, autism, schizophrenia, mental retardation, congenital heart disease, neuroblastoma, and congenital kidney and urinary tract anomalies. Altered expression of some gene family members is associated with several types of cancer. This gene family contains numerous pseudogenes. [provided by RefSeq, Apr 2013]

GeneCards Summary for NBPF2P Gene

NBPF2P (Neuroblastoma Breakpoint Family Member 2, Pseudogene) is a Pseudogene. Diseases associated with NBPF2P include Neuroblastoma.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NBPF2P Gene

Genomics for NBPF2P Gene

Regulatory Elements for NBPF2P Gene

Enhancers for NBPF2P Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around NBPF2P on UCSC Golden Path with GeneCards custom track

Promoters for NBPF2P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around NBPF2P on UCSC Golden Path with GeneCards custom track

Genomic Location for NBPF2P Gene

Chromosome:
1
Start:
21,423,108 bp from pter
End:
21,427,967 bp from pter
Size:
4,860 bases
Orientation:
Minus strand

Genomic View for NBPF2P Gene

Genes around NBPF2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NBPF2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NBPF2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NBPF2P Gene

Proteins for NBPF2P Gene

Post-translational modifications for NBPF2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for NBPF2P Gene

Domains & Families for NBPF2P Gene

Gene Families for NBPF2P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NBPF2P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NBPF2P Gene

Function for NBPF2P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NBPF2P Gene

Localization for NBPF2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NBPF2P Gene

Pathways & Interactions for NBPF2P Gene

SuperPathways for NBPF2P Gene

No Data Available

Interacting Proteins for NBPF2P Gene

Gene Ontology (GO) - Biological Process for NBPF2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NBPF2P Gene

Drugs & Compounds for NBPF2P Gene

No Compound Related Data Available

Expression for NBPF2P Gene

mRNA expression in normal human tissues for NBPF2P Gene

mRNA differential expression in normal tissues according to GTEx for NBPF2P Gene

This gene is overexpressed in Testis (x4.1).
genes like me logo Genes that share expression patterns with NBPF2P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for NBPF2P Gene

Orthologs for NBPF2P Gene

Evolution for NBPF2P Gene

ENSEMBL:
Gene Tree for NBPF2P (if available)
TreeFam:
Gene Tree for NBPF2P (if available)

No data available for Orthologs for NBPF2P Gene

Paralogs for NBPF2P Gene

No data available for Paralogs for NBPF2P Gene

Variants for NBPF2P Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for NBPF2P Gene

Disorders for NBPF2P Gene

MalaCards: The human disease database

(1) MalaCards diseases for NBPF2P Gene - From: GeneCards

Disorder Aliases PubMed IDs
neuroblastoma
  • neuroblastoma 1
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with NBPF2P: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for NBPF2P Gene

Publications for NBPF2P Gene

  1. A novel gene family NBPF: intricate structure generated by gene duplications during primate evolution. (PMID: 16079250) Vandepoele K. … van Roy F. (Mol. Biol. Evol. 2005) 2 3 67
  2. Evolutionary history and genome organization of DUF1220 protein domains. (PMID: 22973535) O'Bleness M.S. … Sikela J.M. (G3 (Bethesda) 2012) 3

Products for NBPF2P Gene

Sources for NBPF2P Gene

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