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Aliases for NAV2-IT1 Gene

Subcategory (RNA class) for NAV2-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NAV2-IT1 Gene

  • NAV2 Intronic Transcript 1 2 3 5
  • NAV2 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for NAV2-IT1 Gene

Previous GeneCards Identifiers for NAV2-IT1 Gene

  • GC00U933937

Summaries for NAV2-IT1 Gene

GeneCards Summary for NAV2-IT1 Gene

NAV2-IT1 (NAV2 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for NAV2-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NAV2-IT1 Gene

Genomics for NAV2-IT1 Gene

GeneHancer (GH) Regulatory Elements for NAV2-IT1 Gene

Promoters and enhancers for NAV2-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I019380 Enhancer 0.8 Ensembl ENCODE 550.8 +0.2 203 1.3 NCOA3 FOSL1 JUND JUN CREB1 FOSL2 ELF1 FOS GABPA NAV2-IT1 NAV2 RNA5SP335 GC11M019401
GH11I019365 Enhancer 0.9 Ensembl ENCODE 0.4 -11.8 -11781 5.6 JUN MAX EBF1 YY1 CTBP1 GATA3 POLR2A FOS EZH2 HLF NAV2 NAV2-AS5 NAV2-IT1 GC11P019350 GC11P019352
GH11I019373 Enhancer 0.7 Ensembl ENCODE 0.4 -6.0 -5953 1.7 JUND JUN USF2 CEBPB FOSL2 FOS NAV2 NAV2-IT1 GC11P019350 GC11P019352
GH11I019389 Enhancer 0.7 ENCODE 0.4 +9.6 9595 1.9 NCOA3 PKNOX1 FOXA2 MAX ZIC2 RAD21 YY1 GATA3 HNF4G RXRA NAV2-AS4 HTATIP2 NAV2-IT1 GC11M019401 RNA5SP335 NAV2
GH11I019398 Enhancer 0.7 ENCODE 0.4 +18.4 18448 1.2 MAX FEZF1 RAD21 YY1 HIC1 ATF7 MAFK RXRA REST ZNF843 NAV2 GC11M019401 RNA5SP335 NAV2-IT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NAV2-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NAV2-IT1 Gene

Genomic Locations for NAV2-IT1 Gene
chr11:19,380,484-19,385,014
(GRCh38/hg38)
Size:
4,531 bases
Orientation:
Plus strand
chr11:19,402,031-19,406,561
(GRCh37/hg19)

Genomic View for NAV2-IT1 Gene

Genes around NAV2-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NAV2-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NAV2-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for NAV2-IT1 Gene

Proteins for NAV2-IT1 Gene

Post-translational modifications for NAV2-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NAV2-IT1 Gene

Domains & Families for NAV2-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NAV2-IT1 Gene

Function for NAV2-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NAV2-IT1 Gene

Localization for NAV2-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NAV2-IT1 Gene

Pathways & Interactions for NAV2-IT1 Gene

SuperPathways for NAV2-IT1 Gene

No Data Available

Interacting Proteins for NAV2-IT1 Gene

Gene Ontology (GO) - Biological Process for NAV2-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NAV2-IT1 Gene

Drugs & Compounds for NAV2-IT1 Gene

No Compound Related Data Available

Transcripts for NAV2-IT1 Gene

mRNA/cDNA for NAV2-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NAV2-IT1 Gene

No ASD Table

Relevant External Links for NAV2-IT1 Gene

GeneLoc Exon Structure for
NAV2-IT1
ECgene alternative splicing isoforms for
NAV2-IT1

Expression for NAV2-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NAV2-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for NAV2-IT1 Gene

This gene is overexpressed in Thyroid (x5.6) and Adipose - Visceral (Omentum) (x4.8).
genes like me logo Genes that share expression patterns with NAV2-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NAV2-IT1 Gene

Orthologs for NAV2-IT1 Gene

Evolution for NAV2-IT1 Gene

ENSEMBL:
Gene Tree for NAV2-IT1 (if available)
TreeFam:
Gene Tree for NAV2-IT1 (if available)

No data available for Orthologs for NAV2-IT1 Gene

Paralogs for NAV2-IT1 Gene

No data available for Paralogs for NAV2-IT1 Gene

Variants for NAV2-IT1 Gene

Additional Variant Information for NAV2-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NAV2-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NAV2-IT1 Gene

Disorders for NAV2-IT1 Gene

Additional Disease Information for NAV2-IT1

No disorders were found for NAV2-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NAV2-IT1 Gene

Publications for NAV2-IT1 Gene

No publications were found for NAV2-IT1 Gene.

Products for NAV2-IT1 Gene

Sources for NAV2-IT1 Gene

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