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Aliases for NAV2-AS2 Gene

Subcategory (RNA class) for NAV2-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NAV2-AS2 Gene

  • NAV2 Antisense RNA 2 2 3 5
  • NAV2 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for NAV2-AS2 Gene

Previous GeneCards Identifiers for NAV2-AS2 Gene

  • GC00U933615

Summaries for NAV2-AS2 Gene

GeneCards Summary for NAV2-AS2 Gene

NAV2-AS2 (NAV2 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NAV2-AS2 Gene

Genomics for NAV2-AS2 Gene

Regulatory Elements for NAV2-AS2 Gene

Enhancers for NAV2-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F020043 1.1 Ensembl ENCODE 0.8 +3.9 3861 3.1 BCOR HDAC1 CTCF ESRRA ZMYM3 ZBTB40 RAD21 FOSL1 DIDO1 ZNF766 GC11P020044 NAV2-AS2
GH11F020049 0.8 FANTOM5 ENCODE 0.8 -1.4 -1407 2.0 ZNF146 ZNF680 TEAD4 ZBTB20 NAV2-AS2 GC11M020007
GH11F020047 0.8 ENCODE 0.8 +0.8 820 1.1 SOX13 PKNOX1 INSM2 FEZF1 ZIC2 CTBP1 ZNF302 ZNF19 NFE2 EGR2 GC11P020044 NAV2-AS2
GH11F020054 0.9 ENCODE 0.4 -9.0 -8994 7.3 HDAC1 PKNOX1 TBL1XR1 ARNT INSM2 ZNF76 FEZF1 RAD21 CHAMP1 YY1 GC11M020007 NAV2-AS2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NAV2-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for NAV2-AS2 Gene

Chromosome:
11
Start:
20,043,775 bp from pter
End:
20,049,303 bp from pter
Size:
5,529 bases
Orientation:
Minus strand

Genomic View for NAV2-AS2 Gene

Genes around NAV2-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NAV2-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NAV2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NAV2-AS2 Gene

Proteins for NAV2-AS2 Gene

Post-translational modifications for NAV2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NAV2-AS2 Gene

Domains & Families for NAV2-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NAV2-AS2 Gene

Function for NAV2-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NAV2-AS2 Gene

Localization for NAV2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NAV2-AS2 Gene

Pathways & Interactions for NAV2-AS2 Gene

SuperPathways for NAV2-AS2 Gene

No Data Available

Interacting Proteins for NAV2-AS2 Gene

Gene Ontology (GO) - Biological Process for NAV2-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NAV2-AS2 Gene

Transcripts for NAV2-AS2 Gene

mRNA/cDNA for NAV2-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NAV2-AS2 Gene

No ASD Table

Relevant External Links for NAV2-AS2 Gene

GeneLoc Exon Structure for
NAV2-AS2
ECgene alternative splicing isoforms for
NAV2-AS2

Expression for NAV2-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NAV2-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for NAV2-AS2 Gene

This gene is overexpressed in Heart - Left Ventricle (x11.0) and Heart - Atrial Appendage (x9.3).
genes like me logo Genes that share expression patterns with NAV2-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NAV2-AS2 Gene

Orthologs for NAV2-AS2 Gene

Evolution for NAV2-AS2 Gene

ENSEMBL:
Gene Tree for NAV2-AS2 (if available)
TreeFam:
Gene Tree for NAV2-AS2 (if available)

No data available for Orthologs for NAV2-AS2 Gene

Paralogs for NAV2-AS2 Gene

No data available for Paralogs for NAV2-AS2 Gene

Variants for NAV2-AS2 Gene

Sequence variations from dbSNP and Humsavar for NAV2-AS2 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs10219212 -- 20,044,809(+) TCACG(A/G)TACAT intron-variant
rs10833230 -- 20,048,039(+) AGAAT(A/G)GCATT intron-variant
rs11025363 -- 20,046,065(+) GCACC(A/G)TGGCT intron-variant
rs111315415 -- 20,049,484(+) CAGTT(A/T)TATCC intron-variant, upstream-variant-2KB
rs111755163 -- 20,048,552(+) TAGTG(C/T)CTAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NAV2-AS2 Gene

Variant ID Type Subtype PubMed ID
dgv331e212 CNV loss 25503493
nsv516382 CNV gain 19592680

Relevant External Links for NAV2-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NAV2-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NAV2-AS2 Gene

Disorders for NAV2-AS2 Gene

Relevant External Links for NAV2-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NAV2-AS2

No disorders were found for NAV2-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NAV2-AS2 Gene

Publications for NAV2-AS2 Gene

No publications were found for NAV2-AS2 Gene.

Products for NAV2-AS2 Gene

Sources for NAV2-AS2 Gene

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