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Aliases for NATD1 Gene

Aliases for NATD1 Gene

  • N-Acetyltransferase Domain Containing 1 2 3 5
  • N-Acetyltransferase Domain-Containing Protein 1 3 4
  • Transcript Expressed During Hematopoiesis 2 2 3
  • Gene Trap Locus F3b 2 3
  • C17orf103 3 4
  • Gtlf3b 3 4
  • Chromosome 17 Open Reading Frame 103 2
  • Protein GTLF3B 3
  • Protein NATD1 3

External Ids for NATD1 Gene

Previous HGNC Symbols for NATD1 Gene

  • C17orf103

Summaries for NATD1 Gene

GeneCards Summary for NATD1 Gene

NATD1 (N-Acetyltransferase Domain Containing 1) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NATD1 Gene

Genomics for NATD1 Gene

Regulatory Elements for NATD1 Gene

Enhancers for NATD1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around NATD1 on UCSC Golden Path with GeneCards custom track

Promoters for NATD1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around NATD1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NATD1 Gene

21,238,870 bp from pter
21,253,410 bp from pter
14,541 bases
Minus strand

Genomic View for NATD1 Gene

Genes around NATD1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NATD1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NATD1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NATD1 Gene

Proteins for NATD1 Gene

  • Protein details for NATD1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Protein NATD1
    Protein Accession:
    Secondary Accessions:
    • A8MWQ7
    • B3KX70

    Protein attributes for NATD1 Gene

    113 amino acids
    Molecular mass:
    13032 Da
    Quaternary structure:
    No Data Available

neXtProt entry for NATD1 Gene

Post-translational modifications for NATD1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for NATD1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for NATD1 Gene

Domains & Families for NATD1 Gene

Protein Domains for NATD1 Gene

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 N-acetyltransferase domain.
  • Belongs to the NATD1 family.
  • Contains 1 N-acetyltransferase domain.
  • Belongs to the NATD1 family.
genes like me logo Genes that share domains with NATD1: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for NATD1 Gene

Function for NATD1 Gene

Gene Ontology (GO) - Molecular Function for NATD1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with NATD1: view
genes like me logo Genes that share phenotypes with NATD1: view

Animal Models for NATD1 Gene

MGI Knock Outs for NATD1:

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for NATD1 Gene

Localization for NATD1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NATD1 Gene

Pathways & Interactions for NATD1 Gene

SuperPathways for NATD1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for NATD1 Gene


No data available for Pathways by source and SIGNOR curated interactions for NATD1 Gene

Drugs & Compounds for NATD1 Gene

No Compound Related Data Available

Transcripts for NATD1 Gene

mRNA/cDNA for NATD1 Gene

(1) REFSEQ mRNAs :
(288) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for NATD1 Gene

No ASD Table

Relevant External Links for NATD1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NATD1 Gene

mRNA expression in normal human tissues for NATD1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for NATD1 Gene

This gene is overexpressed in Bone (60.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for NATD1 Gene

Protein tissue co-expression partners for NATD1 Gene

NURSA nuclear receptor signaling pathways regulating expression of NATD1 Gene:

genes like me logo Genes that share expression patterns with NATD1: view

Primer Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for NATD1 Gene

Orthologs for NATD1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for NATD1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia C19H17orf103 34
  • 90.86 (n)
  • 92.04 (a)
(Mus musculus)
Mammalia Gm16515 34
  • 90.91 (n)
  • 94.55 (a)
Natd1 16
(Pan troglodytes)
Mammalia C17H17orf103 34
  • 98.82 (n)
  • 98.23 (a)
(Rattus norvegicus)
Mammalia Gtlf3b 34
  • 91.21 (n)
  • 94.55 (a)
(Gallus gallus)
Aves C14H17ORF103 34
  • 84.24 (n)
  • 96.36 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia c17orf103 34
  • 72.17 (n)
  • 86.24 (a)
Str.20480 34
African clawed frog
(Xenopus laevis)
Amphibia Xl.3877 34
(Danio rerio)
Actinopterygii zgc:110779 34
  • 71.65 (n)
  • 75.7 (a)
Species where no ortholog for NATD1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NATD1 Gene

Gene Tree for NATD1 (if available)
Gene Tree for NATD1 (if available)

Paralogs for NATD1 Gene

No data available for Paralogs for NATD1 Gene

Variants for NATD1 Gene

Sequence variations from dbSNP and Humsavar for NATD1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs12449311 - 21,244,207(+) CAGGA(C/T)GGCCC reference, missense
rs6902 -- 21,239,259(-) CCCAC(G/T)CAGCT utr-variant-3-prime
rs7948 -- 21,239,264(-) AACTT(C/T)CCACT utr-variant-3-prime
rs1007178 -- 21,247,793(-) GGCAT(A/C)GCCTC intron-variant
rs1044872 -- 21,239,871(-) AGGAC(A/T)ATTTC utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for NATD1 Gene

Variant ID Type Subtype PubMed ID
nsv1059146 CNV gain 25217958
nsv1078306 OTHER inversion 25765185
nsv953852 CNV deletion 24416366

Variation tolerance for NATD1 Gene

Gene Damage Index Score: 3.01; 49.97% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for NATD1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for NATD1 Gene

Disorders for NATD1 Gene

Relevant External Links for NATD1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for NATD1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NATD1 Gene

Publications for NATD1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 65
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 65
  3. Next-generation sequencing to generate interactome datasets. (PMID: 21516116) Yu H. … Vidal M. (Nat. Methods 2011) 3 65
  4. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 4 65
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 65

Products for NATD1 Gene

Sources for NATD1 Gene