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NAT9 Gene

protein-coding   GIFtS: 55
GCID: GC17M072766

N-Acetyltransferase 9 (GCN5-Related, Putative)

(Previous name: N-acetyltransferase 9)
  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
N-Acetyltransferase 9 (GCN5-Related, Putative)1 2     Embryo Brain Specific Protein2
N-Acetyltransferase 91 2     EBS3
Embryo Brain-Specific Protein2 3     EC 2.3.1.-3
EBSP, HNATL2     

External Ids:    HGNC: 231331   Entrez Gene: 261512   Ensembl: ENSG000001090657   UniProtKB: Q9BTE03   
ORGUL members:         

Export aliases for NAT9 gene to outside databases

Previous GC identifers: GC17M070279 GC17M068177


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for NAT9 Gene:
NAT9 (N-acetyltransferase 9 (GCN5-related, putative)) is a protein-coding gene. Diseases associated with NAT9 include psoriatic arthritis, and atopic dermatitis. GO annotations related to this gene include N-acetyltransferase activity.

Gene Wiki entry for NAT9 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence:
NC_000017.11  NT_010783.16  NC_018928.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the NAT9 gene promoter:
         Max1   POU2F1   RREB-1   GCNF-1   GCNF   POU2F1a   GCNF-2   GATA-2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidNAT9 promoter sequence
   Search Chromatin IP Primers for NAT9

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat NAT9


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 17q25.1   Ensembl cytogenetic band:  17q25.1   HGNC cytogenetic band: 17q25.2

NAT9 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
NAT9 gene location

GeneLoc information about chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17M072766:  view genomic region     (about GC identifiers)

Start:
72,766,686 bp from pter      End:
72,772,506 bp from pter
Size:
5,821 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: NAT9_HUMAN, Q9BTE0 (See protein sequence)
Recommended Name: N-acetyltransferase 9  
Size: 207 amino acids; 23361 Da
Secondary accessions: B2R7F0 Q9BTD0 Q9Y3T3
Alternative splicing: 2 isoforms:  Q9BTE0-1   Q9BTE0-2   

Explore the universe of human proteins at neXtProt for NAT9: NX_Q9BTE0

Explore proteomics data for NAT9 at MOPED

Post-translational modifications: 

  • Ubiquitination2 at Lys33, Lys118
  • Modification sites at PhosphoSitePlus

  • See NAT9 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_056469.2  
    ENSEMBL proteins: 
     ENSP00000350467   ENSP00000462019   ENSP00000463824   ENSP00000463523   ENSP00000464281  
     ENSP00000464681   ENSP00000462835   ENSP00000462454   ENSP00000462120   ENSP00000463353  
     ENSP00000464142   ENSP00000463760   ENSP00000463860   ENSP00000464505  

    NAT9 Human Recombinant Protein Products:

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    OriGene Protein Over-expression Lysate for NAT9
    OriGene Custom MassSpec
    OriGene Custom Protein Services for NAT9
    GenScript Custom Purified and Recombinant Proteins Services for NAT9
    Novus Biologicals NAT9 Protein
    Novus Biologicals NAT9 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for NAT9

    NAT9 Antibody Products:

    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
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    Browse OriGene Antibodies
    OriGene Custom Antibody Services for NAT9
    Novus Biologicals NAT9 Antibodies
    Abcam antibodies for NAT9
    Cloud-Clone Corp. Antibodies for NAT9
    Search ThermoFisher Antibodies for NAT9
    LSBio Antibodies in human, mouse, rat for NAT9

    NAT9 Assay Products:

    Browse Kits and Assays available from EMD Millipore
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    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for NAT9
    Browse Enzo Life Sciences for kits & assays
    Cloud-Clone Corp. ELISAs for NAT9
    Cloud-Clone Corp. CLIAs for NAT9


    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    2 InterPro protein domains:
     IPR000182 GNAT_dom
     IPR016181 Acyl_CoA_acyltransferase

    Graphical View of Domain Structure for InterPro Entry Q9BTE0

    ProtoNet protein and cluster: Q9BTE0

    1 Blocks protein domain: IPB000182 GCN5-related N-acetyltransferase

    UniProtKB/Swiss-Prot: NAT9_HUMAN, Q9BTE0
    Similarity: Belongs to the acetyltransferase family. GNAT subfamily
    Similarity: Contains 1 N-acetyltransferase domain


    NAT9 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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         Enzyme Number (IUBMB): EC 2.3.1.-1

         Gene Ontology (GO): 2 molecular function terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0008080N-acetyltransferase activity IEA--
    GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups ----
         
    NAT9 for ontologies           About GeneDecksing


    Phenotypes:
         1 MGI phenotypic allele for Nat9 (no phenotypes)

    NAT9 for phenotypes           About GeneDecksing

    Animal Models:
         MGI mouse knock-out Nat9tm1Lex for NAT9

       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for NAT9
       inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for NAT9

       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for NAT9
       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for NAT9

    miRNA
    Products:
        
    miRTarBase miRNAs that target NAT9:
    hsa-mir-103a-2-5p (MIRT035765)

    Block miRNA regulation of human, mouse, rat NAT9 using miScript Target Protectors
    Selected qRT-PCR Assays for microRNAs that regulate NAT9 (see all 12):
    hsa-miR-550a hsa-miR-324-3p hsa-miR-1224-3p hsa-miR-516b* hsa-miR-1301 hsa-miR-181a-2* hsa-miR-764 hsa-miR-1205
    SwitchGear 3'UTR luciferase reporter plasmidNAT9 3' UTR sequence
    Inhib. RNA
    Products:
        
    OriGene RNAi products in human, mouse, rat for NAT9
    Predesigned siRNA for gene silencing in human, mouse, rat NAT9

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for NAT9

    Clone
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    OriGene clones in human, mouse for NAT9 (see all 6)
    OriGene ORF clones in mouse, rat for NAT9
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: NAT9 (NM_015654)
    Sino Biological Human cDNA Clone for NAT9
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for NAT9
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NAT9

    Cell Line
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    GenScript Custom overexpressing Cell Line Services for NAT9
    Browse ESI BIO Cell Lines and PureStem Progenitors for NAT9 
    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NAT9


    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    mitochondrion2
    cytosol1
    extracellular1
    nucleus1
    peroxisome1

    Gene Ontology (GO): 1 cellular component term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0043234protein complex IDA--

    NAT9 for ontologies           About GeneDecksing


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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    SuperPaths for NAT9 About    
    See pathways by source

    SuperPathContained pathways About
    1Biological oxidations
    metapathway biotransformation0.42


    1 BioSystems Pathway for NAT9
        metapathway biotransformation



        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for NAT9
    Interactions:

        Search GeneGlobe Interaction Network for NAT9

    STRING Interaction Network Preview (showing 5 interactants - click image to see 7)

    Selected Interacting proteins for NAT9 (Q9BTE02, 3 ENSP000003504674) via UniProtKB, MINT, STRING, and/or I2D (see all 24)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    C7orf55-LUC7L2Q9Y3832, 3MINT-65332 I2D: score=5 
    LUC7L2Q9Y3832, 3MINT-65332 I2D: score=5 
    C14orf1Q9UKR52, 3MINT-65331 I2D: score=5 
    CRMP1Q141942, 3MINT-65329 I2D: score=5 
    KIAA1377Q9P2H02, 3MINT-65330 I2D: score=5 
    About this table

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for NAT9



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, and/or QIAGEN )
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    REFSEQ mRNAs for NAT9 gene: 
    NM_015654.3  

    Unigene Cluster for NAT9:

    N-acetyltransferase 9 (GCN5-related, putative)
    Hs.144058  [show with all ESTs]
    Unigene Representative Sequence: AK123115
    Selected Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 29):
    ENST00000357814(uc002jlq.3 uc002jlr.3) ENST00000580301 ENST00000583834
    ENST00000581136 ENST00000580632 ENST00000581762 ENST00000582870 ENST00000584022
    ENST00000578822 ENST00000583757 ENST00000582524 ENST00000583476 ENST00000579218
    ENST00000578798 ENST00000578862 ENST00000580216 ENST00000583989 ENST00000581466

    miRNA
    Products:
         
    Block miRNA regulation of human, mouse, rat NAT9 using miScript Target Protectors
    Selected qRT-PCR Assays for microRNAs that regulate NAT9 (see all 12):
    hsa-miR-550a hsa-miR-324-3p hsa-miR-1224-3p hsa-miR-516b* hsa-miR-1301 hsa-miR-181a-2* hsa-miR-764 hsa-miR-1205
    SwitchGear 3'UTR luciferase reporter plasmidNAT9 3' UTR sequence
    Inhib. RNA
    Products:
         
    OriGene RNAi products in human, mouse, rat for NAT9
    Predesigned siRNA for gene silencing in human, mouse, rat NAT9
    Clone
    Products:
         
    OriGene clones in human, mouse for NAT9 (see all 6)
    OriGene ORF clones in mouse, rat for NAT9
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: NAT9 (NM_015654)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for NAT9
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat NAT9
    Primer
    Products:
        
    OriGene qPCR primer pairs and template standards for NAT9
    OriGene qSTAR qPCR primer pairs in human, mouse for NAT9
    Pre-validated RT2 qPCR Primer Assay in human, mouse / rat NAT9
      QuantiTect SYBR Green Assays in human, mouse, rat NAT9
      QuantiFast Probe-based Assays in human, mouse, rat NAT9

    Additional mRNA sequence: 

    AK123115.1 AK225602.1 AK308569.1 AK312958.1 AL050269.1 AY632082.1 BC004195.2 BC004225.2 

    20 DOTS entries:

    DT.431235  DT.95268536  DT.101984087  DT.97845483  DT.100877625  DT.100877627  DT.92431441  DT.120974535 
    DT.100877613  DT.95204300  DT.100877620  DT.100877626  DT.92431440  DT.92431442  DT.100728971  DT.120974543 
    DT.120974557  DT.120974560  DT.40130119  DT.95173975 

    Selected AceView cDNA sequences (see all 187):

    BG116888 BM544236 AL524302 AW008425 BM909550 BE646512 BI834661 AA357633 
    AV726297 CR598253 CF453691 BM972823 BP356674 BI907688 CB997391 BC004195 
    AI858498 CB123661 CR619487 AL558792 BE871454 BM974361 CB995674 BI821280 

    GeneLoc Exon Structure

    Selected Alternative Splicing Database (ASD) splice patterns (SP) for NAT9 (see all 38)    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b · 3c · 3d ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c · 6d ^ 7a · 7b · 7c · 7d · 7e ^ 8 ^ 9 ^ 10a · 10b · 10c ^
    SP1:                          -     -           -     -     -     -     -           -     -     -                 -     -     -     -     -     -     -     -   
    SP2:                          -     -           -     -     -     -     -           -     -     -                 -     -     -     -     -     -     -     -   
    SP3:                          -     -           -     -     -     -     -           -     -     -                 -     -     -     -     -     -     -     -   
    SP4:                          -     -           -     -     -     -     -           -     -     -                 -     -     -     -     -     -     -     -   
    SP5:                          -     -           -     -     -     -     -           -     -     -                 -     -     -     -     -     -     -     -   

    ExUns: 11a · 11b · 11c · 11d · 11e ^ 12a · 12b · 12c · 12d · 12e · 12f · 12g ^ 13a · 13b · 13c · 13d · 13e · 13f · 13g · 13h · 13i · 13j · 13k · 13l
    SP1:                    -     -     -                                   -                                                                           
    SP2:                    -     -     -                                   -                                                                           
    SP3:                    -     -     -     -                             -                                                                           
    SP4:                    -     -     -                                   -                                                                           
    SP5:                    -     -     -     -     -     -     -     -     -     -                                                                     


    ECgene alternative splicing isoforms for NAT9

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    NAT9 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: CCTCAGTATA
    NAT9 Expression
    About this image

    NAT9 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    NAT9 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.144058
        Custom PCR Arrays for NAT9
    Primer
    Products:
    OriGene qPCR primer pairs and template standards for NAT9
    OriGene qSTAR qPCR primer pairs in human, mouse for NAT9
    Pre-validated RT2 qPCR Primer Assay in human, mouse / rat NAT9
    QuantiTect SYBR Green Assays in human, mouse, rat NAT9
    QuantiFast Probe-based Assays in human, mouse, rat NAT9
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NAT9

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of eukaryotes.

    Orthologs for NAT9 gene from Selected species (see all 17)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Nat91 , 5 N-acetyltransferase 9 (GCN5-related, putative)1, 5 85.2(n)1
    82.44(a)1
      11 (80.68 cM)5
    661761  NM_025400.31  NP_079676.11 
     1151828325 
    chicken
    (Gallus gallus)
    Aves NAT91 N-acetyltransferase 9 (GCN5-related, putative) 73.77(n)
    73.1(a)
      422109  XM_004946352.1  XP_004946409.1 
    lizard
    (Anolis carolinensis)
    Reptilia NAT96
    N-acetyltransferase 9 (GCN5-related, putative)
    64(a)
    1 ↔ 1
    2(115719154-115728345)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia nat91 N-acetyltransferase 9 (GCN5-related, putative) 67.91(n)
    68.62(a)
      100495076  XM_004918480.1  XP_004918537.1 
    zebrafish
    (Danio rerio)
    Actinopterygii LOC1000048261 n-acetyltransferase 9-like 63.28(n)
    57.87(a)
      100004826  XM_001343993.4  XP_001344029.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG115391 CG11539 54.32(n)
    50.26(a)
      43726  NM_143620.2  NP_651877.1 
    worm
    (Caenorhabditis elegans)
    Secernentea Y67D2.51 Y67D2.5 52.11(n)
    45.26(a)
      190511  NM_065017.2  NP_497418.2 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT2G048451 AT2G04845 55.97(n)
    49.73(a)
      815030  NM_126516.2  NP_565315.1 


    ENSEMBL Gene Tree for NAT9 (if available)
    TreeFam Gene Tree for NAT9 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section

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      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for NAT9 (see all 133)    About this table    
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 17 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1855443571,2
    --72766198(+) AGGAAA/GGTGGC 1 -- int10--------
    rs1156673291,2
    C,F--72766237(+) GGTTCC/TGGGCA 1 -- int11Minor allele frequency- T:0.04WA 118
    rs8956921,2
    C,F,A,H--72766252(-) TTCCTC/TCTGAG 1 -- int113Minor allele frequency- T:0.40NA EA NS CSA WA 975
    rs8956911,2
    C,F,O,A,H--72766300(-) TCTGAG/TAGGTG 1 -- int125Minor allele frequency- N:0.00EA NA NS WA 2962
    rs126026371,2
    C,F,H--72766408(+) CTGCTC/GCTTGT 1 -- int13Minor allele frequency- G:0.10NA EA 244
    rs1122642531,2
    C,F--72766527(+) GGGTCG/ATGGAG 1 -- int12Minor allele frequency- A:0.07CSA WA 120
    rs1907513431,2
    --72766550(+) TCTCAC/TCTGCT 1 -- int10--------
    rs1807859681,2
    --72766572(+) CCCTGA/GGGGAC 1 -- int10--------
    rs1386773861,2
    --72766689(+) CGTTCA/GTTTTA 1 -- ut310--------
    rs1849505401,2
    --72766691(+) TTCGTG/TTTATA 1 -- ut310--------

    HapMap Linkage Disequilibrium report for NAT9 (72766686 - 72772506 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 1 variation for NAT9:    About this table    
    Variant IDTypeSubtypePubMed ID
    nsv908743CNV Loss21882294

    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing NAT9
    DNA2.0 Custom Variant and Variant Library Synthesis for NAT9

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    6 diseases for NAT9:    
    About MalaCards
    psoriatic arthritis    atopic dermatitis    crohn's disease    dermatitis
    psoriasis    arthritis


    NAT9 for disorders           About GeneDecksing

    Genetic Association Database (GAD): NAT9
    Human Genome Epidemiology (HuGE) Navigator: NAT9 (1 document)

    Export disorders for NAT9 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for NAT9 gene, integrated from 10 sources (see all 23):
    (articles sorted by number of sources associating them with NAT9)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Novel loci, including those related to Crohn disease, psoriasis, and inflammation, identified in a genome-wide association study of fibrinogen in 17 686 women: the Women's Genome Health Study. (PubMed id 20031577)1, 4 Danik J.S....Ridker P.M. (Circ Cardiovasc Genet 2009)
    2. A putative RUNX1 binding site variant between SLC9A3R1 and NAT9 is associated with susceptibility to psoriasis. (PubMed id 14608357)1, 3 Helms C....Bowcock A.M. (Nat. Genet. 2003)
    3. Pathway Analysis of ChIP-Seq-Based NRF1 Target Genes Suggests a Logical Hypothesis of their Involvement in the Pathogenesis of Neurodegenerative Diseases. (PubMed id 24250222)1 Satoh J....Yamamoto Y. (Gene Regul Syst Bio 2013)
    4. A directed protein interaction network for investigating intracellular signal transduction. (PubMed id 21900206)1 Vinayagam A....Wanker E.E. (Sci Signal 2011)
    5. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (Mol. Cell 2011)
    6. Global identification of modular cullin-RING ligase substrates. (PubMed id 21963094)1 Emanuele M.J....Elledge S.J. (Cell 2011)
    7. Investigation of association of genes NAT9, SLC9A3R1 and RAPTOR on chromosome 17q25 with psoriatic arthritis. (PubMed id 19139211)1 Filer C.E....Barton A. (Ann. Rheum. Dis. 2009)
    8. An empirical framework for binary interactome mapping. (PubMed id 19060904)1 Venkatesan K....Vidal M. (Nat. Methods 2009)
    9. The full-ORF clone resource of the German cDNA consortium. (PubMed id 17974005)2 Bechtel S.... Schupp I. (BMC Genomics 2007)
    10. [Cloning and expression analysis of human N-acetyltransferase doman containing gene hNATL]. (PubMed id 16944568)1 Zou X....Li Y.P. (Fen Zi Xi Bao Sheng Wu Xue Bao 2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section

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    Entrez Gene: 26151 HGNC: 23133 AceView: EBSP Ensembl:ENSG00000109065 euGenes: HUgn26151
    ECgene: NAT9 H-InvDB: NAT9

    (According to HUGE)
    About This Section

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      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
    About This Section

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    NameDescription
    PharmGKB entry for NAT9 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section

    TryGeneCards Plus
    Patent Information for NAT9 gene:
    Search GeneIP for patents involving NAT9

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, and ESI BIO, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
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    GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014

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