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NAT5 Gene

protein-coding   GIFtS: 56

GC20P019945
N-acetyltransferase 5 (GCN5-related, putative)
(Previous names: N-acetyltransferase 5, ARD1 subunit (arrest-defective 1, S. cerevisiae, homolog), N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae), N-acetyltransferase 5 )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
EC 2.3.1.- 3
NAT3 1, 2, 5
OTTHUMP00000030374 2
dJ1002M8.1 1, 2
Descriptions
N-acetyltransferase 3 homolog 2
N-acetyltransferase 5 1, 2
N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) 1, 2
N-acetyltransferase 5 (GCN5-related, putative) 2
N-acetyltransferase 5, ARD1 subunit (arrest-defective 1, S.
cerevisiae, homolog) 1, 2
N-terminal acetyltransferase complex ARD1 subunit 2
dJ1002M8.1 (N-terminal acetyltransferase complex ard1
subunit) 2
dJ1175I6.2 (N-terminal acetyltransferase complex ard1
subunit) 2
External Ids
HGNC: 159081
Entrez Gene: 511262
UniProtKB: P615993
Ensembl: ENSG000001734187
Search outside databases for aliases for NAT5 gene

Previous GC identifers: GC20P019986 GC20P019992

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for NAT5:
NAT5 is a component of N-acetyltransferase complex B (NatB). Human NatB performs cotranslational
N(alpha)-terminal acetylation of methionine residues when they are followed by asparagine
(Starheim et al., 2008 [PubMed 18570629]).[supplied by OMIM]

UniProtKB/Swiss-Prot: NAT5_HUMAN, P61599
Function: Seems to be involved in N-acetylation (By similarity)

Gene Wiki entry for NAT5

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the NAT5 gene  

Entrez Gene cytogenetic band: 20p11.23   Ensembl cytogenetic band:  20p11.23   HGNC cytogenetic band: 20p11.23

NAT5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20P019945:     (about GC identifiers)

Start:
19,945,937 bp from pter
End:
19,962,269 bp from pter
Size:
16,333 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000020.9  NT_011387.8  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: NAT5_HUMAN, P61599 (See protein sequence)
Recommended Name: N-acetyltransferase 5  
Size: 178 amino acids; 20368 Da
Secondary accessions: Q5TFT7 Q9D7H8 Q9H0Y4 Q9NQH6 Q9Y6D2

REFSEQ proteins (3 alternative transcripts): 
NP_057184.1  NP_852668.1  NP_852669.1  


ENSEMBL proteins: 
ENSP00000311027 ENSP00000335636 ENSP00000381603 


Human Recombinant Proteins 
Browse Drug Discovery Central at Invitrogen for human recombinant proteins
Browse Purified and Recombinant Proteins at Millipore
Browse Human Recombinant Proteins at Sigma-Aldrich  
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
Recombinant Proteins from Abcam (N acetyl transferase 5)
Human Recombinant Proteins from Abnova (NAT5)
              OriGene Purified Recombinant Human Protein: NAT5 

1 Gene Ontology (GO) cellular component term (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0005622 intracellular IDA11256614
About this table

Antibodies for NAT5: 
Browse Antibodies Central at Invitrogen
Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
Sigma-Aldrich Antibodies for NAT5
Browse R&D Systems for Antibodies
Antibodies from Abcam (N acetyl transferase 5), each with their AbpromiseSM
Monoclonal and Polyclonal Antibodies from Abnova (NAT5)
Novus Biologicals Antibodies for NAT5

Assays for NAT5: 
Browse Invitrogen for biochemical assays
Browse Kits and Assays available from Millipore
Browse R&D Systems for biochemical assays
Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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2 InterPro domains/families:
 IPR000182 GCN5-rel_AcTrfase
 IPR016181 Acyl_CoA_acyltransferase


   GeneDecks  NAT5 for the domains selected above  
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Graphical View of Domain Structure for InterPro Entry P61599

ProtoNet protein and cluster: P61599

UniProtKB/Swiss-Prot: NAT5_HUMAN, P61599
Similarity: Belongs to the acetyltransferase family. ARD1 subfamily
Similarity: Contains 1 N-acetyltransferase domain

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
About This Section

Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (NAT5)
Browse for Gene Knock-down Tools from Millipore
Abnova Chimera RNAi Products for Gene knock-down (NAT5)
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_181527

              Applied Biosystems Silencer® siRNAs for NAT5

              Sigma-Aldrich siRNA for NAT5  
                     Sigma-Aldrich shRNA for NAT5  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Clones:Invitrogen Clones for NAT5
Browse Clones for the Expression of Recombinant Proteins Available from Millipore
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3): NM_016100
                                 Myc/DDK tagged cDNA clones in CMV expression vector (see all 3): NM_016100
                                 untagged cDNA clones in CMV expression vector (see all 3): NM_016100 

Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
              OriGene genome-wide validated SYBR primer pairs: NM_016100

UniProtKB/Swiss-Prot: NAT5_HUMAN, P61599
Function: Seems to be involved in N-acetylation (By similarity)
Enzyme Number (IUBMB): EC 2.3.1.- 

1 MGI phenotypic allele for Nat5 (no phenotypes)


3 Gene Ontology (GO) molecular function terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0008080 N-acetyltransferase activity IEA--
GO:0008415 acyltransferase activity IEA--
GO:0016740 transferase activity IEA--
About this table

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
About This Section


5/6 Kegg Pathways  (Kegg details for NAT5) (see all 6 ):
 hsa00350 Tyrosine metabolism
 hsa00360 Phenylalanine metabolism
 hsa00564 Glycerophospholipid metabolism
 hsa00624 1- and 2-Methylnaphthalene degradation
 hsa00632 Benzoate degradation via CoA ligation

   GeneDecks  NAT5 for the pathways selected above  
About GeneDecksing

5/22 Interacting proteins for NAT5 (ENSP000003356363) via UniProtKB, MINT, and/or STRING (see all 22 )
InteractantInteraction Details
GeneCardExternal ID(s)
MYST3ENSP000002657133STRING (score=.91)
ESCO1ENSP000002692143STRING (score=.908)
ESCO2ENSP000003069993STRING (score=.905)
MYST4ENSP000002872393STRING (score=.9)
ACOT11ENSP000003603663STRING (score=.899)
About this table

1 Gene Ontology (GO) biological process term (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0008152 metabolic process IEA--
About this table
(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Browse drugs & compounds from Enzo Life Sciences
Browse Small Molecules at Sigma-Aldrich

Browse Tocris compounds for NAT5

(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (NAT5)
Browse for Gene Knock-down Tools from Millipore
Abnova Chimera RNAi Products for Gene knock-down (NAT5)
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_181527

              Sigma-Aldrich siRNA for NAT5  
                     Sigma-Aldrich shRNA for NAT5  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Applied Biosystems Silencer® siRNAs: 

NM_016100  NM_181527  NM_181528  

REFSEQ mRNAs for NAT5 gene (3 alternative transcripts): 

NM_016100.3   NM_181527.2   NM_181528.2   

Applied Biosystems TaqMan ® Gene Expression Assays: 

NM_016100  NM_181527  NM_181528  

               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3): NM_016100
                                 Myc/DDK tagged cDNA clones in CMV expression vector (see all 3): NM_016100
                                 untagged cDNA clones in CMV expression vector (see all 3): NM_016100 

Additional cDNA sequence: 

AF085355.1 AK311819.1 AL136641.1 BC005181.1 BC008446.1 CR597980.1 CR607693.1 CR609257.1 
CR623548.1 

14 DOTS entries:

DT.445120  DT.100698567  DT.97768901  DT.100021147  DT.91823036  DT.99971912  DT.100746561  DT.120826149 
DT.40121431  DT.100819175  DT.40266449  DT.92437400  DT.95182041  DT.97847480 

24/328 AceView cDNA sequences (see all 328 ):

AI005502 AI005357 BM764866 CR597980 AA262762 BU852320 BU072576 AI138684 
CA774784 BU752497 CF126363 BG654562 CA448252 CA748675 H25087 CB306744 
BC005181 AA885618 AI469305 AI222812 AA759323 BI488948 BQ437822 CA429816 

highest scoring ESTs for NAT5:

AA203679 AI564452 AA047256 AA057141 AA181083 AA215784 AA292294 AA314886 AA316456 AA325036 

Unigene Cluster for NAT5:

N-acetyltransferase 5 (GCN5-related, putative)
Hs.368783  [show with all ESTs]
Unigene Representative Sequence: CR607693


GeneLoc Exon Structure

4 Alternative Splicing Database (ASD) splice patterns (SP) for NAT5

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b
SP1:                                                      
SP2:                                      -               
SP3:        -     -                                       
SP4:                                                      

About this scheme

ECgene alternative splicing isoforms for NAT5

3 Ensembl transcripts including schematic representations:
ENST00000310450  ENST00000334982  ENST00000398602  
(Experimental results according to 1GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
About This Section

NAT5 expression in normal and diseased human tissues

 Applied Biosystems TaqMan ® Gene Expression Assays for NAT5

1 / 2 / 3

4 probe-sets matching NAT5 gene


Affymetrix
probe-set
Array  GeneAnnot data GeneNote data GeneTide data
# genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

91697_at2, 3 U95-E 1 1.00 1.00 0.71 1.08 AI564452 1.00 1.00 1.00 1
48840_s_at2, 3 U95-C 1 1.00 1.00 0.96 0.92 AA203679 1.00 1.00 1.00 1

223040_at2, 3 U133-B 1 1.00 1.00 -- -- BC005181 0.80 1.00 0.91 1

223040_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
GeneDecks  NAT5 for binary patterns associated with the probe-sets selected above  
About GeneDecksing
About this table    
Data from (Publications) and GNF BioGPS
    About these images
About these images

CGAP SAGE TAG: GTTCATAGTA

SOURCE GeneReport for Unigene cluster: Hs.368783
(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section


Orthologs for NAT5 gene from 5/22 species (see all 22 )
Organism Gene Locus Description Human
Similarity
NCBI accessions
dog
(Canis familiaris)
NAT51   -- N-acetyltransferase 5 (GCN5-related, putative) 93.63(n)
99.44(a)
477138  XM_534329.2  XP_534329.2 
chimpanzee
(Pan troglodytes)
NAT51   -- N-acetyltransferase 5 (GCN5-related, putative) 99.63(n)
100(a)
458124  XM_514540.2  XP_514540.2 
cow
(Bos taurus)
NAT51   -- N-acetyltransferase 5 (GCN5-related, putative) 91.01(n)
100(a)
540212  XM_592318.3  XP_592318.3 
rat
(Rattus norvegicus)
Nat51   -- N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) 91.2(n)
99.44(a)
362228  XM_342534.3  XP_342535.2 
mouse
(Mus musculus)
Nat51, 5 2 (82.00 cM)5
N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae)1, 5 91.01(n)1
99.44(a)1
678771  NM_026425.21  NP_080701.11 
 AA1076515  AI8473435  (see all 17)
About this table        Species with no ortholog for NAT5

ENSEMBL Gene Tree for NAT5
(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section

Paralogs for NAT5 gene
ARD1B2  ARD1A2  

(According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
About This Section


10/120 NCBI SNPs in NAT5 are shown (see all 120 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 81)
ABGenomic DataTranscription DataAllele Frequencies
SNP IDValidChr 20 posSequenceRecsAA
Chg
TypeMoreRecsAllele
freq
PopTotal
sample
More
------------
rs60355131,2
A,C,F,H19944058(+) ACGTTC/TCCCTG 2 -- ng511Minor allele frequency- T:0.03EU 120
--
rs60465381,2
A,C,F19944142(+) GTATCA/GGTGCT 2 -- ng514Minor allele frequency- N:0.00EA NA 188
--
rs1995391,2
A,C19944712(+) tcttgC/Gtgtgt 3 -- ng510--------
rs61369181,2
H19961915(+) TATTAG/AGAGAA 3 -- ut31 trp34Minor allele frequency- A:0.00EU EA WA 420
rs61369191,2
H19961935(+) TTTTAG/AGTCTT 3 -- ut314Minor allele frequency- A:0.00EU EA WA 420
rs60465441,2
H19955445(+) CAGAAG/AGCTCA 3 S/G mis1 ese34Minor allele frequency- A:0.00EU EA WA 420
--
rs130416751,2
A19945101(+) acattC/Tctttt 3 -- ng51 trp30--------
rs72631,2
A,C,F,H19954368(+) GAGTAT/CTTCAT 3 Y/Y syn19Minor allele frequency- C:0.12EA EU WA NA 1364
rs60355211,2
H19954339(+) TCTACC/TTACAA 3 L/L syn1 ese34Minor allele frequency- T:0.00EU EA WA 420
rs2001771,2
A,C,F,H19955325(+) ACTTCG/TTTATT 3 -- int111Minor allele frequency- T:0.27EA NA EU WA 864
About this table

HapMap Linkage Disequilibrium images for NAT5 (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
About This Section

OMIM: 610833

(Possibly Related Articles in Doctor's Guide)
About This Section

  --

(in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
About This Section

10/21 PubMed articles for NAT5 gene (see all 21 ):
(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)
(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
About This Section

Entrez Gene: 51126 HGNC: 15908 AceView: NAT5 Ensembl:ENSG00000173418 euGenes: HUgn51126
ECgene: NAT5 H-InvDB: NAT5
(According to HUGE)
About This Section

  --
(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

  --
(Available from WIS Yeda, Salk, Tufts)
About This Section

  --
(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section



Products for NAT5:
 TaqMan ® Gene Expression Assays
 TaqMan ® Genotyping Assays
  Free SNP selection tool



  Invitrogen iPath Pathways  Invitrogen BLOCK-iT™ RNAi
  Invitrogen Antibodies  Invitrogen Assays
  Invitrogen Clones  Invitrogen Q-PCR Products
  Invitrogen Human Recombinant Kinases  Invitrogen Custom Antibody and Peptide Service
  Invitrogen Proteins / Assays / Screening Services  Search Invitrogen catalog for NAT5-related products

 Millipore Custom Antibody & Bulk Services
 Millipore Preclinical / Clinical Development Services
 Millipore Immunoassay Services
 Millipore Target Screening & Profiling Services


 Predesigned and custom siRNAs for NAT5 Antibodies for NAT5
 Explore super-pooled esiRNAs Browse proteins at Sigma-Aldrich
 Lentivirus-delivered shRNAs for NAT5 Browse small molecules at Sigma-Aldrich
 "Your Favorite Gene" Pathwaysfeedback


  
 Antibodies   Primer Pairs  
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 Recombinant & Natural Proteins  

 Recombinant Proteins (NAT5)
 Antibodies (NAT5)
 Chimera RNAi (NAT5)
 Custom Service for Mouse Mab
 Custom Service for Rabbit Pab from Full-length Protein
  
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 Recombinant Proteins
(N acetyl transferase 5)
 Antibodies (N acetyl transferase 5)
 Tagged/untagged cDNA clones
 Validated SYBR primer pairs
 Purified proteins from HEK293T cells
 Western blot validated antibodies
 shRNA in GFP-retroviral vector
 Search Tocris compounds for NAT5




 Search www.enzolifesicences.com for proteins, assays, substrates, inhibitors & antibodies
 Antibodies for NAT5

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