NAT5 Gene
protein-coding GIFtS : 56
GC20P019945
N-acetyltransferase 5 (GCN5-related, putative) (Previous names: N-acetyltransferase 5, ARD1 subunit (arrest-defective 1, S. cerevisiae, homolog), N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae), N-acetyltransferase 5 )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
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Aliases & Descriptions for NAT5
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 2.3.1.- 3 NAT3 1 , 2 , 5 OTTHUMP00000030374 2 dJ1002M8.1 1 , 2
Descriptions N-acetyltransferase 3 homolog 2 N-acetyltransferase 5 1 , 2 N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) 1 , 2 N-acetyltransferase 5 (GCN5-related, putative) 2 N-acetyltransferase 5, ARD1 subunit (arrest-defective 1, S. cerevisiae, homolog) 1 , 2 N-terminal acetyltransferase complex ARD1 subunit 2 dJ1002M8.1 (N-terminal acetyltransferase complex ard1 subunit) 2 dJ1175I6.2 (N-terminal acetyltransferase complex ard1 subunit) 2
Search outside databases for aliases for NAT5 genePrevious GC identifers: GC20P019986 GC20P019992
Summaries for NAT5 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for NAT5 : NAT5 is a component of N-acetyltransferase complex B (NatB). Human NatB performs cotranslationalN(alpha)-terminal acetylation of methionine residues when they are followed by asparagine(Starheim et al., 2008 [PubMed 18570629]).[supplied by OMIM] UniProtKB/Swiss-Prot: NAT5_HUMAN, P61599 Function : Seems to be involved in N-acetylation (By similarity)
Gene Wiki entry for NAT5
Genomic Location for NAT5
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the NAT5 gene Entrez Gene cytogenetic band: 20p11.23 Ensembl cytogenetic band: 20p11.23 HGNC cytogenetic band: 20p11.23 NAT5 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 20 GeneLoc Exon Structure
GeneLoc location for GC20P019945:
(about GC identifiers )
Start:
19,945,937 bp from pter
End:
19,962,269 bp from pter
Size:
16,333 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000020.9 NT_011387.8 Proteins for NAT5
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: NAT5_HUMAN, P61599 (See
protein sequence )Recommended Name: N-acetyltransferase 5 Size : 178 amino acids; 20368 Da
Secondary accessions : Q5TFT7 Q9D7H8 Q9H0Y4 Q9NQH6 Q9Y6D2
REFSEQ proteins (3 alternative transcripts):
NP_057184.1 NP_852668.1 NP_852669.1 ENSEMBL proteins: ENSP00000311027 ENSP00000335636 ENSP00000381603 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: NAT5 1 Gene Ontology (GO) cellular component term (links to tree view) :
About this table Antibodies for NAT5: Assays for NAT5:
Protein
Domains/ Families for NAT5(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P61599 ProtoNet protein and cluster: P61599
UniProtKB/Swiss-Prot: NAT5_HUMAN, P61599 Similarity : Belongs to the acetyltransferase family. ARD1 subfamilySimilarity : Contains 1 N-acetyltransferase domain
Gene Function for NAT5
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_181527 Applied Biosystems Silencer ® siRNAs for NAT5 Sigma-Aldrich siRNA for NAT5 Sigma-Aldrich shRNA for NAT5 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_016100                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_016100                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_016100  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_016100 UniProtKB/Swiss-Prot: NAT5_HUMAN, P61599 Function : Seems to be involved in N-acetylation (By similarity)Enzyme Number (IUBMB): EC 2.3.1.-
1 MGI phenotypic allele for Nat5 (no phenotypes)3 Gene Ontology (GO) molecular function terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0008080 N-acetyltransferase activity
IEA -- GO:0008415 acyltransferase activity
IEA -- GO:0016740 transferase activity
IEA --
About this table
Pathways & Interactions for NAT5
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/22 Interacting proteins for NAT5 (ENSP00000335636 3 ) via UniProtKB, MINT, and/or STRING (see all 22
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0008152 metabolic process
IEA --
About this table
Drugs & Compounds for NAT5 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for NAT5
Transcripts for NAT5(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_181527 Sigma-Aldrich siRNA for NAT5 Sigma-Aldrich shRNA for NAT5 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_016100 NM_181527 NM_181528
REFSEQ mRNAs for NAT5 gene (3 alternative transcripts): NM_016100.3 NM_181527.2 NM_181528.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_016100 NM_181527 NM_181528
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_016100                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_016100                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_016100  
Additional cDNA sequence: AF085355.1 AK311819.1 AL136641.1 BC005181.1 BC008446.1 CR597980.1 CR607693.1 CR609257.1 CR623548.1
14 DOTS entries : DT.445120 DT.100698567 DT.97768901 DT.100021147 DT.91823036 DT.99971912 DT.100746561 DT.120826149 DT.40121431 DT.100819175 DT.40266449 DT.92437400 DT.95182041 DT.97847480
24/328 AceView cDNA sequences (see all 328
):AI005502 AI005357 BM764866 CR597980 AA262762 BU852320 BU072576 AI138684 CA774784 BU752497 CF126363 BG654562 CA448252 CA748675 H25087 CB306744 BC005181 AA885618 AI469305 AI222812 AA759323 BI488948 BQ437822 CA429816
highest scoring ESTs for NAT5 :AA203679 AI564452 AA047256 AA057141 AA181083 AA215784 AA292294 AA314886 AA316456 AA325036
Unigene Cluster for NAT5: N-acetyltransferase 5 (GCN5-related, putative) Hs.368783 [show with all ESTs ] Unigene Representative Sequence: CR607693 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for NAT5 ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b SP1 :                   SP2 :             -       SP3 :   -   -               SP4 :                  
About this scheme ECgene alternative splicing isoforms for NAT5 3 Ensembl transcripts including schematic representations : ENST00000310450
ENST00000334982
ENST00000398602
Expression for NAT5
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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NAT5 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for NAT5 1 / 2 / 3
4 probe-sets matching NAT5 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GTTCATAGTASOURCE GeneReport for Unigene cluster: Hs.368783
Orthologs for NAT5
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for NAT5 gene from 5/22 species (see all 22
)
About this table Species with no ortholog for NAT5 ENSEMBL Gene Tree for NAT5 Paralogs for NAT5 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for NAT5 gene ARD1B 2 ARD1A 2
SNPs/Variants for NAT5 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for NAT5 (up to first 250kb)
Disorders & Mutations for NAT5
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 610833
Medical News for NAT5 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for NAT5 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/21 PubMed articles for NAT5 gene (see all 21
):
Search for NAT5
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing NAT5
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing NAT5
(According to HUGE )
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Specialized Databases showing NAT5 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for NAT5 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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