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Aliases for NASPP1 Gene

Aliases for NASPP1 Gene

  • Nuclear Autoantigenic Sperm Protein Pseudogene 1 2 3
  • AC022182.2 5

External Ids for NASPP1 Gene

Previous GeneCards Identifiers for NASPP1 Gene

  • GC08M061899
  • GC08M062012
  • GC08M061849

Summaries for NASPP1 Gene

GeneCards Summary for NASPP1 Gene

NASPP1 (Nuclear Autoantigenic Sperm Protein Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NASPP1 Gene

Genomics for NASPP1 Gene

Regulatory Elements for NASPP1 Gene

Enhancers for NASPP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F060942 1.3 Ensembl ENCODE 5.2 -8.3 -8268 10.9 HDGF PKNOX1 ATF1 ZNF133 ARID4B YY1 FOS MCM3 JUNB TBX21 NASPP1 CLVS1
GH08F060938 1 FANTOM5 Ensembl 0.8 +1.0 978 2.0 CTBP1 GATA3 ZNF680 PBX2 IKZF1 ZNF207 NASPP1 LOC105375938
GH08F060921 1.5 FANTOM5 Ensembl ENCODE 0.4 +13.8 13811 8.5 PKNOX1 TBL1XR1 WRNIP1 BMI1 RAD21 EGR1 ZNF207 ETV6 CREM CBFB CHD7 CLVS1 NASPP1 LOC105375938
GH08F060908 1.4 FANTOM5 ENCODE 0.3 +26.7 26717 10.3 HDGF PKNOX1 WRNIP1 SIN3A FEZF1 GLIS2 ELK1 ZNF143 ZNF207 KLF7 CHD7 ENSG00000254432 CLVS1 RAB2A LOC105375938 NASPP1
GH08F060960 1.2 Ensembl ENCODE 0.3 -21.3 -21342 1.4 ATF1 ARID4B THRB ZNF48 RAD21 DNMT3B RARA CREM MIXL1 THAP11 CLVS1 NASPP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NASPP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for NASPP1 Gene

Chromosome:
8
Start:
60,936,948 bp from pter
End:
60,939,978 bp from pter
Size:
3,031 bases
Orientation:
Minus strand

Genomic View for NASPP1 Gene

Genes around NASPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NASPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NASPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NASPP1 Gene

Proteins for NASPP1 Gene

Post-translational modifications for NASPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NASPP1 Gene

Domains & Families for NASPP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NASPP1 Gene

Function for NASPP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NASPP1 Gene

Localization for NASPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NASPP1 Gene

Pathways & Interactions for NASPP1 Gene

SuperPathways for NASPP1 Gene

No Data Available

Interacting Proteins for NASPP1 Gene

Gene Ontology (GO) - Biological Process for NASPP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NASPP1 Gene

Transcripts for NASPP1 Gene

mRNA/cDNA for NASPP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NASPP1 Gene

No ASD Table

Relevant External Links for NASPP1 Gene

GeneLoc Exon Structure for
NASPP1
ECgene alternative splicing isoforms for
NASPP1

Expression for NASPP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NASPP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of NASPP1 Gene:

NASPP1
genes like me logo Genes that share expression patterns with NASPP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NASPP1 Gene

Orthologs for NASPP1 Gene

Evolution for NASPP1 Gene

ENSEMBL:
Gene Tree for NASPP1 (if available)
TreeFam:
Gene Tree for NASPP1 (if available)

No data available for Orthologs for NASPP1 Gene

Paralogs for NASPP1 Gene

No data available for Paralogs for NASPP1 Gene

Variants for NASPP1 Gene

Relevant External Links for NASPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NASPP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NASPP1 Gene

Disorders for NASPP1 Gene

Relevant External Links for NASPP1

Genetic Association Database (GAD)
NASPP1

No disorders were found for NASPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NASPP1 Gene

Publications for NASPP1 Gene

  1. Comparison of mouse and human NASP genes and expression in human transformed and tumor cell lines. (PMID: 11674998) Richardson R.T. … O'Rand M.G. (Gene 2001) 2 3 64
  2. Genome-wide association study of lung function decline in adults with and without asthma. (PMID: 22424883) Imboden M. … Probst-Hensch N.M. (J. Allergy Clin. Immunol. 2012) 46 64
  3. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung H.C. … Singleton A. (Lancet Neurol 2006) 46 64

Products for NASPP1 Gene

Sources for NASPP1 Gene

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