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Aliases & Descriptions for NARG2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases BRCC1 1 , 2 , 3 FLJ11896 1 OTTHUMP00000163651 2
Descriptions NMDA receptor regulated 2 2 NMDA receptor-regulated gene 2 2 breast cancer cell 1 2
Search outside databases for aliases for NARG2 genePrevious GC identifers: GC15M058294 GC15M058431
Summaries for NARG2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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Genomic Location for NARG2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the NARG2 gene Entrez Gene cytogenetic band: 15q22.2 Ensembl cytogenetic band: 15q22.2 HGNC cytogenetic band: 15q22.2 NARG2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 15 GeneLoc Exon Structure
GeneLoc location for GC15M058502:
(about GC identifiers )
Start:
58,499,100 bp from pter
End:
58,558,636 bp from pter
Size:
59,537 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000015.8 NT_010194.16 Proteins for NARG2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: NARG2_HUMAN, Q659A1 (See
protein sequence )Recommended Name: NMDA receptor-regulated protein 2 Size : 982 amino acids; 110011 Da
Subcellular location : Nucleus (By similarity)
Developmental stage : Expressed in fetal brain, kidney, liver and lung
Sequence caution : Sequence=AAH20918.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence.Potential poly-A sequence;
Secondary accessions : Q05CT1 Q3B7W6 Q63HP4 Q658Q0 Q68CN8 Q6IPW7 Q6UX23 Q71H65 Q96CY5 Q9HAA2Alternative splicing : 3 isoforms : Q659A1-1 Q659A1-2 Q659A1-3
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001018099.1 NP_078887.2 ENSEMBL proteins: ENSP00000261520 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 1 Gene Ontology (GO) cellular component term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0005634 nucleus
IEA --
About this table Antibodies for NARG2: Assays for NARG2:
Protein
Domains/ Families for NARG2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q659A1 ProtoNet protein and cluster: Q659A1
Gene Function for NARG2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): BC020918 Applied Biosystems Silencer ® siRNAs for NARG2 Sigma-Aldrich siRNA for NARG2 Sigma-Aldrich shRNA for NARG2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001018089                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001018089                                  untagged cDNA clones in CMV expression vector (see all 3 ): BC020918  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_024611 Pathways & Interactions for NARG2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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3 Interacting proteins for NARG2 (ENSP00000261520 3 ) via UniProtKB, MINT, and/or STRING About this table
Drugs & Compounds for NARG2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for NARG2
Transcripts for NARG2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
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shRNA from
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OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): BC020918 Sigma-Aldrich siRNA for NARG2 Sigma-Aldrich shRNA for NARG2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001018089 NM_024611
REFSEQ mRNAs for NARG2 gene (2 alternative transcripts): NM_001018089.1 NM_024611.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001018089 NM_024611
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001018089                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001018089                                  untagged cDNA clones in CMV expression vector (see all 3 ): BC020918  
Additional cDNA sequence: AF502591.1 AK021958.1 AK055752.1 AK095389.1 AK127892.1 AL832046.1 AL833318.1 AY358546.1 BC013684.1 BC020918.1 BC071685.1 BC107427.1 BC140894.1 BC151844.1 BX647873.1 CR608429.1 CR612429.1 CR749852.1
20 DOTS entries : DT.100822158 DT.100729320 DT.40281265 DT.99978714 DT.121074890 DT.413740 DT.92421768 DT.121075020 DT.40132514 DT.70100757 DT.102825935 DT.92421766 DT.102825934 DT.121074816 DT.121074934 DT.40132513 DT.75143122 DT.91661641 DT.95158927 DT.202469
24/201 AceView cDNA sequences (see all 201
):CR612429 BU675087 AW241209 H75958 AI793057 AK095389 AI220201 BU621663 BG113848 AW673230 AA765247 AI657092 CA435435 AW090760 CR608429 AA811524 AA304986 AK127892 AI684821 AW075583 BX341810 AI698429 BG496916 CA773523
highest scoring ESTs for NARG2 :AA304986 AF502591 AI337917 AI680084 AI680099 AK055752 AK095389 AL832046 AY358546 BF184157
Unigene Cluster for NARG2: NMDA receptor regulated 2 Hs.200943 [show with all ESTs ] Unigene Representative Sequence: NM_024611 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for NARG2 (see all 7
) ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15 ^ 16 ^ 17 ^ 18 ^ 19a · 19b SP1 :       -   -       -                       -       -         SP2 :       -   -                             -       -         SP3 :       -                                             SP4 :     -   -   -                                           SP5 :                                                  
About this scheme ECgene alternative splicing isoforms for NARG2 1 Ensembl transcript including schematic representation : ENST00000261520
Expression for NARG2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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NARG2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for NARG2 1 / 2 / 3
12 probe-sets matching NARG2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GCAGGGAAATSOURCE GeneReport for Unigene cluster: Hs.200943 UniProtKB/Swiss-Prot: NARG2_HUMAN, Q659A1 Tissue specificity : Expressed at low levels in lung and testis
Orthologs for NARG2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for NARG2 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for NARG2 ENSEMBL Gene Tree for NARG2 Paralogs for NARG2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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SNPs/Variants for NARG2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for NARG2 (up to first 250kb)
Disorders & Mutations for NARG2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 610835
Medical News for NARG2 (Possibly Related Articles in
Doctor's Guide )
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Publications for NARG2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/11 PubMed articles for NARG2 gene (see all 11
):
Search for NARG2
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing NARG2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing NARG2
(According to HUGE )
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Specialized Databases showing NARG2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for NARG2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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