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Aliases for NAPA-AS1 Gene

Subcategory (RNA class) for NAPA-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for NAPA-AS1 Gene

  • NAPA Antisense RNA 1 2 3
  • NAPA Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NAPA-AS1 Gene

ORGUL Members for NAPA-AS1 Gene

Summaries for NAPA-AS1 Gene

GeneCards Summary for NAPA-AS1 Gene

NAPA-AS1 (NAPA Antisense RNA 1) is a RNA Gene, and belongs to lncRNA RNA class.

fRNAdb sequence ontologies for NAPA-AS1 Gene - the ORGUL cluster for this gene includes several descriptions:

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for NAPA-AS1 Gene

Genomics for NAPA-AS1 Gene

Genomic Location for NAPA-AS1 Gene

Start:
47,484,282 bp from pter
End:
47,501,597 bp from pter
Size:
17,316 bases
Orientation:
Plus strand

Genomic View for NAPA-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NAPA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NAPA-AS1 Gene

No data available for Regulatory Elements for NAPA-AS1 Gene

Proteins for NAPA-AS1 Gene

Post-translational modifications for NAPA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NAPA-AS1 Gene

Domains for NAPA-AS1 Gene

Gene Families for NAPA-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with NAPA-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for NAPA-AS1 Gene

Function for NAPA-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NAPA-AS1 Gene

Localization for NAPA-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for NAPA-AS1 Gene

Pathways for NAPA-AS1 Gene

SuperPathways for NAPA-AS1 Gene

No Data Available

Interacting Proteins for NAPA-AS1 Gene

Gene Ontology (GO) - Biological Process for NAPA-AS1 Gene

None

No data available for Pathways by source for NAPA-AS1 Gene

Transcripts for NAPA-AS1 Gene

mRNA/cDNA for NAPA-AS1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NAPA-AS1 Gene

NAPA antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NAPA-AS1 Gene

No ASD Table

Relevant External Links for NAPA-AS1 Gene

GeneLoc Exon Structure for
NAPA-AS1
ECgene alternative splicing isoforms for
NAPA-AS1

Expression for NAPA-AS1 Gene

mRNA expression in normal human tissues for NAPA-AS1 Gene

SOURCE GeneReport for Unigene cluster for NAPA-AS1 Gene Hs.657320

genes like me logo Genes that share expressions with NAPA-AS1: view

Orthologs for NAPA-AS1 Gene

Evolution for NAPA-AS1 Gene

ENSEMBL:
Gene Tree for NAPA-AS1 (if available)
TreeFam:
Gene Tree for NAPA-AS1 (if available)

No data available for Orthologs for NAPA-AS1 Gene

Paralogs for NAPA-AS1 Gene

No data available for Paralogs for NAPA-AS1 Gene

Variants for NAPA-AS1 Gene

Sequence variations from dbSNP and Humsavar for NAPA-AS1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs830150 -- 47,486,731(-) TTGAT(G/T)ACCAT intron-variant
rs78408200 -- 47,486,609(+) AGTCT(A/G)GATAC intron-variant
rs79835372 -- 47,486,608(+) AAGTC(C/T)GGATA intron-variant
rs114473793 -- 47,487,068(+) CACAT(C/T)GTGGA intron-variant
rs114627548 -- 47,486,424(+) GAGTG(C/T)GGCCC intron-variant

Relevant External Links for NAPA-AS1 Gene

HapMap Linkage Disequilibrium report
NAPA-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for NAPA-AS1 Gene

Disorders for NAPA-AS1 Gene

No disorders were found for NAPA-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for NAPA-AS1 Gene

Publications for NAPA-AS1 Gene

No publications were found for NAPA-AS1 Gene.

Products for NAPA-AS1 Gene

Sources for NAPA-AS1 Gene

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