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Aliases &
Descriptions
for NAP1L3
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases |
|---|
| BNAP 3 | | MB20 1, 2 | | MGC26312 1, 2 | | NPL3 1, 2 | | OTTHUMP00000023645 2 |
| | | Descriptions |
|---|
| nucleosome assembly protein 1-like 3 2 |
|
| |
Search outside databases for aliases for NAP1L3 genePrevious GC identifers: GC0XM088209 GC0XM089906 GC0XM090961 GC0XM091697 |
Summaries
for NAP1L3(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for NAP1L3:
This gene encodes a member of the nucleosome assembly protein (NAP) family. It is linked closely to
a region of genes responsible for several X-linked mental retardation syndromes. Alternatively
spliced transcript variants have been found for this gene, but the biological validity of the
variants has not been determined. [provided by RefSeq]
|
Genomic Location
for NAP1L3
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences)
About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
 Transcription factor binding sites upstream to the NAP1L3 gene 
Entrez Gene cytogenetic band: Xq21.3-q22 Ensembl cytogenetic band: Xq21.32 HGNC cytogenetic band: Xq21.3-q22NAP1L3 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome X GeneLoc Exon Structure GeneLoc location for GC0XM092732:
(about GC identifiers)
Start:
|
92,812,585 bp from pter |
End:
|
92,815,264 bp from pter |
Size:
|
2,680 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000023.9 NT_011651.16
| Proteins
for NAP1L3
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: NP1L3_HUMAN, Q99457 (See
protein sequence)Recommended Name: Nucleosome assembly protein 1-like 3 Size: 506 amino acids; 57593 Da
Subcellular location: Nucleus (By similarity)
Secondary accessions: B2RCM0 O60788REFSEQ proteins: NP_004529.2
ENSEMBL proteins: ENSP00000362171
Human Recombinant Proteins  OriGene Purified Recombinant Human Protein: NAP1L3
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for NAP1L3:
Assays for NAP1L3: | Protein
Domains/
Families
for NAP1L3(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q99457
ProtoNet protein and cluster: Q99457 1 Blocks protein family: IPB002164 Nucleosome assembly protein (NAP)
UniProtKB/Swiss-Prot: NP1L3_HUMAN, Q99457Similarity: Belongs to the nucleosome assembly protein (NAP) family | Gene Function
for NAP1L3
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004538
 Applied Biosystems Silencer® siRNAs for NAP1L3
 Sigma-Aldrich siRNA for NAP1L3
Sigma-Aldrich shRNA for NAP1L3
Explore Sigma-Aldrich super-pooled esiRNAs
OriGene GFP tagged cDNA clone in CMV expression vector: NM_004538
Myc/DDK tagged cDNA clone in CMV expression vector: NM_004538
untagged cDNA clone in CMV expression vector: NM_004538
Primers:  Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
OriGene genome-wide validated SYBR primer pairs: NM_004538
Genatlas biochemistry entry for NAP1L3:nucleosome assembly protein-like 3,tightly linked to DXS9901 MGI phenotypic allele  for Nap1l3 (no phenotypes)
| Pathways & Interactions
for NAP1L3
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
--1 Gene Ontology (GO) biological process term (links to tree view): About this table
|
Drugs & Compounds
for NAP1L3(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for NAP1L3
|
Transcripts
for NAP1L3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene,
Expression Assays from Applied Biosystems)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004538
Sigma-Aldrich siRNA for NAP1L3
Sigma-Aldrich shRNA for NAP1L3
Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer® siRNAs: NM_004538 REFSEQ mRNAs for NAP1L3 gene: NM_004538.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004538
OriGene GFP tagged cDNA clone in CMV expression vector: NM_004538
Myc/DDK tagged cDNA clone in CMV expression vector: NM_004538
untagged cDNA clone in CMV expression vector: NM_004538
Additional cDNA sequence: AK090772.1 AK095682.1 AK223621.1 AK315176.1 BC034954.2 BC094729.1 CR610053.1 D50370.1 5 DOTS entries: DT.92423957 DT.116325 DT.121298700 DT.121298694 DT.121298688 24/84 AceView cDNA sequences (see all 84
):NM_004538 BF594742 AI241936 AU127955 AI418649 AL119710 BG654940 AA393645 AL534617 CR610053 AL120635 AI015526 BQ637558 AI370896 AA400830 D50370 AA205224 BG699951 BX413252 AA043992 AA626771 AL536140 AV729387 AU131171
 highest scoring ESTs for NAP1L3:D50370 AA223829 AA393645 AA463421 AI207857 AI333607 AL119710 AL120635 AU127955 AU131171 Unigene Cluster for NAP1L3: Nucleosome assembly protein 1-like 3 Hs.21365 [show with all ESTs]Unigene Representative Sequence: BC094729
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000373079
|
Expression
for NAP1L3
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| NAP1L3 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for NAP1L3
1 / 2 / 3 3 probe-sets matching NAP1L3 gene Data from
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: TTCTTGTATT
SOURCE GeneReport for Unigene cluster: Hs.21365
Expression variation in blood from EXPOLDB for NAP1L3 |
Orthologs
for NAP1L3
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for NAP1L3 gene from 4 species
About this table Species with no ortholog for NAP1L3
ENSEMBL Gene Tree for NAP1L3 | Paralogs
for NAP1L3(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| Paralogs for NAP1L3 gene
- NAP1L62 NAP1L22 NAP1L52 NAP1L42 NAP1L12
|
SNPs/Variants
for NAP1L3(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
| -- |
Disorders & Mutations
for NAP1L3
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 300117
|
Medical News
for NAP1L3(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for NAP1L3 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 7 PubMed articles for NAP1L3 gene: |
Search for NAP1L3
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing NAP1L3
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing NAP1L3
(According to HUGE)
About This Section
| -- |
Specialized Databases showing NAP1L3(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| About This Section
| --
| Services
for NAP1L3(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section
| 
Products for NAP1L3:
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