NANOS2 Gene
protein-coding GIFtS : 47
GCID: GC19 M046416
nanos homolog 2 (Drosophila)
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Aliasesfor NANOS2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Nanos Homolog 2 (Drosophila) 1 2 NOS21 2 3 NOS-22 3 Nanos Homolog 22
Export aliases for NANOS2 gene to outside databases Previous GC identifers: GC19U900395 GC19M051108 GC19M042844
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Summariesfor NANOS2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: NANO2_HUMAN, P60321 Function : Plays a key role in the sexual differentiation of germ cells by promoting the male fate but suppressing thefemale fate. Represses the female fate pathways by suppressing meiosis, which in turn results in the promotion of the male fate. Maintains the suppression of meiosis by preventing STRA8 expression, which is required for premeiotic DNA replication, after CYP26B1 is decreased. Regulates the localization of the CCR4-NOT deadenylation complex to P-bodies and plays a role in recruiting the complex to trigger the degradation of mRNAs involved in meiosis. Required for the maintenance of the spermatogonial stem cell population. Not essential for the assembly of P-bodies but is required for the maintenance of their normal state (By similarity)
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Genomic Viewsfor NANOS2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000019.9 NC_018930.1 NT_011109.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the NANOS2 gene promoter: Tal-1 NRSF form 1 Lmo2 XBP-1 NRSF form 2 E47 Max FOXO4 COMP1 c-Myc Other transcription factors Search SABiosciences Chromatin IP Primers for NANOS2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NANOS2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 19q13.32 Ensembl cytogenetic band: 19q13.32 HGNC cytogenetic band: 19q13.32 NANOS2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 19 GeneLoc Exon Structure
GeneLoc location for GC19M046416: view genomic region
(about GC identifiers )
Start:
46,416,472 bp from pter
End:
46,418,036 bp from pter
Size:
1,565 bases
Orientation:
minus strand
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Proteinsfor NANOS2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: NANO2_HUMAN, P60321 (See
protein sequence )Recommended Name: Nanos homolog 2 Size : 138 amino acids; 15132 Da
Subunit : Interacts with CNOT1, CNOT3, CNOT6L, CNOT7 and CNOT9 (By similarity)
Subcellular location : Cytoplasm. Cytoplasm, P-body (By similarity). Cytoplasm, perinuclear region. Note=Localizes atP-bodies during gonocyte development (By similarity). More abundant in perinuclear region of the cytoplasm of the germ cells of the adult testis
Developmental stage : Fetal ovary and fetal testis. Present in all germ cells of seminiferous tubules of the 24-weekfetus (at protein level)
Secondary accessions : Q17R30 Q4G0P8Explore the universe of human proteins at neXtProt for NANOS2: NX_P60321 NANOS2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_001025032.1 ENSEMBL proteins: ENSP00000341021 Human Recombinant Protein Products for NANOS2: Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view) : About this table
NANOS2 for ontologies About GeneDecksing NANOS2 Antibody Products: Assay Products for NANOS2:
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Protein
Domains / Familiesfor NANOS2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
NANOS2 for domains About GeneDecksing 2 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P60321 ProtoNet protein and cluster: P60321
1 Blocks protein family : IPB008705 Nanos RNA-binding UniProtKB/Swiss-Prot: NANO2_HUMAN, P60321 Domain : The Nanos-type zinc finger is composed of two C2HC motifs, each motif binding one molecule of zinc. It isessential for the translation repression activity of the protein (By similarity) Similarity : Belongs to the nanos familySimilarity : Contains 1 nanos-type zinc finger
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Functionfor NANOS2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: NANO2_HUMAN, P60321 Function : Plays a key role in the sexual differentiation of germ cells by promoting the male fate but suppressing thefemale fate. Represses the female fate pathways by suppressing meiosis, which in turn results in the promotion of the male fate. Maintains the suppression of meiosis by preventing STRA8 expression, which is required for premeiotic DNA replication, after CYP26B1 is decreased. Regulates the localization of the CCR4-NOT deadenylation complex to P-bodies and plays a role in recruiting the complex to trigger the degradation of mRNAs involved in meiosis. Required for the maintenance of the spermatogonial stem cell population. Not essential for the assembly of P-bodies but is required for the maintenance of their normal state (By similarity)
Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view) : About this table
NANOS2 for ontologies About GeneDecksing Phenotypes: 4 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Nanos2) :
NANOS2 for phenotypes About GeneDecksing Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NANOS2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NANOS2OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: NANOS2 (NM_001029861 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for NANOS2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat NANOS2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NANOS2
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Pathways & Interactionsfor NANOS2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for NANOS2 STRING Interaction
Network Preview (showing 5 interactants - click image to see 7)5/7 Interacting proteins for NANOS2 (ENSP00000341021 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 7 )About this table Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6 ): About this table
NANOS2 for ontologies About GeneDecksing
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Drugs & Compoundsfor NANOS2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Compounds for NANOS2 available from Tocris Bioscience About this table Search CenterWatch for drugs/clinical trials and news about NANOS2 / NANO2
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Transcriptsfor NANOS2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for NANOS2 gene: NM_001029861.2 Unigene Cluster for NANOS2:
Nanos homolog 2 (Drosophila) Hs.434218 [show with all ESTs ] Unigene Representative Sequence: BC042883 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000341294 (uc002pdu.3 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NANOS2 (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NANOS2OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: NANOS2 (NM_001029861 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for NANOS2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat NANOS2
Additional cDNA sequence: BC042883.1 BC117484.1 BC117486.1
1 DOTS entry : DT.95361109
3 AceView cDNA sequences :
BC042883 BI826677 BI463423 GeneLoc Exon Structure
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Expression for NANOS2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section NANOS2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GATCTTTTGTAbout this image NANOS2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See NANOS2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for NANOS2 SOURCE GeneReport for Unigene cluster: Hs.434218 UniProtKB/Swiss-Prot: NANO2_HUMAN, P60321 Tissue specificity : Testis and ovary. Expression found in several spermatogenic stages: in cells on the periphery ofthe tubules which could correspond to spermatogonia, in spermatocytes and in round spermatids (at protein level) SABiosciences Custom PCR Arrays for NANOS2 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for NANOS2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat NANOS2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat NANOS2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat NANOS2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NANOS2
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Orthologsfor NANOS2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for NANOS2 gene from 2/11 species (see all 11 ) About this table
ENSEMBL Gene Tree for NANOS2 (if available)TreeFam Gene Tree for NANOS2 (if available)
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Paralogsfor NANOS2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for NANOS2 gene NANOS3 2 NANOS1 2 2 SIMAP similar genes for NANOS2 using alignment to 1 protein entry: NANO2_HUMAN :NANOS1 NANOS3
NANOS2 for paralogs About GeneDecksing
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Genomic Variantsfor NANOS2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 19 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for NANOS2 (46416472 - 46418036 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for NANOS2: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing NANOS2
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Disorders
/ Diseasesfor NANOS2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
NANOS2 for disorders About GeneDecksing
OMIM gene information: 608228
OMIM disorders : --1 disease for NANOS2 : About MalaCards teratoma 1 disease from the University of Copenhagen DISEASES database for NANOS2 :Spermatocytoma Export disorders for NANOS2 gene to outside databases
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Publicationsfor NANOS2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for NANOS2 gene integrated from 9 sources : (articles sorted by number of sources associating them with NANOS2) Utopia : connect your pdf to the dynamic world of online information
The highly conserved NANOS2 protein: testis-specific expression and significance for the human male reproduction. (PubMed id 19168545) 1 , 2 Kusz K.M....Jaruzelska J. (2009) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Conserved role of nanos proteins in germ cell development. (PubMed id 12947200) 1 , 3 Tsuda M....Saga Y. (2003) Conservation of a Pumilio-Nanos complex from Drosophila germ plasm to human germ cells. (PubMed id 12690449) 1 , 3 Jaruzelska J....Reijo Pera R.A. (2003) NANOS3 function in human germ cell development. (PubMed id 21421998) 2 Julaton V.T. and Reijo Pera R.A. (2011) Expression of nitric oxide synthases in keratinocytes after UVB irradiation. (PubMed id 14615895) 1 Chang H.R....Yu H.S. (2003) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002)
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External Searches for NANOS2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing NANOS2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing NANOS2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing NANOS2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for NANOS2 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for NANOS2 gene: Search GeneIP for patents involving NANOS2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor NANOS2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
OriGene Antibodies for NANOS2 Browse OriGene shRNA RFPs OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for NANOS2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for NANOS2 Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits Browse OriGene siRNAs Browse 3'-UTR reporter clones for miRNA target validation OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for NANOS2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for NANOS2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for NANOS2 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for NANOS2 OriGene Custom Protein Services for NANOS2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat NANOS2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing NANOS2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat NANOS2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat NANOS2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat NANOS2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat NANOS2
NANOS2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for NANOS2
ThermoFisher Antibodies for NANOS2
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat NANOS2
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Aliases for NANOS2
Databases for NANOS2
Disorders / Diseases for NANOS2
Domains / Families for NANOS2
Drugs / Compounds for NANOS2
Expression for NANOS2
Function for NANOS2
Genomic Views for NANOS2
Intellectual Property for NANOS2
Orthologs for NANOS2
Paralogs for NANOS2
Pathways / Interactions for NANOS2
Products for NANOS2
Proteins for NANOS2
Publications for NANOS2
Search Box for NANOS2
Summaries for NANOS2
Transcripts for NANOS2
Variants for NANOS2
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