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Aliases for NANOGP6 Gene

Subcategory (RNA class) for NANOGP6 Gene

antisense

Aliases for NANOGP6 Gene

  • Nanog Homeobox Pseudogene 6 2 3 5

External Ids for NANOGP6 Gene

ORGUL Members for NANOGP6 Gene

Previous GeneCards Identifiers for NANOGP6 Gene

  • GC10U900445
  • GC10M101538

Summaries for NANOGP6 Gene

GeneCards Summary for NANOGP6 Gene

NANOGP6 (Nanog Homeobox Pseudogene 6) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NANOGP6 Gene

Genomics for NANOGP6 Gene

Regulatory Elements for NANOGP6 Gene

Enhancers for NANOGP6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G099845 1.2 Ensembl ENCODE 11.2 -56.6 -56609 1.2 PKNOX1 ATF1 RB1 KLF17 ZBTB40 DNMT3B ZNF2 ZSCAN9 RAD21 ZNF121 DNMBP-AS1 NANOGP6 ABCC2 DNMBP EBAG9P1 GC10P099874
GH10G099944 1.2 Ensembl ENCODE dbSUPER 10 -155.7 -155659 2.1 JUN BCL11B FOSL1 GATA2 HNF4G RELB FOS RFX1 MTA2 BHLHE40 DNMBP NANOGP6 ABCC2 DNMBP-AS1
GH10G099810 0.9 ENCODE 11.9 -20.9 -20885 0.2 HDAC1 HDGF RB1 AGO1 INSM2 SIN3A DMAP1 RAD21 ZNF335 GLIS2 NANOGP6 ABCC2 CUTC GC10P099874
GH10G099833 0.6 ENCODE 11.1 -45.2 -45183 1.7 MAFG SIN3A FOSL1 SSRP1 POLR2A NFE2 FOS MAFK RBFOX2 NFE2L2 NANOGP6 ABCC2 DNMBP DNMBP-AS1 GC10P099874
GH10G099863 0.4 ENCODE 10.7 -74.6 -74643 1.1 ZNF146 JUN DNMBP NANOGP6 ABCC2 CWF19L1 GC10P099874
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NANOGP6 on UCSC Golden Path with GeneCards custom track

Genomic Location for NANOGP6 Gene

Chromosome:
10
Start:
99,788,474 bp from pter
End:
99,789,414 bp from pter
Size:
941 bases
Orientation:
Minus strand

Genomic View for NANOGP6 Gene

Genes around NANOGP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NANOGP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NANOGP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NANOGP6 Gene

Proteins for NANOGP6 Gene

Post-translational modifications for NANOGP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NANOGP6 Gene

Domains & Families for NANOGP6 Gene

Gene Families for NANOGP6 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NANOGP6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NANOGP6 Gene

Function for NANOGP6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NANOGP6 Gene

Localization for NANOGP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NANOGP6 Gene

Pathways & Interactions for NANOGP6 Gene

SuperPathways for NANOGP6 Gene

No Data Available

Interacting Proteins for NANOGP6 Gene

Gene Ontology (GO) - Biological Process for NANOGP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NANOGP6 Gene

Drugs & Compounds for NANOGP6 Gene

No Compound Related Data Available

Transcripts for NANOGP6 Gene

mRNA/cDNA for NANOGP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NANOGP6 Gene

No ASD Table

Relevant External Links for NANOGP6 Gene

GeneLoc Exon Structure for
NANOGP6
ECgene alternative splicing isoforms for
NANOGP6

Expression for NANOGP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NANOGP6 Gene

NURSA nuclear receptor signaling pathways regulating expression of NANOGP6 Gene:

NANOGP6
genes like me logo Genes that share expression patterns with NANOGP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NANOGP6 Gene

Orthologs for NANOGP6 Gene

Evolution for NANOGP6 Gene

ENSEMBL:
Gene Tree for NANOGP6 (if available)
TreeFam:
Gene Tree for NANOGP6 (if available)

No data available for Orthologs for NANOGP6 Gene

Paralogs for NANOGP6 Gene

No data available for Paralogs for NANOGP6 Gene

Variants for NANOGP6 Gene

Relevant External Links for NANOGP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NANOGP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NANOGP6 Gene

Disorders for NANOGP6 Gene

No disorders were found for NANOGP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NANOGP6 Gene

Publications for NANOGP6 Gene

  1. Eleven daughters of NANOG. (PMID: 15233988) Booth H.A. … Holland P.W. (Genomics 2004) 2 3 64

Products for NANOGP6 Gene

Sources for NANOGP6 Gene

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