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Aliases for NANOGP3 Gene

Subcategory (RNA class) for NANOGP3 Gene


Aliases for NANOGP3 Gene

  • Nanog Homeobox Pseudogene 3 2 3 5

External Ids for NANOGP3 Gene

ORGUL Members for NANOGP3 Gene

Previous GeneCards Identifiers for NANOGP3 Gene

  • GC06M053284
  • GC06U900427
  • GC06M053391

Summaries for NANOGP3 Gene

GeneCards Summary for NANOGP3 Gene

NANOGP3 (Nanog Homeobox Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for NANOGP3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NANOGP3 Gene

Genomics for NANOGP3 Gene

Regulatory Elements for NANOGP3 Gene

Enhancers for NANOGP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H053432 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.3 -14294 1.8 PKNOX1 FOXA2 MLX ARID4B YY1 FOS SP5 MXD4 REST PPARG RPL31P28 ELOVL5 NANOGP3 LOC105375095
GH06H053436 1.4 Ensembl ENCODE dbSUPER 0.4 -18.8 -18819 1.5 ATF1 FOXA2 RAD21 CHAMP1 RFX5 YY1 ZNF143 SMARCC2 FOS ATF7 NANOGP3 LOC105375095
GH06H053460 1.5 FANTOM5 Ensembl ENCODE 0.3 -45.0 -44976 7.2 HDGF PKNOX1 FOXA2 YY1 GTF3C2 GATA2 FOS ATF7 JUNB REST LOC105375095 NANOGP3
GH06H053425 0.8 dbSUPER 0.4 -9.1 -9068 4.2 PKNOX1 BMI1 BATF ATF7 ETV6 RUNX3 IKZF2 CREM CBFB CEBPB NANOGP3 LOC105375095
GH06H053416 0.4 dbSUPER 0.7 +0.2 160 4 FOXA2 HNF4A NANOGP3 RN7SKP256
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NANOGP3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NANOGP3 Gene

Genomic Locations for NANOGP3 Gene
287 bases
Minus strand

Genomic View for NANOGP3 Gene

Genes around NANOGP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NANOGP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NANOGP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NANOGP3 Gene

Proteins for NANOGP3 Gene

Post-translational modifications for NANOGP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NANOGP3 Gene

Domains & Families for NANOGP3 Gene

Gene Families for NANOGP3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NANOGP3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NANOGP3 Gene

Function for NANOGP3 Gene

Phenotypes From GWAS Catalog for NANOGP3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NANOGP3 Gene

Localization for NANOGP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NANOGP3 Gene

Pathways & Interactions for NANOGP3 Gene

SuperPathways for NANOGP3 Gene

No Data Available

Interacting Proteins for NANOGP3 Gene

Gene Ontology (GO) - Biological Process for NANOGP3 Gene


No data available for Pathways by source and SIGNOR curated interactions for NANOGP3 Gene

Drugs & Compounds for NANOGP3 Gene

No Compound Related Data Available

Transcripts for NANOGP3 Gene

mRNA/cDNA for NANOGP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NANOGP3 Gene

No ASD Table

Relevant External Links for NANOGP3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NANOGP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NANOGP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of NANOGP3 Gene:

genes like me logo Genes that share expression patterns with NANOGP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NANOGP3 Gene

Orthologs for NANOGP3 Gene

Evolution for NANOGP3 Gene

Gene Tree for NANOGP3 (if available)
Gene Tree for NANOGP3 (if available)

No data available for Orthologs for NANOGP3 Gene

Paralogs for NANOGP3 Gene

No data available for Paralogs for NANOGP3 Gene

Variants for NANOGP3 Gene

Relevant External Links for NANOGP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NANOGP3 Gene

Disorders for NANOGP3 Gene

Relevant External Links for NANOGP3

Genetic Association Database (GAD)

No disorders were found for NANOGP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NANOGP3 Gene

Publications for NANOGP3 Gene

  1. Eleven daughters of NANOG. (PMID: 15233988) Booth HA … Holland PW (Genomics 2004) 3 60

Products for NANOGP3 Gene

Sources for NANOGP3 Gene

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