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Aliases for NANOGP3 Gene

Subcategory (RNA class) for NANOGP3 Gene


Aliases for NANOGP3 Gene

  • Nanog Homeobox Pseudogene 3 2 3 5

External Ids for NANOGP3 Gene

ORGUL Members for NANOGP3 Gene

Previous GeneCards Identifiers for NANOGP3 Gene

  • GC06M053284
  • GC06U900427
  • GC06M053391

Summaries for NANOGP3 Gene

GeneCards Summary for NANOGP3 Gene

NANOGP3 (Nanog Homeobox Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NANOGP3 Gene

Genomics for NANOGP3 Gene

Regulatory Elements for NANOGP3 Gene

Enhancers for NANOGP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F053431 0.9 FANTOM5 Ensembl ENCODE 0.4 -14.1 -14133 2.1 ELF3 PKNOX1 MLX ARID4B RAD21 RARA YY1 RCOR1 FOS CREM RPL31P28 ELOVL5 NANOGP3 LOC105375095
GH06F053436 1.2 Ensembl ENCODE 0.3 -18.8 -18819 1.5 ATF1 MLX WRNIP1 SIN3A ARID4B YY1 ZNF143 FOS JUNB REST NANOGP3 LOC105375095
GH06F053447 0.2 ENCODE 0.3 -28.5 -28460 0.2 BRD4 JUND PKNOX1 PBX2 GTF2E2 LOC105375095 NANOGP3
GH06F053446 0.2 Ensembl 0.3 -27.8 -27763 0.2 HLF ZNF140 ZBTB33 MLLT1 BMI1 LOC105375095 NANOGP3
GH06F053440 0.2 Ensembl 0.3 -22.2 -22163 1.4 ELF3 MTA2 ZBED1 JUNB BMI1 IKZF1 EED NBN ETV6 ZBTB33 RPL31P28 ELOVL5 NANOGP3 LOC105375095
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around NANOGP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for NANOGP3 Gene

53,418,452 bp from pter
53,418,738 bp from pter
287 bases
Minus strand

Genomic View for NANOGP3 Gene

Genes around NANOGP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NANOGP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NANOGP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NANOGP3 Gene

Proteins for NANOGP3 Gene

Post-translational modifications for NANOGP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NANOGP3 Gene

Domains & Families for NANOGP3 Gene

Gene Families for NANOGP3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NANOGP3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NANOGP3 Gene

Function for NANOGP3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NANOGP3 Gene

Localization for NANOGP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NANOGP3 Gene

Pathways & Interactions for NANOGP3 Gene

SuperPathways for NANOGP3 Gene

No Data Available

Interacting Proteins for NANOGP3 Gene

Gene Ontology (GO) - Biological Process for NANOGP3 Gene


No data available for Pathways by source and SIGNOR curated interactions for NANOGP3 Gene

Transcripts for NANOGP3 Gene

mRNA/cDNA for NANOGP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NANOGP3 Gene

No ASD Table

Relevant External Links for NANOGP3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for NANOGP3 Gene

mRNA expression in normal human tissues for NANOGP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of NANOGP3 Gene:

genes like me logo Genes that share expression patterns with NANOGP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NANOGP3 Gene

Orthologs for NANOGP3 Gene

Evolution for NANOGP3 Gene

Gene Tree for NANOGP3 (if available)
Gene Tree for NANOGP3 (if available)

No data available for Orthologs for NANOGP3 Gene

Paralogs for NANOGP3 Gene

No data available for Paralogs for NANOGP3 Gene

Variants for NANOGP3 Gene

Relevant External Links for NANOGP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NANOGP3 Gene

Disorders for NANOGP3 Gene

Relevant External Links for NANOGP3

Genetic Association Database (GAD)

No disorders were found for NANOGP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NANOGP3 Gene

Publications for NANOGP3 Gene

  1. Eleven daughters of NANOG. (PMID: 15233988) Booth H.A. … Holland P.W. (Genomics 2004) 3 64

Products for NANOGP3 Gene

Sources for NANOGP3 Gene

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