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Aliases for NANOGP2 Gene

Aliases for NANOGP2 Gene

  • Nanog Homeobox Pseudogene 2 2 3 5
  • NANOGP4 3

External Ids for NANOGP2 Gene

Previous GeneCards Identifiers for NANOGP2 Gene

  • GC02U900703
  • GC02M223142
  • GC02M223024
  • GC02M223316

Summaries for NANOGP2 Gene

GeneCards Summary for NANOGP2 Gene

NANOGP2 (Nanog Homeobox Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NANOGP2 Gene

Genomics for NANOGP2 Gene

Regulatory Elements for NANOGP2 Gene

Enhancers for NANOGP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F222447 1.3 FANTOM5 Ensembl ENCODE 0.4 +5.0 5029 2.7 SMARCA4 GLIS1 ZNF488 MAFK ZNF623 NR2F2 TRIM28 SGPP2 LOC440934 NANOGP2
GH02F222424 1.2 Ensembl ENCODE 0.3 +26.8 26793 4.3 HDGF PKNOX1 TBL1XR1 SIN3A FEZF1 YY1 GLIS2 EGR1 SCRT2 ZNF143 LOC440934 SGPP2 NANOGP2
GH02F222433 0.9 Ensembl ENCODE 0.3 +19.2 19166 2.3 MTA2 TEAD4 BMI1 MNT TBX21 EP300 RAD51 JUND POLR2A CBX5 RNU6-619P ENSG00000261428 SGPP2 NANOGP2
GH02F222440 0.6 ENCODE 0.4 +12.4 12365 1.1 CTCF ZNF366 BHLHE40 TRIM22 WT1 ZBTB20 TRIM28 NANOGP2 SGPP2
GH02F222470 0.6 ENCODE 0.3 -17.5 -17511 0.2 ZNF580 PRDM10 FEZF1 ZNF843 TRIM28 RNU6-619P SGPP2 NANOGP2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NANOGP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for NANOGP2 Gene

Chromosome:
2
Start:
222,452,042 bp from pter
End:
222,453,486 bp from pter
Size:
1,445 bases
Orientation:
Minus strand

Genomic View for NANOGP2 Gene

Genes around NANOGP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NANOGP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NANOGP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NANOGP2 Gene

Proteins for NANOGP2 Gene

Post-translational modifications for NANOGP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NANOGP2 Gene

Domains & Families for NANOGP2 Gene

Gene Families for NANOGP2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NANOGP2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NANOGP2 Gene

Function for NANOGP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NANOGP2 Gene

Localization for NANOGP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NANOGP2 Gene

Pathways & Interactions for NANOGP2 Gene

SuperPathways for NANOGP2 Gene

No Data Available

Interacting Proteins for NANOGP2 Gene

Gene Ontology (GO) - Biological Process for NANOGP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NANOGP2 Gene

Transcripts for NANOGP2 Gene

mRNA/cDNA for NANOGP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for NANOGP2 Gene

No ASD Table

Relevant External Links for NANOGP2 Gene

GeneLoc Exon Structure for
NANOGP2
ECgene alternative splicing isoforms for
NANOGP2

Expression for NANOGP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NANOGP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of NANOGP2 Gene:

NANOGP2
genes like me logo Genes that share expression patterns with NANOGP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NANOGP2 Gene

Orthologs for NANOGP2 Gene

Evolution for NANOGP2 Gene

ENSEMBL:
Gene Tree for NANOGP2 (if available)
TreeFam:
Gene Tree for NANOGP2 (if available)

No data available for Orthologs for NANOGP2 Gene

Paralogs for NANOGP2 Gene

No data available for Paralogs for NANOGP2 Gene

Variants for NANOGP2 Gene

Relevant External Links for NANOGP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NANOGP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NANOGP2 Gene

Disorders for NANOGP2 Gene

No disorders were found for NANOGP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NANOGP2 Gene

Publications for NANOGP2 Gene

  1. Identification, cloning and expression analysis of the pluripotency promoting Nanog genes in mouse and human. (PMID: 15108323) Hart A.H. … Robb L. (Dev. Dyn. 2004) 2 3 64
  2. Eleven daughters of NANOG. (PMID: 15233988) Booth H.A. … Holland P.W. (Genomics 2004) 2 3 64
  3. Isolation of two X-linked mutants in Drosophila melanogaster which are sensitive to gamma-rays. (PMID: 414131) Nguyen T.D. … Boyd J.B. (Mutat. Res. 1978) 3 64

Products for NANOGP2 Gene

Sources for NANOGP2 Gene

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