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Aliases for NANOGP11 Gene

Aliases for NANOGP11 Gene

  • Nanog Homeobox Pseudogene 11 2 3

External Ids for NANOGP11 Gene

Previous GeneCards Identifiers for NANOGP11 Gene

  • GC06U900559
  • GC06P152959

Summaries for NANOGP11 Gene

GeneCards Summary for NANOGP11 Gene

NANOGP11 (Nanog Homeobox Pseudogene 11) is a Pseudogene.

Additional gene information for NANOGP11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NANOGP11 Gene

Genomics for NANOGP11 Gene

GeneHancer (GH) Regulatory Elements for NANOGP11 Gene

Promoters and enhancers for NANOGP11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I152634 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.2 +90.1 90127 2.9 ZNF76 ZNF2 ZNF335 GLIS2 ZNF366 SCRT2 EGR2 SP3 ZBTB11 ZNF398 SYNE1 NANOGP11
GH06I152575 Enhancer 0.9 Ensembl ENCODE 0.3 +30.0 29971 1 CEBPG FEZF1 ZEB1 HIC1 ZNF366 ZNF362 ZNF189 HLF CEBPB ZEB2 SYNE1 VIP NANOGP11
GH06I152572 Enhancer 0.9 ENCODE 0.3 +27.1 27051 0.2 ZSCAN4 INSM2 KLF17 MZF1 FEZF1 ZNF213 ZNF366 ZSCAN5C SCRT2 KLF7 FBXO5 NANOGP11 SYNE1
GH06I152552 Enhancer 0.6 ENCODE 0.4 +6.9 6851 0.1 CTCF ZNF654 TRIM22 ZNF2 RAD21 GATA3 SMC3 ZNF143 RUNX3 CHD2 NANOGP11 SYNE1
GH06I152532 Enhancer 0.5 ENCODE 0.4 -13.1 -13149 0.2 SMARCE1 ZNF217 CTBP1 GATA3 DPF2 SYNE1 NANOGP11 GC06P152451
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around NANOGP11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for NANOGP11 Gene

Genomic Locations for NANOGP11 Gene
chr6:152,545,930-152,546,984
(GRCh38/hg38)
Size:
1,055 bases
Orientation:
Plus strand
chr6:152,867,068-152,868,150
(GRCh37/hg19)

Genomic View for NANOGP11 Gene

Genes around NANOGP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NANOGP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NANOGP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NANOGP11 Gene

Proteins for NANOGP11 Gene

Post-translational modifications for NANOGP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NANOGP11 Gene

Domains & Families for NANOGP11 Gene

Gene Families for NANOGP11 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NANOGP11: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NANOGP11 Gene

Function for NANOGP11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NANOGP11 Gene

Localization for NANOGP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for NANOGP11 Gene

Pathways & Interactions for NANOGP11 Gene

SuperPathways for NANOGP11 Gene

No Data Available

Interacting Proteins for NANOGP11 Gene

Gene Ontology (GO) - Biological Process for NANOGP11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NANOGP11 Gene

Drugs & Compounds for NANOGP11 Gene

No Compound Related Data Available

Transcripts for NANOGP11 Gene

mRNA/cDNA for NANOGP11 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for NANOGP11 Gene

No ASD Table

Relevant External Links for NANOGP11 Gene

GeneLoc Exon Structure for
NANOGP11
ECgene alternative splicing isoforms for
NANOGP11

Expression for NANOGP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for NANOGP11 Gene

NURSA nuclear receptor signaling pathways regulating expression of NANOGP11 Gene:

NANOGP11
genes like me logo Genes that share expression patterns with NANOGP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for NANOGP11 Gene

Orthologs for NANOGP11 Gene

Evolution for NANOGP11 Gene

ENSEMBL:
Gene Tree for NANOGP11 (if available)
TreeFam:
Gene Tree for NANOGP11 (if available)

No data available for Orthologs for NANOGP11 Gene

Paralogs for NANOGP11 Gene

No data available for Paralogs for NANOGP11 Gene

Variants for NANOGP11 Gene

Additional Variant Information for NANOGP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NANOGP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for NANOGP11 Gene

Disorders for NANOGP11 Gene

No disorders were found for NANOGP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for NANOGP11 Gene

Publications for NANOGP11 Gene

  1. Eleven daughters of NANOG. (PMID: 15233988) Booth HA … Holland PW (Genomics 2004) 2 3 58

Products for NANOGP11 Gene

Sources for NANOGP11 Gene

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