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Aliases for NAGPA-AS1 Gene

Subcategory (RNA class) for NAGPA-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for NAGPA-AS1 Gene

  • NAGPA Antisense RNA 1 2 3
  • NAGPA Antisense RNA 1 (Non-Protein Coding) 2

External Ids for NAGPA-AS1 Gene

Summaries for NAGPA-AS1 Gene

GeneCards Summary for NAGPA-AS1 Gene

NAGPA-AS1 (NAGPA Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NAGPA-AS1 Gene

Genomics for NAGPA-AS1 Gene

Genomic Location for NAGPA-AS1 Gene

Start:
5,033,702 bp from pter
End:
5,042,971 bp from pter
Size:
9,270 bases
Orientation:
Plus strand

Genomic View for NAGPA-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NAGPA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NAGPA-AS1 Gene

No data available for Regulatory Elements for NAGPA-AS1 Gene

Proteins for NAGPA-AS1 Gene

Post-translational modifications for NAGPA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NAGPA-AS1 Gene

Domains for NAGPA-AS1 Gene

Gene Families for NAGPA-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with NAGPA-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NAGPA-AS1 Gene

Function for NAGPA-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for NAGPA-AS1 Gene

Localization for NAGPA-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NAGPA-AS1 Gene

Pathways for NAGPA-AS1 Gene

SuperPathways for NAGPA-AS1 Gene

No Data Available

Interacting Proteins for NAGPA-AS1 Gene

Gene Ontology (GO) - Biological Process for NAGPA-AS1 Gene

None

No data available for Pathways by source for NAGPA-AS1 Gene

Transcripts for NAGPA-AS1 Gene

mRNA/cDNA for NAGPA-AS1 Gene

(2) Additional mRNA sequences :

Unigene Clusters for NAGPA-AS1 Gene

NAGPA antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate NAGPA-AS1
    • Block miRNA regulation of NAGPA-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for NAGPA-AS1

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for NAGPA-AS1 Gene

    No ASD Table

    Relevant External Links for NAGPA-AS1 Gene

    GeneLoc Exon Structure for
    NAGPA-AS1
    ECgene alternative splicing isoforms for
    NAGPA-AS1

    Expression for NAGPA-AS1 Gene

    SOURCE GeneReport for Unigene cluster for NAGPA-AS1 Gene Hs.729936

    No Expression Related Data Available

    In Situ Assay Products

    No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for NAGPA-AS1 Gene

    Orthologs for NAGPA-AS1 Gene

    No data available for Orthologs and Evolution for NAGPA-AS1 Gene

    Paralogs for NAGPA-AS1 Gene

    No data available for Paralogs for NAGPA-AS1 Gene

    Variants for NAGPA-AS1 Gene

    Sequence variations from dbSNP and Humsavar for NAGPA-AS1 Gene

    SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
    rs759205 -- 5,037,956(-) TATGA(C/T)AGAAT intron-variant
    rs759206 -- 5,037,296(-) aaaaa(A/C)tccta intron-variant
    rs882294 -- 5,042,117(-) TTACC(A/G)AACCA nc-transcript-variant
    rs1108121 -- 5,041,362(+) GAGCC(A/G)CGTGG intron-variant
    rs1875220 -- 5,038,514(-) CAGGA(A/G)AATGG intron-variant

    Relevant External Links for NAGPA-AS1 Gene

    HapMap Linkage Disequilibrium report
    NAGPA-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for NAGPA-AS1 Gene

    Disorders for NAGPA-AS1 Gene

    No disorders were found for NAGPA-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for NAGPA-AS1 Gene

    Publications for NAGPA-AS1 Gene

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

    Products for NAGPA-AS1 Gene

    Sources for NAGPA-AS1 Gene

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