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Aliases for NADK Gene

Aliases for NADK Gene

  • NAD Kinase 2 3
  • Poly(P)/ATP NAD Kinase 3 4
  • EC 2.7.1.23 4 64
  • DJ283E3.1 3
  • EC 2.7.1 64

External Ids for NADK Gene

Summaries for NADK Gene

Entrez Gene Summary for NADK Gene

  • NADK catalyzes the transfer of a phosphate group from ATP to NAD to generate NADP, which in its reduced form acts as an electron donor for biosynthetic reactions (Lerner et al., 2001 [PubMed 11594753]).[supplied by OMIM, Mar 2008]

GeneCards Summary for NADK Gene

NADK (NAD Kinase) is a Protein Coding gene. Among its related pathways are Disease and Metabolism. GO annotations related to this gene include NAD+ kinase activity.

Gene Wiki entry for NADK Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NADK Gene

Genomics for NADK Gene

Genomic Location for NADK Gene

Start:
1,751,232 bp from pter
End:
1,780,514 bp from pter
Size:
29,283 bases
Orientation:
Minus strand

Genomic View for NADK Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for NADK Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NADK Gene

Regulatory Elements for NADK Gene

Proteins for NADK Gene

  • Protein details for NADK Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O95544-NADK_HUMAN
    Recommended name:
    NAD kinase
    Protein Accession:
    O95544
    Secondary Accessions:
    • A6NNN3
    • A8K296
    • B7Z434
    • F5GXR5
    • Q5QPS4
    • Q9H2P2
    • Q9H931

    Protein attributes for NADK Gene

    Size:
    446 amino acids
    Molecular mass:
    49228 Da
    Cofactor:
    Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for NADK Gene

    Alternative splice isoforms for NADK Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for NADK Gene

Proteomics data for NADK Gene at MOPED

Selected DME Specific Peptides for NADK Gene

Post-translational modifications for NADK Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys57

Domains for NADK Gene

UniProtKB/Swiss-Prot:

NADK_HUMAN
Family:
  • Belongs to the NAD kinase family.:
    • O95544
genes like me logo Genes that share domains with NADK: view

No data available for Gene Families for NADK Gene

Function for NADK Gene

Molecular function for NADK Gene

UniProtKB/Swiss-Prot BiophysicochemicalProperties: Kinetic parameters: KM=3.3 mM for ATP {ECO:0000269 PubMed:11594753}; KM=0.54 mM for NAD {ECO:0000269 PubMed:11594753}; Vmax=6.7 umol/min/mg enzyme {ECO:0000269 PubMed:11594753}; pH dependence: Optimum pH is 7.5. {ECO:0000269 PubMed:11594753}; Temperature dependence: Optimum temperature is 55 degrees Celsius. {ECO:0000269 PubMed:11594753};
UniProtKB/Swiss-Prot CatalyticActivity: ATP + NAD(+) = ADP + NADP(+).

Enzyme Numbers (IUBMB) for NADK Gene

Gene Ontology (GO) - Molecular Function for NADK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003951 NAD+ kinase activity TAS --
GO:0005515 protein binding IPI 25416956
GO:0005524 ATP binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with NADK: view

Phenotypes for NADK Gene

GenomeRNAi human phenotypes for NADK:
genes like me logo Genes that share phenotypes with NADK: view

miRNA for NADK Gene

miRTarBase miRNAs that target NADK

No data available for Animal Models , Transcription Factor Targeting and HOMER Transcription for NADK Gene

Localization for NADK Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for NADK Gene COMPARTMENTS Subcellular localization image for NADK gene
Compartment Confidence
cytosol 5
chloroplast 2
nucleus 2
mitochondrion 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for NADK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005829 cytosol TAS 11594753
genes like me logo Genes that share ontologies with NADK: view

Pathways for NADK Gene

SuperPathways for NADK Gene

genes like me logo Genes that share pathways with NADK: view

Pathways by source for NADK Gene

1 GeneGo (Thomson Reuters Life Sciences Research) pathway for NADK Gene

Interacting Proteins for NADK Gene

Gene Ontology (GO) - Biological Process for NADK Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006741 NADP biosynthetic process IEA --
GO:0006766 vitamin metabolic process TAS --
GO:0006767 water-soluble vitamin metabolic process TAS --
GO:0008152 metabolic process --
GO:0016310 phosphorylation NAS 11594753
genes like me logo Genes that share ontologies with NADK: view

Compounds for NADK Gene

(5) HMDB Compounds for NADK Gene

Compound Synonyms Cas Number PubMed IDs
Adenosine triphosphate
  • 5'-(tetrahydrogen triphosphate) Adenosine
56-65-5
ADP
  • adenosindiphosphorsaeure
58-64-0
NAD
  • 3-Carbamoyl-1-D-ribofuranosylpyridinium hydroxide 5'-ester with adenosine 5'-pyrophosphate
53-84-9
NADH
  • 1,4-Dihydronicotinamide adenine dinucleotide
58-68-4
NADP
  • Adenine-nicotinamide dinucleotide phosphate
53-59-8

(6) Novoseek inferred chemical compound relationships for NADK Gene

Compound -log(P) Hits PubMed IDs
nadp+ 77.2 2
nad+ 69.1 4
nadph 60.2 4
nadh 53 8
atp 26.3 3
genes like me logo Genes that share compounds with NADK: view

Transcripts for NADK Gene

Unigene Clusters for NADK Gene

NAD kinase:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NADK Gene

ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11a · 11b ^ 12a · 12b · 12c ^ 13 ^ 14a · 14b · 14c ^ 15 ^
SP1: - - - - - - - -
SP2: - - - - - - -
SP3: -
SP4: - -
SP5:
SP6: - - - - - - - - - -
SP7: - - - -
SP8: - - - - - - - - -
SP9: - - - - -
SP10: - - - -
SP11: - - -
SP12: - - - - -
SP13:
SP14: -
SP15:
SP16:

ExUns: 16a · 16b ^ 17a · 17b · 17c · 17d ^ 18a · 18b ^ 19 ^ 20a · 20b
SP1: - -
SP2: - -
SP3: - -
SP4: -
SP5: - - - -
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:
SP16:

Relevant External Links for NADK Gene

GeneLoc Exon Structure for
NADK
ECgene alternative splicing isoforms for
NADK

Expression for NADK Gene

mRNA expression in normal human tissues for NADK Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for NADK Gene

This gene is overexpressed in Whole Blood (9.0).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for NADK Gene

SOURCE GeneReport for Unigene cluster for NADK Gene Hs.654792

mRNA Expression by UniProt/SwissProt for NADK Gene

O95544-NADK_HUMAN
Tissue specificity: Widely expressed but not detected in skeletal muscle.
genes like me logo Genes that share expressions with NADK: view

Orthologs for NADK Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for NADK Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia NADK 36
  • 99.39 (n)
  • 99.54 (a)
NADK 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia NADK 36
  • 86.18 (n)
  • 90.09 (a)
NADK 37
  • 87 (a)
OneToOne
dog
(Canis familiaris)
Mammalia NADK 36
  • 86.77 (n)
  • 92.2 (a)
NADK 37
  • 82 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Nadk 36
  • 86.08 (n)
  • 93.74 (a)
Nadk 16
Nadk 37
  • 92 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia NADK 37
  • 79 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia NADK 37
  • 69 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Nadk 36
  • 86.16 (n)
  • 93.74 (a)
chicken
(Gallus gallus)
Aves NADK 36
  • 75.29 (n)
  • 86.84 (a)
NADK 37
  • 84 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia NADK 37
  • 83 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia nadk 36
  • 72.81 (n)
  • 80.65 (a)
zebrafish
(Danio rerio)
Actinopterygii nadka 36
  • 70.22 (n)
  • 75.36 (a)
nadka 37
  • 51 (a)
OneToMany
nadka 37
  • 78 (a)
OneToMany
nadkb 37
  • 60 (a)
OneToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP011122 36
  • 46.02 (n)
  • 33.24 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG33156 36
  • 61.5 (n)
  • 62.79 (a)
CG33156 37
  • 50 (a)
OneToMany
CG6145 37
  • 42 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes UTR1 37
  • 25 (a)
OneToMany
UTR1 39
YEF1 37
  • 29 (a)
OneToMany
rice
(Oryza sativa)
Liliopsida Os.17282 36
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes SPAC3H5.11 36
  • 46.62 (n)
  • 39.87 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 52 (a)
OneToOne
Species with no ortholog for NADK:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for NADK Gene

ENSEMBL:
Gene Tree for NADK (if available)
TreeFam:
Gene Tree for NADK (if available)

Paralogs for NADK Gene

Selected SIMAP similar genes for NADK Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with NADK: view

No data available for Paralogs for NADK Gene

Variants for NADK Gene

Sequence variations from dbSNP and Humsavar for NADK Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs4751 - 1,754,601(-) GAGAA(A/C/G)GGCTC missense, reference, nc-transcript-variant
rs7407 -- 1,753,033(-) TACCC(A/G)CTCCC synonymous-codon, reference, nc-transcript-variant
rs7796 -- 1,752,730(-) AAAAT(C/G)TCTGA utr-variant-3-prime, nc-transcript-variant
rs8841 -- 1,751,981(-) GCAAC(A/T)GTAAT utr-variant-3-prime, nc-transcript-variant
rs14390 -- 1,751,888(-) GCACC(A/G)GCAGC utr-variant-3-prime, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for NADK Gene

Variant ID Type Subtype PubMed ID
nsv10161 CNV Gain+Loss 18304495
dgv10n71 CNV Loss 21882294
dgv34n71 CNV Loss 21882294
nsv871690 CNV Gain 21882294
dgv9e1 CNV Complex 17122850
nsv871954 CNV Loss 21882294
nsv871540 CNV Gain 21882294
dgv45n71 CNV Loss 21882294
esv27786 CNV Gain 19812545
dgv10e1 CNV Complex 17122850
nsv482957 CNV Loss 15286789
dgv52n71 CNV Loss 21882294
dgv53n71 CNV Gain 21882294
nsv871560 CNV Loss 21882294
nsv436343 CNV Deletion 17901297
nsv834091 CNV Loss 17160897
nsv871903 CNV Gain+Loss 21882294
nsv871121 CNV Gain 21882294
essv725 CNV CNV 17122850
nsv870637 CNV Loss 21882294
esv2749807 CNV Deletion 23290073
esv2749918 CNV Deletion 23290073
dgv54n71 CNV Loss 21882294

Relevant External Links for NADK Gene

HapMap Linkage Disequilibrium report
NADK

Disorders for NADK Gene

(1) Novoseek inferred disease relationships for NADK Gene

Disease -log(P) Hits PubMed IDs
tuberculosis 43.3 3

Relevant External Links for NADK

Genetic Association Database (GAD)
NADK
Human Genome Epidemiology (HuGE) Navigator
NADK
genes like me logo Genes that share disorders with NADK: view

No data available for UniProtKB/Swiss-Prot for NADK Gene

Publications for NADK Gene

  1. Structural and functional characterization of human NAD kinase. (PMID: 11594753) Lerner F. … Ziegler M. (Biochem. Biophys. Res. Commun. 2001) 2 3 4 23
  2. NAD kinase levels control the NADPH concentration in human cells. (PMID: 17855339) Pollak N. … Ziegler M. (J. Biol. Chem. 2007) 3 23
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4

Products for NADK Gene

  • Addgene plasmids for NADK

Sources for NADK Gene

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