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Aliases for NAALADL2-AS3 Gene

Subcategory (RNA class) for NAALADL2-AS3 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for NAALADL2-AS3 Gene

  • NAALADL2 Antisense RNA 3 2 3 5
  • NAALADL2 Antisense RNA 3 (Non-Protein Coding) 2

External Ids for NAALADL2-AS3 Gene

Previous GeneCards Identifiers for NAALADL2-AS3 Gene

  • GC00U933264
  • GC03M174798

Summaries for NAALADL2-AS3 Gene

GeneCards Summary for NAALADL2-AS3 Gene

NAALADL2-AS3 (NAALADL2 Antisense RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for NAALADL2-AS3 Gene

Genomics for NAALADL2-AS3 Gene

Regulatory Elements for NAALADL2-AS3 Gene

Enhancers for NAALADL2-AS3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F175150 0.8 ENCODE 0.3 -35.9 -35906 1.2 PKNOX1 JUN RAD21 GATA3 CTBP1 RCOR1 FOSL2 FOS TCF7L2 SMARCC1 NAALADL2-AS3 NAALADL2-AS2
GH03F175179 0.6 ENCODE 0.2 -64.1 -64064 0.2 GATA3 CTBP1 DPF2 FOS TCF7L2 NAALADL2-AS3 NAALADL2-AS2
GH03F175266 1.2 FANTOM5 ENCODE 0.1 -153.4 -153392 4.7 PKNOX1 INSM2 BMI1 FEZF1 RAD21 RCOR1 FOS CEBPB JUNB ZHX2 NAALADL2-AS2 NAALADL2-AS3
GH03F175258 0.7 ENCODE 0.1 -144.3 -144299 2.3 PKNOX1 DPF2 RAD21 ZNF217 ZFP69B GATA3 SMARCA4 POLR2A ZNF692 FOSL2 NAALADL2-AS1 UBE2V1P2 NAALADL2-AS2 NAALADL2-AS3
GH03F175231 0.6 FANTOM5 0.1 -116.6 -116642 0.2 RFX1 BHLHE40 FEZF1 FOS NAALADL2-AS2 NAALADL2-AS3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around NAALADL2-AS3 on UCSC Golden Path with GeneCards custom track

Genomic Location for NAALADL2-AS3 Gene

Chromosome:
3
Start:
175,079,307 bp from pter
End:
175,115,242 bp from pter
Size:
35,936 bases
Orientation:
Minus strand

Genomic View for NAALADL2-AS3 Gene

Genes around NAALADL2-AS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
NAALADL2-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for NAALADL2-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for NAALADL2-AS3 Gene

Proteins for NAALADL2-AS3 Gene

Post-translational modifications for NAALADL2-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for NAALADL2-AS3 Gene

Domains & Families for NAALADL2-AS3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for NAALADL2-AS3 Gene

Function for NAALADL2-AS3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for NAALADL2-AS3 Gene

Localization for NAALADL2-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for NAALADL2-AS3 Gene

Pathways & Interactions for NAALADL2-AS3 Gene

SuperPathways for NAALADL2-AS3 Gene

No Data Available

Interacting Proteins for NAALADL2-AS3 Gene

Gene Ontology (GO) - Biological Process for NAALADL2-AS3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for NAALADL2-AS3 Gene

Transcripts for NAALADL2-AS3 Gene

mRNA/cDNA for NAALADL2-AS3 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for NAALADL2-AS3 Gene

NAALADL2 antisense RNA 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for NAALADL2-AS3 Gene

No ASD Table

Relevant External Links for NAALADL2-AS3 Gene

GeneLoc Exon Structure for
NAALADL2-AS3
ECgene alternative splicing isoforms for
NAALADL2-AS3

Expression for NAALADL2-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for NAALADL2-AS3 Gene

mRNA differential expression in normal tissues according to GTEx for NAALADL2-AS3 Gene

This gene is overexpressed in Testis (x53.0).

SOURCE GeneReport for Unigene cluster for NAALADL2-AS3 Gene:

Hs.148810
genes like me logo Genes that share expression patterns with NAALADL2-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for NAALADL2-AS3 Gene

Orthologs for NAALADL2-AS3 Gene

Evolution for NAALADL2-AS3 Gene

ENSEMBL:
Gene Tree for NAALADL2-AS3 (if available)
TreeFam:
Gene Tree for NAALADL2-AS3 (if available)

No data available for Orthologs for NAALADL2-AS3 Gene

Paralogs for NAALADL2-AS3 Gene

No data available for Paralogs for NAALADL2-AS3 Gene

Variants for NAALADL2-AS3 Gene

Sequence variations from dbSNP and Humsavar for NAALADL2-AS3 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10049218 -- 175,106,654(+) GCGGT(A/G)TAAGT intron-variant
rs111302051 -- 175,082,295(+) TGGAA(C/T)GGAAG intron-variant
rs111361199 -- 175,080,103(+) TGGGA(C/T)TACAG intron-variant
rs111448866 -- 175,113,319(+) GGTAG(A/G)GCATC intron-variant
rs111528840 -- 175,091,283(+) GTCTT(C/T)TGATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for NAALADL2-AS3 Gene

Variant ID Type Subtype PubMed ID
nsv829799 CNV gain 17160897
nsv829798 CNV gain 17160897
nsv7356 OTHER inversion 18451855
nsv471082 CNV loss 18288195

Relevant External Links for NAALADL2-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
NAALADL2-AS3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for NAALADL2-AS3 Gene

Disorders for NAALADL2-AS3 Gene

Relevant External Links for NAALADL2-AS3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
NAALADL2-AS3

No disorders were found for NAALADL2-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for NAALADL2-AS3 Gene

Publications for NAALADL2-AS3 Gene

No publications were found for NAALADL2-AS3 Gene.

Products for NAALADL2-AS3 Gene

Sources for NAALADL2-AS3 Gene

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